OrganVision: Technology for real-time visualizing and modelling of fundamental process in living organoids towards new insights into organ-specific health, disease, and recovery

SAM for Robust Mitochondria Instance Segmentation in Fluorescence Microscopy

Autorzy: Jadhav, S., Prasad, D. K., & Agarwal, K.
Opublikowane w: Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, 2026
Wydawca: IEEE

Faster and deeper laser materials processing with ultrasound

Autorzy: Marti Duocastella
Opublikowane w: The 9th International Congress on Laser Advanced Materials Processing, LAMP 2025, 2025
Wydawca: LAMP

Engineered heart tissue with a pharmacological off-switch as a tool to study theinfluence of cardiac work on cardiomyocyte maturation

Autorzy: Rajiven Srikantharajah, Tim Stüdemann, Christoph Manthey, Thomas Eschenhagen, Florian Weinberger
Opublikowane w: 2022, Strona(/y) The submissions were abstract only and are open access.
Wydawca: ISHR World Congress

Forward modeling of mesoscopic imaging with radiative transfer equation

Autorzy: Y. Qin, Y. Zhong, and K. Agarwal
Opublikowane w: Focus on Microscopy, 2025
Wydawca: Focus on Microscopy

Transplanted iPSC-derived cardiomyocytes actively contribute to left ventricular function

Autorzy: Tim Stüdemann, Judith Rössinger, Christoph Manthey, Birgit Geertz, Rajiven Srikantharajah, Constantin von Bibra, Aya Shibamiya, Maria Köhne, Antonius Wiehler, J. Simon Wiegert, Thomas Eschenhagen, Florian Weinberger
Opublikowane w: 2022, Strona(/y) The submissions were abstract only and are open access.
Wydawca: ISHR World Congress

Adaption of Subspace Based Optimization Method for Dark Field Microscopy Data

Autorzy: Yingying Qin, Ankit Butola, Krishna Agarwal
Opublikowane w: 2024 IEEE International Symposium on Antennas and Propagation and INC/USNC‐URSI Radio Science Meeting (AP-S/INC-USNC-URSI), 2024, Strona(/y) 927-928
Wydawca: IEEE
DOI: 10.1109/ap-s/inc-usnc-ursi52054.2024.10685990

Cardiac Repair Mechanisms - Insights from Opto- and Chemogenetic Approaches

Autorzy: Florian Weinberger
Opublikowane w: ICGEB, Seminar Series, 2025
Wydawca: ICGEB

THE TRANSLATIONAL PATH TO HEART REGENERATION: GENETIC APPROACHES

Autorzy: Florian Weinberger
Opublikowane w: 2022
Wydawca: CNIC Regeneration Symposium

Development of multimodal Rayleigh light-sheet and Frequency-encoded Microscopy for label-free chemical imaging of highly dynamic biological systems

Autorzy: D. Bhattacharya, A. Courtier, A. Rowlings, S. Lane, Laura Rodríguez, B. Creith, M. Duocastella, S. Mahajan
Opublikowane w: 2025, 2025
Wydawca: Focus on Microscopy

Practical challenges in inverse scattering for RI reconstruction with label-free coherent microscopy

Autorzy: Yingying Qin
Opublikowane w: Photonics & Electromagnetics Research Symposium (PIERS 2026), 2026
Wydawca: PIERS

The design space of RI reconstruction for label-free optical microscopy

Autorzy: Y. Huang, Y. Qin, Y. Zhong and K. Agarwal
Opublikowane w: Bioscopy Conference, 2026
Wydawca: UiT The Arctic University of Norway

Engineered heart tissue and optogenetics – a powerful and versatile combination

Autorzy: Karl-Felix Müller, Bangfen Pan, Julius Hansen, Julia Krause, Grit Höppner, Tim Stüdemann, Ingke Braren, Florian Weinberger, Arne Hansen, Christine E. Gee, Torsten Christ, Thomas Eschenhagen, Justus Stenzig
Opublikowane w: 2022, Strona(/y) The submissions were abstract only and are open access.
Wydawca: ISHR World Congress

Artificial intelligence solution for microscopy and nanoscopy

Autorzy: Krishna Agarwal
Opublikowane w: CEDAS Conference, Numer No abstracts was asked., 2021
Wydawca: University of Bergen

Haphazard Inputs as Images in Online Learning

Autorzy: Rohit Agarwal, Aryan Dessai, Arif Ahmed Sekh, Krishna Agarwal, Alexander Horsch, Dilip K. Prasad
Opublikowane w: 2025 International Joint Conference on Neural Networks (IJCNN), 2025, Strona(/y) 1-9
Wydawca: IEEE
DOI: 10.1109/ijcnn64981.2025.11228356

3D refractive index imaging from coherent label-free microscopy: inverse scattering reconstruction and the influence of illumination modes

Autorzy: Yingying Qin, Krishna Agarwal
Opublikowane w: Quantitative Phase Imaging XII, 2026, Strona(/y) 44
Wydawca: SPIE
DOI: 10.1117/12.3079110

Tissue Engineering und Stammzellen am Herz

Autorzy: Florian Weinberger
Opublikowane w: Annual meeting German Transplantation Society, 2022
Wydawca: Annual meeting German Transplantation Society

Computational PSF Estimation Enables Aberration-Free Deconvolution

Autorzy: F. Niknam, K. Agarwal
Opublikowane w: Focus on Microscopy 2025, 2025
Wydawca: Focus on Microscopy

Ultrasound-enabled light focusing for enhanced laser materials processing

Autorzy: Marti Duocastella
Opublikowane w: COLA 2024, 17th International Conference on Laser Ablation, 2024
Wydawca: MITOS S.A.

