OrganVision: Technology for real-time visualizing and modelling of fundamental process in living organoids towards new insights into organ-specific health, disease, and recovery

Engineered heart tissue with a pharmacological off-switch as a tool to study theinfluence of cardiac work on cardiomyocyte maturation

Autorzy: Rajiven Srikantharajah, Tim Stüdemann, Christoph Manthey, Thomas Eschenhagen, Florian Weinberger
Opublikowane w: 2022
Wydawca: ISHR World Congress

Transplanted iPSC-derived cardiomyocytes actively contribute to left ventricular function

Autorzy: Tim Stüdemann, Judith Rössinger, Christoph Manthey, Birgit Geertz, Rajiven Srikantharajah, Constantin von Bibra, Aya Shibamiya, Maria Köhne, Antonius Wiehler, J. Simon Wiegert, Thomas Eschenhagen, Florian Weinberger
Opublikowane w: 2022
Wydawca: ISHR World Congress

THE TRANSLATIONAL PATH TO HEART REGENERATION: GENETIC APPROACHES

Autorzy: Florian Weinberger
Opublikowane w: 2022
Wydawca: CNIC Regeneration Symposium

Laser additive fabrication of tailored micro-optics, Marti Duocastella, Ernest Martí-Jerez, Salvatore Surdo

Autorzy: Marti Duocastella
Opublikowane w: 2022
Wydawca: SPIE Photonics West

Engineered heart tissue and optogenetics – a powerful and versatile combination

Autorzy: Karl-Felix Müller, Bangfen Pan, Julius Hansen, Julia Krause, Grit Höppner, Tim Stüdemann, Ingke Braren, Florian Weinberger, Arne Hansen, Christine E. Gee, Torsten Christ, Thomas Eschenhagen, Justus Stenzig
Opublikowane w: 2022
Wydawca: ISHR World Congress

Auxiliary Network: Scalable and agile online learning for dynamic system with inconsistently available inputs

Autorzy: Rohit Agarwal, Krishna Agarwal, Alexander Horsch, Dilip K. Prasad
Opublikowane w: International Conference on Neural Information Processing, 2022
Wydawca: Springer International Publishing

Blind reconstruction of challenging raw data outperforms commercial 3DSIM

Autorzy: I.S. Opstad, S. Acuña, S. Ströhl, F. Ströhl, B.S. Ahluwalia, K. Agarwal
Opublikowane w: 2023
Wydawca: Focus on Microscopy

Laser additive fabrication of tailored micro-optics

Autorzy: Marti Duocastella, Ernest Martí-Jerez, Salvatore Surdo
Opublikowane w: Proceedings Volume PC11989, Laser-based Micro- and Nanoprocessing XVI, 2022
Wydawca: SPIE
DOI: 10.1117/12.2608835

MUSICAL – a versatile super-resolution microscopy solution for gentle imaging of physical characteristics of biological samples

Autorzy: Sebastian Acuña and Krishna Agarwal
Opublikowane w: 2023
Wydawca: 4th International Conference On Optics, Photonics, And Lasers (OPL-2023)

GelMA hydrogel mechanics affect the collective migration of fibroblast cells

Autorzy: B. Ghosh, K. Fenton, K. Agarwal
Opublikowane w: 2023
Wydawca: TERMIS European Chapter Meeting

MUSI-tAF: autofluorescence-based super-resolution of collagen fibrils in fixed tissues for density estimation

Autorzy: B. Ghosh, S. Acuña, K. Agarwal
Opublikowane w: 2023
Wydawca: Focus on Microscopy

Contractile force of transplanted cardiomyocytes actively supports heartfunction after injury

Autorzy: Florian Weinberger
Opublikowane w: 2023
Wydawca: German Cardiac Society

A simple and flexible platform for optogenetic pacing in cardiac tissue engineering

Autorzy: Bangfen Pan, Julius Hansen, Tim Stüdemann, Florian Weinberger, Thomas Eschenhagen, Justus Stenzig
Opublikowane w: 2022
Wydawca: ISHR World Congress

Toward faster and deeper optical microscopes by combining ultrasound with light

Autorzy: Marti Duocastella
Opublikowane w: 2023
Wydawca: Spanish and Portuguese Advanced Optical Meeting (SPAOM)

OrganVision - Nanoscopic window into the life of heart

Autorzy: Giulia De Poli, Krishna Agarwal
Opublikowane w: 2022
Wydawca: AI4future

Physics-guided Loss Functions Impact Performance of Deep-learning-based Inverse-scattering-problem Solver

Autorzy: K. Agarwal, Z. Liu, M. Roy, D. K. Prasad
Opublikowane w: 2023
Wydawca: Photonics and Electromagnetics Research Symposium (PIERS)

Acousto-Optic Light Engineering for High-Speed Microscopy

Autorzy: Martí Duocastella
Opublikowane w: 2022
Wydawca: Frontiers in Lasers and Applications