Biomimetic hydrogel topology facilitates cell plasticity via actin remodeling to modulate cell motility: A multimodal optical imaging-based evaluation

Autorzy: Ghosh, B. and Agarwal
Opublikowane w: TERMIS 2025, 2025
Wydawca: TERMIS

Computational Microscopy

Autorzy: Krishna Agarwal
Opublikowane w: Bioscopy Conference, 2026
Wydawca: UiT

Blind reconstruction of challenging raw data outperforms commercial 3DSIM

Autorzy: I.S. Opstad, S. Acuña, S. Ströhl, F. Ströhl, B.S. Ahluwalia, K. Agarwal
Opublikowane w: 2023
Wydawca: Focus on Microscopy

Monitoring mitochondria turnover and transfer in cardiac cells

Autorzy: Åsa B. Birgisdottir
Opublikowane w: Bioscopy Conference, 2026
Wydawca: UiT

Laser additive fabrication of tailored micro-optics

Autorzy: Marti Duocastella, Ernest Martí-Jerez, Salvatore Surdo
Opublikowane w: Proceedings Volume PC11989, Laser-based Micro- and Nanoprocessing XVI, 2022, Strona(/y) The submissions are abstract only and open access. The videos of talks are on demand.
Wydawca: SPIE
DOI: 10.1117/12.2608835

MUSICAL – a versatile super-resolution microscopy solution for gentle imaging of physical characteristics of biological samples

Autorzy: Sebastian Acuña and Krishna Agarwal
Opublikowane w: 2023
Wydawca: 4th International Conference On Optics, Photonics, And Lasers (OPL-2023)

Illumination Mode Effects in Three-dimensional Inverse Scattering for Label-free Optical Imaging

Autorzy: Y. Qin, Y. Zhong and K. Agarwal
Opublikowane w: Photonics & Electromagnetics Research Symposium (PIERS 2026), 2026
Wydawca: PIERS

Reconstruction of Objects at Cell Scale from Microscope Images with Inverse Scattering Algorithm

Autorzy: Yingying Qin, Yu Zhong, Krishna Agarwal
Opublikowane w: 2025 International Conference on Electromagnetics in Advanced Applications (ICEAA), 2025, Strona(/y) 0314-0314
Wydawca: IEEE
DOI: 10.1109/iceaa65662.2025.11305969

How optical microscopes can shape the future of nanoscience

Autorzy: Marti Duocastella
Opublikowane w: Capita Selecta 2025-2026, 2026
Wydawca: KU Lueven

NorViVQA: Visual Question Answering for Visually Impaired in Norwegian Language

Autorzy: Pal, R., Kar, S., & Prasad, D. K.
Opublikowane w: Proceedings of the Symposium of the Norwegian AI Society 2025, 2025
Wydawca: Norwegian AI Society

Adaptation and performance of well-known non-linear inverse solvers in optical microscopy

Autorzy: Yingying Qin, Ankit Butola, Krishna Agarwal
Opublikowane w: 2024 IEEE International Symposium on Antennas and Propagation and INC/USNC‐URSI Radio Science Meeting (AP-S/INC-USNC-URSI), 2024, Strona(/y) 1147-1148
Wydawca: IEEE
DOI: 10.1109/ap-s/inc-usnc-ursi52054.2024.10687253

MUSICAL: a family of computational techniques for fluorescence nanoscopy

Autorzy: Sebastian Acuña and Krishna Agarwal
Opublikowane w: Focus on Microscopy 2023, 2023
Wydawca: Focus on Microscopy

3D refractive index reconstruction from phaseless coherent label-free imaging

Autorzy: Y. Qin, A. Butola, Y. Zhong, and K. Agarwal
Opublikowane w: Focus on Microscopy 2025, 2025
Wydawca: Focus on Microscopy

Forward and Inverse Modeling of Mesoscopic Optical Microscopy Using the Radiative Transfer Equation

Autorzy: Y. Qin, K. Agarwal and Y. Zhong
Opublikowane w: Photonics & Electromagnetics Research Symposium (PIERS 2026), 2026
Wydawca: PIERS

Computational Adaptive Optics for Thick Tissue Microscopy via Linear Bayesian Modeling of Anisotropic Scattering

Autorzy: F. Niknam, K. Agarwal
Opublikowane w: Focus on Microscopy 2026, 2026
Wydawca: Focus on Microscopy

Shape based forward solver for multi-nested body in label-free microscopy

Autorzy: Y. Huang, Y. Qin and K. Agarwal
Opublikowane w: Focus on Microscopy, 2025
Wydawca: Focus on Microscopy

Fast and High-Fidelity Deconvolution Enabled by Modified Richardson-Lucy Algorithm

Autorzy: F. Niknam, K. Agarwal
Opublikowane w: Focus on Microscopy 2025, 2025
Wydawca: Focus on Microscopy

Live measurement of cancer cell motility and plasticity by label-free imaging of intracellular actin dynamics using gradient light interference microscopy

Autorzy: Ghosh, B. and Agarwal
Opublikowane w: Focus on Microscopy 2025, 2025
Wydawca: Focus on Microscopy

MUSI-tAF: autofluorescence-based super-resolution of collagen fibrils in fixed tissues for density estimation

Autorzy: B. Ghosh, S. Acuña, K. Agarwal
Opublikowane w: 2023
Wydawca: Focus on Microscopy

Pluripotent stem cell-based heart repair

Autorzy: Florian Weinberger
Opublikowane w: TRON, Translational Oncology, curATalk Seminar Series, 2024
Wydawca: TRON

Preliminary Test Study on RI Reconstruction Performance with Label-free Microscope Data by Inverse Scattering Algorithms

Autorzy: Y. Qin, A. Butola, and K. Agarwal
Opublikowane w: Photonics & Electromagnetics Research Symposium (PIERS 2024), 2024
Wydawca: PIERS

MUS-CARS: development of a computational resolution enhancement towards label-free chemical imaging

Autorzy: D. Bhattacharya, D. Lamparte, K. Agarwal, S. Willaime-Morawek, S. Mahajan
Opublikowane w: Focus on Microscopy 2026, 2026
Wydawca: Focus on Microscopy

Contractile force of transplanted cardiomyocytes actively supports heartfunction after injury

Autorzy: Florian Weinberger
Opublikowane w: 2023
Wydawca: German Cardiac Society

A simple and flexible platform for optogenetic pacing in cardiac tissue engineering

Autorzy: Bangfen Pan, Julius Hansen, Tim Stüdemann, Florian Weinberger, Thomas Eschenhagen, Justus Stenzig
Opublikowane w: 2022, Strona(/y) The submissions were abstract only and are open access.
Wydawca: ISHR World Congress

Evaluating LLM-as-a-Judge for Medical Term Simplification

Autorzy: Buhnila, I., Sinha, A., Agarwal, R., Prasad, D. K., & Constant, M
Opublikowane w: ACL BioNLP, 2026
Wydawca: ACL

Toward faster and deeper optical microscopes by combining ultrasound with light

Autorzy: Marti Duocastella
Opublikowane w: 2023
Wydawca: Spanish and Portuguese Advanced Optical Meeting (SPAOM)

OrganVision - Nanoscopic window into the life of heart

Autorzy: Giulia De Poli, Krishna Agarwal
Opublikowane w: 2022
Wydawca: AI4future

Inverse scattering based 3D refractive index imaging: modeling, reconstruction and illumination effects

Autorzy: Y. Qin and K. Agarwal
Opublikowane w: XXXVIth URSI General Assembly and Scientific Symposium (URSI GASS 2026), 2026
Wydawca: URSI

Physics-guided Loss Functions Impact Performance of Deep-learning-based Inverse-scattering-problem Solver

Autorzy: K. Agarwal, Z. Liu, M. Roy, D. K. Prasad
Opublikowane w: 2023
Wydawca: Photonics and Electromagnetics Research Symposium (PIERS)

Stem cell-derived cardiomyocyte transplantation – pharmacological considerations

Autorzy: Florian Weinberger
Opublikowane w: ISHR World Congress, 2022
Wydawca: ISHR

Challenges and Role of Federated Learning in Microscopy Data Analysis

Autorzy: A. A. Sekh
Opublikowane w: Bioscopy Conference, 2026
Wydawca: UiT The Arctic University of Norway

Acousto-Optic Light Engineering for High-Speed Microscopy

Autorzy: Martí Duocastella
Opublikowane w: 2022
Wydawca: Frontiers in Lasers and Applications

Encoded light for high-speed optical microscopy

Autorzy: Marti Duocastella
Opublikowane w: 12th International Weber Symposium, 2025
Wydawca: Istituto Italiano di Tecnologia

Human engineered heart tissue transplantation in a guinea pig chronic injury model

Autorzy: Florian Weinberger
Opublikowane w: 2023
Wydawca: International Society for Heart Research

Acousto-Optic Deflector–Based Structured Illumination and Frequency-Encoded Multiphoton Microscopy for Scanless Imaging of Biological Tissues

Autorzy: Martin Skorsetz, Aisada König, Grzegorz Rieger, Martí Duocastella, Karsten König
Opublikowane w: Focus on Microscopy 2026, 2026
Wydawca: Focus on Microscopy

Generative Adversarial Networks for Virtual Fluorescent Staining

Autorzy: Lorenzo Venieri
Opublikowane w: 24th International Conference on Group Decision and Negotiation, 2024
Wydawca: 24th International Conference on Group Decision and Negotiation

MABNET: Master Assistant Buddy Network With Hybrid Learning for Image Retrieval

Autorzy: R. Agarwal, G. Das, S. Aggarwal, A. Horsch, D.K. Prasad
Opublikowane w: IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP), 2023
Wydawca: IEEE
DOI: 10.1109/icassp49357.2023.10094987

On Generalization of 3D Generative Models

Autorzy: Bhansal, Arushika, Abhinanda Ranjit Punnakkal, and Dilip K. Prasad
Opublikowane w: AAI Workshop 2025, 2025
Wydawca: AAI Workshop 2025

Cardiac Repair Mechanisms - Insights from Opto- and Chemogenetic Approaches

Autorzy: Florian Weinberger
Opublikowane w: NIH PCTC Cardiovascular Bioengineering Symposium, 2025
Wydawca: NIH

Adaptation of Inverse Scattering Algorithms for 3D Refractive Index Reconstruction with Coherent Label-free Microscope Data

Autorzy: Y. Qin, A. Butola, and K. Agarwal
Opublikowane w: Photonics & Electromagnetics Research Symposium PIERS 2024, 2024
Wydawca: PIERS

Deep imaging in scattering media using ultrasonic endoscopes

Autorzy: Marti Duocastella
Opublikowane w: Bioscopy Conference, 2026
Wydawca: UiT