Marked increase in mitochondria degradation in engineered heart tissue during reperfusion

Autorzy: Nager M, Bhujabal Z, Larsen KB, Kalstad TB, Myrmel T and Birgisdottir AB
Opublikowane w: Circulation, 2022
Wydawca: American Heart Association meeting

Human engineered heart tissue transplantation in a guinea pig chronic injury model

Autorzy: Florian Weinberger
Opublikowane w: 2023
Wydawca: International Society for Heart Research

MABNET: Master Assistant Buddy Network With Hybrid Learning for Image Retrieval

Autorzy: R. Agarwal, G. Das, S. Aggarwal, A. Horsch, D.K. Prasad
Opublikowane w: IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP), 2023
Wydawca: IEEE
DOI: 10.1109/icassp49357.2023.10094987

Guided U-Net aided Efficient Image Data Storing with Shape Preservation

Autorzy: N. Banerjee, S. Malakar, D. K. Gupta, A. Horsch, D.K. Prasad
Opublikowane w: 2023
Wydawca: Asian Conference on Pattern Recognition (ACPR2023)

Project presentation

Autorzy: Matteo Bregonzio
Opublikowane w: 2022
Wydawca: GO BEYOND 2022

Reconstructing 3D shape from 3D ThunderSTORM Point Clouds

Autorzy: S. Jadhav, S. Majhi, A.S. Chowdhury, D.K. Prasad, K. Agarwal
Opublikowane w: 2023
Wydawca: Focus on Microscopy

Quantitative phase imaging of fast dynamic events using acousto-optics and pulsed illumination

Autorzy: Christos Alexandropoulos, Martí Duocastella
Opublikowane w: 2023
Wydawca: Focus on Microscopy

Gradient Light Interference Microscopy for labelfree detection of early changes in kidney cells embedded in a soft and stiff hydrogel matrix

Autorzy: B. Ghosh, K. A. Fenton, K. Agarwal
Opublikowane w: 2023
Wydawca: Focus on Microscopy

Stem-cell based heart repair – pharmacological perspective

Autorzy: Florian Weinberger
Opublikowane w: 2022
Wydawca: ISHR World Congress

What is Good Enough Myocardial Repair, Recovery or Remission in Chronic HF? Basic Science Perspective

Autorzy: Florian Weinberger
Opublikowane w: 2022
Wydawca: U-Cars Symposium 2022

Finding an Appropriate Dose for Engineered Heart Tissue

Autorzy: Florian Weinberger
Opublikowane w: 2022
Wydawca: Cardiovascular Bioengineering Symposium

Kilohertz frequency encoded microscopy using acousto-optic deflectors

Autorzy: Andrea Marchese, Pietro Ricci, Peter Saggau, Martí Duocastella
Opublikowane w: 2023
Wydawca: Focus on Microscopy

Generation of human engineered heart tissue with a chemo- and optogenetic Off-On switch

Autorzy: Judith Rössinger, Tim Stüdemann, Aya Shibamiya, Torsten Christ, Thomas Eschenhagen, Florian Weinberger
Opublikowane w: 2022
Wydawca: ISHR World Congress

Codeset: Modelling Irregularly Sampled Time Series Without Imputation

Autorzy: Rohit Agarwal
Opublikowane w: 2023
Wydawca: Github

MiShape: 3D Shape Modelling of Mitochondria in Microscopy

Autorzy: Abhinanda R. Punnakkal, Suyog S Jadhav, Alexander Horsch, Krishna Agarwal, Dilip K. Prasad
Opublikowane w: 2023
Wydawca: Arxiv

Replication Data for: Multiple signal classification as a blind reconstruction approach for three-dimensional structured illumination microscopy

Autorzy: Ida S. Opstad
Opublikowane w: 2023
Wydawca: DataverseNO

LysoTracker Deep Red exhibits photoconversion in multi-color structured illumination microscopy

Autorzy: Ida Sundvor Opstad, Kenneth Bowitz Larsen, Åsa Birna Birgisdottir, Krishna Agarwal
Opublikowane w: 2023
Wydawca: BiorXiv
DOI: 10.1101/2023.10.29.564502

Fluorescence microscopy videos of mitochondria in H9c2 cardiomyoblasts

Autorzy: Ida S. Opstad
Opublikowane w: 2023
Wydawca: DataverseNO

"""OrganVision: An ERC funded interdisciplinary collaboration project” invited talk at IMB conference"

Autorzy: A. B. Birgisdottir
Opublikowane w: 2022
Wydawca: IMB conference

Multifocus microscopy with optically sectioned axial superresolution

Autorzy: Ströhl, Florian; Hansen, Daniel Henry; Nager Grifo, Mireia; Birgisdottir, Åsa Birna
Opublikowane w: Numer 1, 2022
Wydawca: Arxiv
DOI: 10.48550/arxiv.2206.01257