Pluripotent stem cell-based heart repair

Autorzy: Florian Weinberger
Opublikowane w: Cardioascona 2024, 2024
Wydawca: Ascona

Analysing the interaction between cardiomyocyte work and cell-cycle with human stem cell derived engineered heart tissue

Autorzy: Nancy Shehata
Opublikowane w: Cardiovascular Bioengineering Symposium, 2025
Wydawca: Cardiovascular Bioengineering Symposium

The quest for the perfect microscope: fast, label-free and deep

Autorzy: Marti Duocastella
Opublikowane w: Imaging Across Scales- From Molecules to Humans, Southampton, UK, 2024
Wydawca: University of Southampton

AI for Biological problems: Challenges, Solutions, and Lessons from Microscopy and Life-Science Applications

Autorzy: Dilip K. Prasad
Opublikowane w: Bioscopy Conference, 2026
Wydawca: UiT

Label-free chemical imaging with computerised super-resolution method to explore demyelination in Alzheimer’s Disease

Autorzy: Dipanjan Bhattacharya
Opublikowane w: ARUK Annual meeting 2025, 2025
Wydawca: ARUK

Shaping light with sound for fast and deep 3D imaging

Autorzy: Marti Duocastella
Opublikowane w: SPIE Defense + Security, Washington DC, USA, 2026
Wydawca: SPIE

Guided U-Net aided Efficient Image Data Storing with Shape Preservation

Autorzy: N. Banerjee, S. Malakar, D. K. Gupta, A. Horsch, D.K. Prasad
Opublikowane w: 2023
Wydawca: Asian Conference on Pattern Recognition (ACPR2023)

Shape-based Forward Modeling via SIEs for Label-free Microscopy

Autorzy: Y. Huang, Y. Qin and K. Agarwal
Opublikowane w: Photonics & Electromagnetics Research Symposium, 2025
Wydawca: PIERS

Project presentation

Autorzy: Matteo Bregonzio
Opublikowane w: 2022
Wydawca: GO BEYOND 2022

Reconstructing 3D shape from 3D ThunderSTORM Point Clouds

Autorzy: S. Jadhav, S. Majhi, A.S. Chowdhury, D.K. Prasad, K. Agarwal
Opublikowane w: 2023
Wydawca: Focus on Microscopy

Development of a label-free computational resolution enhancement method towards biomedical applications

Autorzy: D. Bhattacharya
Opublikowane w: Bioscopy Conference, 2026
Wydawca: UiT

Cardiac Repair Mechanisms - Insights from Opto- and Chemogenetic Approaches

Autorzy: Florian Weinberger
Opublikowane w: McEwen Stem Cell Insitute, Seminar Series, 2025
Wydawca: McEwen Stem Cell Institute

Quantitative phase imaging of fast dynamic events using acousto-optics and pulsed illumination

Autorzy: Christos Alexandropoulos, Martí Duocastella
Opublikowane w: 2023
Wydawca: Focus on Microscopy

Stem Cell-Derived Engineered Heart Tissue Develops in the Absence of Contractility

Autorzy: C. Manthey, T. Stüdemann, A. Shibamiya, M. Köhne, G. Penalosa Ruiz, J. Rössinger, R. Srikantharajah, C. Schulz, T. Christ, T. Eschenhagen, F. Weinberger
Opublikowane w: Annual Meeting of the German Cardiac Society, 2023
Wydawca: Clinical Research in Cardiology

No Imputation Needed: A Switch Approach to Irregularly Sampled Time Series

Autorzy: Rohit Agarwal, Aman Sinha, Ayan Vishwakarma, Xavier Coubez, Marianne Clausel, Mathieu Constant, Alexander Horsch, Dilip K. Prasad
Opublikowane w: NeurIPS 2025 Workshop, 2025
Wydawca: NeurIPS 2025 Workshop

Multimodal Femtosecond Fiber Laser Microscopy of Engineered Heart Tissues with Acousto-Optic Deflectors

Autorzy: K König, M Duocastella, M Skorsetz, D Pankin, G Rieger, F Weinberger, N Shehata, A König
Opublikowane w: Focus on Microscopy 2025, 2025
Wydawca: Focus on Microscopy

Toward Clinical 3D Pathology: Opportunities and Technological Challenges in Light Microscopy

Autorzy: F. Niknam, Y. Anbarestani
Opublikowane w: Bioscopy Conference, 2026
Wydawca: UiT The Arctic University of Norway

Intercellular transfer of cardiac mitochondria evaluated by high-sensitivity 3D imaging cytometry, high-resolution microscopy and high-throughput cell respirometry

Autorzy: Kenneth B. Larsen, Mauro Calvoli, Mireia Nager, Trine B. Kalstad and Asa B. Birgisdottir
Opublikowane w: Cell Press Symposium: Multifaceted Mitochondria, 2026
Wydawca: Cell Press

Cardiac Work Inhibits Cell Cycle Activity in Engineered Heart Tissue

Autorzy: R. Srikantharajah, N. Shehata, T. Stüdemann, C. Manthey, T. Eschenhagen, F. Weinberger
Opublikowane w: The Thoracic and Cardiovascular Surgeon, 56th Annual Meeting of the German Society for Pediatric Cardiology (DGPK), 2024
Wydawca: Georg Thieme Verlag KG
DOI: 10.1055/s-0044-1780731

Modified Richardson-Lucy Algorithm enables High-Fidelity and Fast Deconvolution

Autorzy: F. Niknam, K. Agarwal
Opublikowane w: BioPhysics Symposium, 2024
Wydawca: UiT The Arctic University of Norway

High-Fidelity Volumetric Tissue Microscopy: Integrating Computational Adaptive Optics with Accelerated Deconvolution

Autorzy: F. Niknam, K. Agarwal
Opublikowane w: Bioscopy Conference, 2026
Wydawca: UiT The Arctic University of Norway

Pluripotent stem cell-based heart repair

Autorzy: Florian Weinberger
Opublikowane w: Queen Mary University, London Cardiovascular Seminar Series, 2024
Wydawca: Queen Mary University

Toward Reliable CIE Inversion for Optical Microscopy: A Framework for Hyper-parameter Selection and Efficient Reconstruction

Autorzy: Y. Huang, Y. Qin, Y. Zhong and K. Agarwal
Opublikowane w: Photonics & Electromagnetics Research Symposium (PIERS 2025), 2025
Wydawca: PIERS

Hedging Is Not All You Need: A Simple Baseline for Online Learning Under Haphazard Inputs

Autorzy: Himanshu Buckchash, Momojit Biswas, Rohit Agarwal, Dilip K. Prasad
Opublikowane w: ICASSP 2025 - 2025 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP), 2026, Strona(/y) 1-5
Wydawca: IEEE
DOI: 10.1109/icassp49660.2025.10889697

Gradient Light Interference Microscopy for labelfree detection of early changes in kidney cells embedded in a soft and stiff hydrogel matrix

Autorzy: B. Ghosh, K. A. Fenton, K. Agarwal
Opublikowane w: 2023
Wydawca: Focus on Microscopy

Label-free multimodal femtosecond fiber laser microscopy of organoids with acousto-optic deflectors

Autorzy: Karsten König, Aisada König, Dmitry Pankin, Martin Skorsetz, Florian Weinberger, Nancy Shehata, Krishna Agarwal, Martí Duocastella
Opublikowane w: Multiphoton Microscopy in the Biomedical Sciences XXV, 2025, Strona(/y) 42
Wydawca: SPIE
DOI: 10.1117/12.3039099

A Privacy-Preserving Approach to Data and Artificial Intelligence

Autorzy: Matteo Bregonzio
Opublikowane w: Bioscopy Conference, 2026
Wydawca: UiT

Creating In Vitro Kidney Glomerular Microenvironment In 3d Hydrogels For Studying Chronic Kidney Diseases

Autorzy: Ghosh, B., K Fenton, K Agarwal
Opublikowane w: Tissue Engineering Part A, 2024
Wydawca: Sage Journals

Analysing the interaction between cardiomyocyte work and cell-cycle with human stem cell derived engineered heart tissue

Autorzy: Nancy Shehata
Opublikowane w: Gordon Research Conference - Cardiac Regulatory Mechanism, 2024
Wydawca: Gordon Research Conference - Cardiac Regulatory Mechanism

A Blind Deconvolution Approach for Wide-Field Microscopy

Autorzy: Farhad Niknam, Krishna Agarwal
Opublikowane w: Optica Imaging Congress 2024 (3D, AOMS, COSI, ISA, pcAOP), 2024, Strona(/y) JF2A.6
Wydawca: Optica Publishing Group
DOI: 10.1364/3d.2024.jf2a.6

Stem-cell based heart repair – pharmacological perspective

Autorzy: Florian Weinberger
Opublikowane w: 2022, Strona(/y) The submissions were abstract only and are open access.
Wydawca: ISHR World Congress

Towards a Physics-Informed Deep Learning Approach for 3D Phaseless Microscopy

Autorzy: Nicola Cuzzocrea, Nadia Mammone, Cosimo Ieracitano, Yingying Qin, Krishna Agarwal, Martina T. Bevacqua
Opublikowane w: 2026 IEEE MTT-S International Microwave Biomedical Conference (IMBioC), 2026, Strona(/y) 1-3
Wydawca: IEEE
DOI: 10.1109/imbioc69142.2026.11541160

Computational modeling of light transport for mesoscopic optical microscopy

Autorzy: Y. Qin, Y. Zhong and K. Agarwal
Opublikowane w: Bioscopy conference, 2026
Wydawca: UiT The Arctic University of Norway

Controlling light with sound for enhanced materials processing

Autorzy: Martí Duocastella
Opublikowane w: Laser Applications in Microelectronic and Optoelectronic Manufacturing (LAMOM) XXIX, Numer Abstract is open access, 2024, Strona(/y) 27
Wydawca: SPIE
DOI: 10.1117/12.3001039

What is Good Enough Myocardial Repair, Recovery or Remission in Chronic HF? Basic Science Perspective

Autorzy: Florian Weinberger
Opublikowane w: 2022
Wydawca: U-Cars Symposium 2022

Finding an Appropriate Dose for Engineered Heart Tissue

Autorzy: Florian Weinberger
Opublikowane w: 2022
Wydawca: Cardiovascular Bioengineering Symposium

Kilohertz frequency encoded microscopy using acousto-optic deflectors

Autorzy: Andrea Marchese, Pietro Ricci, Peter Saggau, Martí Duocastella
Opublikowane w: 2023
Wydawca: Focus on Microscopy

Cardiac tissue engineering – opportunities for cardiac regeneration

Autorzy: Florian Weinberger
Opublikowane w: CNIC Regeneration Symposium, 2022
Wydawca: CNIC

Analysing the interaction between cardiomyocyte work and cell-cyclehuman stem cell derived engineered heart tissue