"""Monitoring mitochondria degradation in cardiac cells"" invited talk at the NORHEART seminar ""Targeting mitochondria in cardiovascular disease"""

Autorzy: A. B. Birgisdottir
Opublikowane w: 2021
Wydawca: NORHEART seminar

Tool & Video Protocol: Tool on fluorescence microscopy images of fixed cardiomyoblasts

Autorzy: Abhinanda Punakkal et al.
Opublikowane w: 2023
Wydawca: JOVE

“Monitoring degradation of mitochondria in cardiac cells”, invited talk at Annual meeting of the Scandinavian Physiological Society

Autorzy: A. B. Birgisdottir
Opublikowane w: 2021
Wydawca: Scandinavian Physiological Society

Latent Graph Attention for Enhanced Spatial Context

Autorzy: Ayush Singh, Yash Bhambhu, Himanshu Buckchash, Deepak K. Gupta, Dilip K. Prasad
Opublikowane w: Arxiv, 2023
Wydawca: Arxiv
DOI: 10.48550/arxiv.2307.04149

Fluorescence microscopy videos of mitochondria and endosomes in H9c2 cardiomyoblasts

Autorzy: Ida S. Opstad
Opublikowane w: 2023
Wydawca: DataverseNO

pNNCLR: Stochastic Pseudo Neighborhoods for Contrastive Learning based Unsupervised Representation Learning Problems

Autorzy: Momojit Biswas, Himanshu Buckchash, Dilip K. Prasad
Opublikowane w: 2023
Wydawca: Arxiv
DOI: 10.48550/arxiv.2308.06983

Summer School Course Tutorial Codeset “Interpretable DL Playground”

Autorzy: Ayush Somani
Opublikowane w: 2023
Wydawca: Github

"""Marked increase in mitochondria degradation in engineered heart tissue during reperfusion"""

Autorzy: A. B. Birgisdottir and M.N. Grifo
Opublikowane w: 2023
Wydawca: Mimisbrunnr conference

MABNET: Master Assistant Buddy Network With Hybrid Learning for Image Retrieval

Autorzy: R. Agarwal
Opublikowane w: 2023
Wydawca: Github

Modelling Irregularly Sampled Time Series Without Imputation

Autorzy: Rohit Agarwal, Aman Sinha, Dilip K. Prasad, Marianne Clausel, Alexander Horsch, Mathieu Constant, Xavier Coubez
Opublikowane w: 2023
Wydawca: Arxiv
DOI: 10.48550/arxiv.2309.08698

Paper Code: Virtual Labeling of Mitochondria in Living Cells using Physics-guided Deep Learning

Autorzy: Ayush Somani
Opublikowane w: 2022
Wydawca: Github

Arctic LLM Workshop Hands-on Tutorial Session

Autorzy: Ayush Somani
Opublikowane w: 2023
Wydawca: Github

Dense Video Captioning: A Survey of Techniques, Datasets and Evaluation Protocols

Autorzy: Qasim, Iqra; Horsch, Alexander; Prasad, Dilip K.
Opublikowane w: Numer 1, 2023
Wydawca: Arxiv
DOI: 10.48550/arxiv.2311.02538

Fluorescence microscopy and correlative brightfield videos of mitochondria and vesicles in H9c2 cardiomyoblasts

Autorzy: Ida S. Opstad, Åsa B. Birgisdottir, Krishna Agarwal
Opublikowane w: Scientific Data, Numer vol. 11, 2024, Strona(/y) Article 125, ISSN 2052-4463
Wydawca: Springer Nature
DOI: 10.1038/s41597-024-02970-5

Modulating cardiac physiology in engineered heart tissue with the bidirectional optogenetic tool BiPOLES

Autorzy: Barbora Schwarzová, Tim Stüdemann, Muhammed Sönmez, Judith Rössinger, Bangfen Pan, Thomas Eschenhagen, Justus Stenzig, J Simon Wiegert, Torsten Christ, Florian Weinberger
Opublikowane w: Pflugers Archive, European Journal of Physiology, 2023, ISSN 0031-6768
Wydawca: Springer Verlag
DOI: 10.1007/s00424-023-02869-x

Scan-less microscopy based on acousto-optic encoded illumination

Autorzy: Andrea Marchese , Pietro Ricci , Peter Saggau, Martí Duocastella
Opublikowane w: Nanophotonics, 2024, ISSN 2192-8614
Wydawca: Berlin de Gruyter
DOI: 10.1515/nanoph-2023-0616

Multifocus microscopy with optical sectioning and high axial resolution

Autorzy: Florian Ströhl, Daniel Henry Hansen, Mireia Nager Grifo, Åsa Birna Birgisdottir
Opublikowane w: Optica, Numer Vol. 9, Numer 11, 2022, Strona(/y) 1210-1218, ISSN 2334-2536
Wydawca: Optica Publishing Group
DOI: 10.1364/optica.468583