Autorzy: Nancy Shehata
Opublikowane w: Cardiovascular Bioengineering Symposium, XXV ISHR World Congress, 2025
Wydawca: ISHR

Generation of human engineered heart tissue with a chemo- and optogenetic Off-On switch

Autorzy: Judith Rössinger, Tim Stüdemann, Aya Shibamiya, Torsten Christ, Thomas Eschenhagen, Florian Weinberger
Opublikowane w: 2022, Strona(/y) The submissions were abstract only and are open access.
Wydawca: ISHR World Congress

A different perspective on illumination choice for label-free scattering microscopy

Autorzy: Y. Qin, Y. Zhong, and K. Agarwal
Opublikowane w: Focus on Microscopy 2026, 2026
Wydawca: Focus on Microscopy

Marked increase in mitochondria degradation in engineered heart tissue during reperfusion

Autorzy: Mireia Nager Grifo
Opublikowane w: Experimental Health Research Conference, 2023
Wydawca: UiT The Arctic University of Norway

Chemogenetics to study the interplay between cardiac contractility and cardiomyocyte morphology

Autorzy: Judith Rössinger
Opublikowane w: Keystone Conference, 2023
Wydawca: Keystone Conference

"“Focus on engineered heart tissue transplantation: The HeartVision project”, invited talk at NORHEART seminar: ""Mechanisms in Cardiac Metabolism and Mitochondrial function: Highlighting Translational Aspects"", UiT, 2026"

Autorzy: A. B. Birgisdottir
Opublikowane w: 2026, Strona(/y) No abstracts were published. The seminar was open to all and streamed. Link to the program provided.
Wydawca: UiT-The Arctic University of Norway

Predicting Early Diabetic Kidney Disease Using a 3D Mesangial Model and Bayesian Mechano-Chemical Stratification

Autorzy: Biswajoy Ghosh, Farhad Niknam, Nikhil Kumar, Kristin Andreassen Fenton, Krishna Agarwal
Opublikowane w: 2026
Wydawca: openRxiv
DOI: 10.1101/2023.12.10.571017

Codeset: Modelling Irregularly Sampled Time Series Without Imputation

Autorzy: Rohit Agarwal
Opublikowane w: 2023
Wydawca: Github

MiShape: 3D Shape Modelling of Mitochondria in Microscopy

Autorzy: Abhinanda R. Punnakkal, Suyog S Jadhav, Alexander Horsch, Krishna Agarwal, Dilip K. Prasad
Opublikowane w: 2023
Wydawca: Arxiv

Replication Data for: Multiple signal classification as a blind reconstruction approach for three-dimensional structured illumination microscopy

Autorzy: Ida S. Opstad
Opublikowane w: 2023
Wydawca: DataverseNO

LysoTracker Deep Red exhibits photoconversion in multi-color structured illumination microscopy

Autorzy: Ida Sundvor Opstad, Kenneth Bowitz Larsen, Åsa Birna Birgisdottir, Krishna Agarwal
Opublikowane w: 2023
Wydawca: BiorXiv
DOI: 10.1101/2023.10.29.564502

Fluorescence microscopy videos of mitochondria in H9c2 cardiomyoblasts

Autorzy: Ida S. Opstad
Opublikowane w: 2023
Wydawca: DataverseNO

Contractility governs cardiomyocyte cell cycle activity

Autorzy: Nancy Shehata, Rajiven Srikantharajah, Eleonore Baier, Christoph Manthey, Tim Stüdemann, Marie Nehring, Anita Covic, Christian Müller, Bente Siebels, Paula Nissen, Anika Witten, Magdalena Zafra Castellano, Yago Rodriguez, Lucia Zamacona Gomez, Imke Janssen, Jorge Rodriguez, Andrea Garza Enriquez, Miguel Angel Garitagoitia Romero, Romina Di Mattia, Andreas Dendorfer, Alessandra Moretti, Christine
Opublikowane w: 2026
Wydawca: openRxiv
DOI: 10.1101/2025.08.19.671096

Dataset and codeset for BMWP: the first Bengali math word problems dataset for operation prediction and solving

Autorzy: Sanchita Mondal
Opublikowane w: Dataset, 2025
Wydawca: Github

Aux-Drop: Handling Haphazard Inputs in Online Learning Using Auxiliary Dropouts

Autorzy: R. Agarwal
Opublikowane w: Codeset, 2023
Wydawca: Github

Online Learning under Haphazard Input Conditions: A Comprehensive Review and Analysis

Autorzy: R. Agarwal
Opublikowane w: Dataset, 2026
Wydawca: Github

Online Learning under Haphazard Input Conditions: A Comprehensive Review and Analysis

Autorzy: Rohit Agarwal; Arijit Das; Alexander Horsch; Krishna Agarwal; Dilip K. Prasad
Opublikowane w: CoRR, Numer 2, 2024
Wydawca: Arxiv
DOI: 10.48550/arxiv.2404.04903

"""OrganVision: An ERC funded interdisciplinary collaboration project” invited talk at IMB conference"

Autorzy: A. B. Birgisdottir
Opublikowane w: 2022, Strona(/y) The entire event was open for all. The program was broadcast on digital stream of university. temporary link to program is given.
Wydawca: IMB conference

Multifocus microscopy with optically sectioned axial superresolution

Autorzy: Ströhl, Florian; Hansen, Daniel Henry; Nager Grifo, Mireia; Birgisdottir, Åsa Birna
Opublikowane w: Numer 1, 2022
Wydawca: Arxiv
DOI: 10.48550/arxiv.2206.01257