Mitochondrial dynamics and quantification of mitochondria‐derived vesicles in cardiomyoblasts using structured illumination microscopy

Autorzy: Ida S. Opstad, Gustav Godtliebsen, Balpreet Singh Ahluwalia, Truls Myrmel, Krishna Agarwal, Åsa Birna Birgisdottir
Opublikowane w: Journal of Biophotonics, Numer Volume 15, Numer 2, 2022, Strona(/y) e202100305, ISSN 1864-063X
Wydawca: Wiley - VCH Verlag GmbH & CO. KGaA
DOI: 10.1002/jbio.202100305

3D refractive index reconstruction from phaseless coherent optical microscopy data using multiple scattering-based inverse solvers - a study

Autorzy: Yingying Qin, Ankit Butola, Krishna Agarwal
Opublikowane w: Inverse Problems, Numer volume 40, no. 1, 2023, Strona(/y) article 015003, ISSN 0266-5611
Wydawca: Institute of Physics Publishing
DOI: 10.1088/1361-6420/ad0c29

Viewing life without labels under optical microscopes

Autorzy: Biswajoy Ghosh, Krishna Agarwal
Opublikowane w: Communication Biology, Numer vol. 6, 2023, Strona(/y) article number 559, ISSN 2399-3642
Wydawca: Springer Nature
DOI: 10.1038/s42003-023-04934-8

Analyzing Mitochondrial Morphology Through Simulation Supervised Learning

Autorzy: Abhinanda Ranjit Punnakkal, Gustav Godtliebsen, Ayush Somani, Sebastian Andres Acuna Maldonado, Åsa Birna Birgisdottir, Dilip K. Prasad, Alexander Horsch, and Krishna Agarwal
Opublikowane w: Journal of Visualized Experiments, 2023, ISSN 1940-087X
Wydawca: MYJoVE Corporation

High-resolution visualization and assessment of basal and OXPHOS-induced mitophagy in H9c2 cardiomyoblasts

Autorzy: Gustav Godtliebsen, Kenneth Bowitz Larsen, Zambarlal Bhujabal, Ida S Opstad, Mireia Nager, Abhinanda R Punnakkal, Trine B Kalstad, Randi Olsen, Trine Lund, Dilip K Prasad, Krishna Agarwal, Truls Myrmel, Asa Birna Birgisdottir
Opublikowane w: Autophagy, Numer vol. 19, issue 10, 2023, Strona(/y) 2769-2788, ISSN 1554-8627
Wydawca: Landes Bioscience
DOI: 10.1080/15548627.2023.2230837

Video-rate quantitative phase imaging with dynamic acousto-optic defocusing

Autorzy: Christos Alexandropoulos, Martí Duocastella
Opublikowane w: Optics and Lasers in Engineering, Numer Volume 169, October 2023, 2023, Strona(/y) article 107692, ISSN 0143-8166
Wydawca: Elsevier BV
DOI: 10.1016/j.optlaseng.2023.107692

Virtual labeling of mitochondria in living cells using correlative imaging and physics-guided deep learning

Autorzy: Ayush Somani, Arif Ahmed Sekh, Ida S. Opstad, Åsa Birna Birgisdottir, Truls Myrmel, Balpreet Singh Ahluwalia, Alexander Horsch, Krishna Agarwal, Dilip K. Prasad
Opublikowane w: Biomedical Optics Express, Numer Vol. 13, Numer 10, 2022, Strona(/y) 5495-5516, ISSN 2156-7085
Wydawca: The Optical Society
DOI: 10.1364/boe.464177

Reconstructing 3D Geometries of sub-cellular structures from SMLM clouds

Autorzy: S. Jadhav
Opublikowane w: 2023
Wydawca: UiT The Arctic University of Norway

Multiple Signal Classification Algorithm: A computational microscopy tool for fluorescence microscopy

Autorzy: Sebastián Andrés Acuña Maldonado
Opublikowane w: 2023
Wydawca: MUNIN, UiT

Presenting CODS (Cell Organelle Dynamic Simulation)

Autorzy: Aaron Celeste
Opublikowane w: 2023
Wydawca: UiT The Arctic University of Norway

Study of mitochondrial transfer in hiPSC derived cardiomyocytes and engineered heart tissue

Autorzy: Kristiana Imsa
Opublikowane w: 2023
Wydawca: UiT The Arctic University of Norway

Encoded illumination for high-speed optical microscopy

Autorzy: Eva Maria Torres-Riera
Opublikowane w: 2023
Wydawca: Universitat Politecnica de Catalunya

Rezultaty

Publikacje

Udostępnij tę stronę

Pobierz