Activity Report 2021

Autorzy: Institut de Nanociència i Nanotecnologia
Opublikowane w: instname:, Numer 1, 2021
Wydawca: University of Barcelona

"""Monitoring mitochondria degradation in cardiac cells"" invited talk at the NORHEART seminar ""Targeting mitochondria in cardiovascular disease"""

Autorzy: A. B. Birgisdottir
Opublikowane w: 2021
Wydawca: NORHEART seminar

Tool & Video Protocol: Tool on fluorescence microscopy images of fixed cardiomyoblasts

Autorzy: Abhinanda Punakkal et al.
Opublikowane w: 2023
Wydawca: JOVE

Phase 1 digital staining AI model codesets using Co-Fl-Lf datasets from conventional microscopes

Autorzy: Lorenzo Venieri
Opublikowane w: Dataset, 2024
Wydawca: Github

«Mitophagy is induced in engineered heart tissue after simulated ischemia and reperfusion», invited talk at NORHEART seminar « Pathways and Regulatory Mechanisms in Metabolism and Mitochondrial Function», UiT-The Arctic University of Norway, Tromsø, Norway, May 12-13, 2025

Autorzy: M. Nager
Opublikowane w: 2025, Strona(/y) No abstracts were published. Seminar open to all NORHEART members and was streamed. Link to program provided.
Wydawca: UiT-The Arctic University of Norway

“Monitoring degradation of mitochondria in cardiac cells”, invited talk at Annual meeting of the Scandinavian Physiological Society

Autorzy: A. B. Birgisdottir
Opublikowane w: 2021, Strona(/y) No abstracts or papers were submitted. Program is open access.
Wydawca: Scandinavian Physiological Society

Wasserstein GAN for three-dimensional multi-channel virtual fluorescent staining

Autorzy: Andrea Masella
Opublikowane w: Codeset, 2024
Wydawca: Github

"«Interdisciplinary collaboration synergy» , invited talk at a ""Research leader seminar"", Faculty of Health Sciences, UiT, 2026"

Autorzy: A. B. Birgisdottir
Opublikowane w: 2026, Strona(/y) No abstracts were published from the seminar. Seminar open to all invited research leaders at the Faculty. Link to the program is provided.
Wydawca: UiT-The Arctic University of Norway

Latent Graph Attention for Enhanced Spatial Context

Autorzy: Ayush Singh, Yash Bhambhu, Himanshu Buckchash, Deepak K. Gupta, Dilip K. Prasad
Opublikowane w: Arxiv, 2023
Wydawca: Arxiv
DOI: 10.48550/arxiv.2307.04149

Codeset: Presenting CODS (Cell Organelle Dynamic Simulation)

Autorzy: A. V. Celeste
Opublikowane w: Codeset, 2023
Wydawca: UiT The Arctic University of Norway

Codeset and dataset for: Graph-based hostile content detection in Hindi language. Discover Computing.

Autorzy: Chakraborty, A., Joardar, S., Prasad, D. K., & Sekh, A. A.
Opublikowane w: Dataset, 2025
Wydawca: Github

Fluorescence microscopy videos of mitochondria and endosomes in H9c2 cardiomyoblasts

Autorzy: Ida S. Opstad
Opublikowane w: 2023
Wydawca: DataverseNO

«Monitoring mitochondria turnover and transfer in cardiac cells», invited talk at the Bioscopy conference, UiT, Tromsø, Norway, 2026

Autorzy: A. B. Birgisdottir
Opublikowane w: 2026, Strona(/y) No abstracts were published. Link to the program is provided.
Wydawca: UiT-The Arctic University of Norway

pNNCLR: Stochastic Pseudo Neighborhoods for Contrastive Learning based Unsupervised Representation Learning Problems

Autorzy: Momojit Biswas, Himanshu Buckchash, Dilip K. Prasad
Opublikowane w: 2023
Wydawca: Arxiv
DOI: 10.48550/arxiv.2308.06983

Towards a More Inclusive AI: Progress and Perspectives in Large Language Model Training for the S\'ami Language

Autorzy: Paul, Ronny; Buckchash, Himanshu; Parida, Shantipriya; Prasad, Dilip K.
Opublikowane w: Numer 1, 2024
Wydawca: Arxiv

"""HeartVision-a success story"", invited speaker at the IMB conference 2025, Faculty of Health Sciences UiT, 2025"

Autorzy: A. B. Birgisdottir
Opublikowane w: 2025, Strona(/y) No abstracts were published. Conference open to all employees at IMB, UiT. Link to the program provided.
Wydawca: UiT-The Arctic University of Norway

"""Exploiting cardiomyocytes derived from human induced pluripotent stem cells and engineered heart tissue for studying cellular mechanism in the human heart"", invited talk at the Experimental Health Research Conference (EHRC), Faculty of Health Sciences, UiT, 2025"

Autorzy: A. B. Birgisdottir
Opublikowane w: 2025, Strona(/y) No abstracts were published from the conference. Link to the conference program is provided.
Wydawca: UiT-The Arctic University of Tromsø

Summer School Course Tutorial Codeset “Interpretable DL Playground”

Autorzy: Ayush Somani
Opublikowane w: 2023
Wydawca: Github

"""Marked increase in mitochondria degradation in engineered heart tissue during reperfusion"""

Autorzy: A. B. Birgisdottir and M.N. Grifo
Opublikowane w: 2023
Wydawca: Mimisbrunnr conference

"""Mitophagy is induced in engineered heart tissue after simulated ischemia and reperfusion"", invited talk to present the published paper´s main findings at a webinar organized by MITOtalks and Focal plane, 2025."

Autorzy: M. Nager and A. B. Birgisdottir
Opublikowane w: 2025, Strona(/y) No abstracts published. Webinar open to all that registrered. Link to webinar announcement provided.
Wydawca: MITOtalks and Focal Plane

3DMSL - 3D Mitochondria Shape Library for Optical Microscopy

Autorzy: Punnakkal, Abhinanda Ranjit; Jadhav, Suyog S; Celeste, Aaron Vaughn; Horsch, Alexander; Agarwal, Krishna; Prasad, Dilip K
Opublikowane w: Dataset, 2024
Wydawca: DataverseNO
DOI: 10.18710/jx6jxf

MABNET: Master Assistant Buddy Network With Hybrid Learning for Image Retrieval

Autorzy: R. Agarwal
Opublikowane w: 2023
Wydawca: Github

""" Insights into Cardiac Repair Mechanisms from Engineered Heart Tissue"". Keynote talk at NOR-MPS-the annual NOR-MPS; Nordic Organoid and Microphysiological Systems Convention, University of Oslo, Oslo, Norway, 2026"

Autorzy: Florian Weinberger
Opublikowane w: 2026, Strona(/y) No abstracts were published. Link to the program is attached.
Wydawca: University of Oslo

Label-free acoustic and optical microscopy of live tumor spheroids in hydrogel for high-throughput 3D In-vitro drug screening

Autorzy: Biswajoy Ghosh, Komal Agarwal, Anowarul Habib, Krishna Agarwal, Frank Melandsø
Opublikowane w: 2026
Wydawca: openRxiv
DOI: 10.1101/2024.08.28.610181

Finding an Appropriate Dose for Engineered Heart Tissue

Autorzy: Florian Weinberger
Opublikowane w: Translational Research Seminar Series, SickKids Hospital, Toronto, Canada, Numer No abstract submitted, 2021
Wydawca: SickKids Hospital

"""Exploiting engineered heart tissue to decipher mitochondria quality control in the human heart"", invited talk at NOR-MPS, the annual Nordic Organoid and Microphysiological Systems Convention Oslo, Norway, 2026"

Autorzy: A. B. Birgisdottir
Opublikowane w: 2025, Strona(/y) No abstracts published from the symposium. Link to the program provided.
Wydawca: University of Oslo

Modelling Irregularly Sampled Time Series Without Imputation

Autorzy: Rohit Agarwal, Aman Sinha, Dilip K. Prasad, Marianne Clausel, Alexander Horsch, Mathieu Constant, Xavier Coubez
Opublikowane w: 2023
Wydawca: Arxiv
DOI: 10.48550/arxiv.2309.08698

Paper Code: Virtual Labeling of Mitochondria in Living Cells using Physics-guided Deep Learning

Autorzy: Ayush Somani
Opublikowane w: 2022
Wydawca: Github

Arctic LLM Workshop Hands-on Tutorial Session

Autorzy: Ayush Somani
Opublikowane w: 2023
Wydawca: Github

Dense Video Captioning: A Survey of Techniques, Datasets and Evaluation Protocols

Autorzy: Qasim, Iqra; Horsch, Alexander; Prasad, Dilip K.
Opublikowane w: Numer 1, 2023
Wydawca: Arxiv
DOI: 10.48550/arxiv.2311.02538

Evidence for the inhibition of cardiomyocytes cycle activity by cardiac contraction

Autorzy: Nancy Sorial Samy Shehata
Opublikowane w: 2026
Wydawca: University of Hamburg

Reconstructing 3D Geometries of sub-cellular structures from SMLM clouds

Autorzy: S. Jadhav
Opublikowane w: 2023
Wydawca: UiT The Arctic University of Norway

Multiple Signal Classification Algorithm: A computational microscopy tool for fluorescence microscopy

Autorzy: Sebastián Andrés Acuña Maldonado
Opublikowane w: 2023
Wydawca: MUNIN, UiT

Study of mitochondrial degradation induced by cryoinjury in engineered heart tissue

Autorzy: Synne Amalie Hansen
Opublikowane w: 2024
Wydawca: UiT-The Arctic University of Norway

Scalable Online Deep Learning for Streaming Data with Variable Feature Spaces: Architectures, Imparting Scalability and Data Transformation

Autorzy: Rohit Agarwal
Opublikowane w: 2025
Wydawca: UiT The Arctic University of Norway

Presenting CODS (Cell Organelle Dynamic Simulation)

Autorzy: Aaron Celeste
Opublikowane w: 2023
Wydawca: UiT The Arctic University of Norway

Advanced Microscopy for Real-time Imaging of Biological Samples

Autorzy: Christos Alexandropoulos
Opublikowane w: 2026
Wydawca: Universitat de Barcelona

Generative Adversarial Networks For Three-Dimensional Multi-Channel Virtual Fluorescent Staining

Autorzy: Lorenzo Venieri
Opublikowane w: 2024
Wydawca: Università di Bologna
DOI: 10.5281/zenodo.13382862

Study of mitochondrial transfer in hiPSC derived cardiomyocytes and engineered heart tissue

Autorzy: Kristiana Imsa
Opublikowane w: 2023
Wydawca: UiT The Arctic University of Norway

Encoded illumination for high-speed optical microscopy

Autorzy: Eva Maria Torres-Riera
Opublikowane w: 2023
Wydawca: Universitat Politecnica de Catalunya

Scattering-enhanced intensity based tomography

Autorzy: Yingying Qin, Ankit Butola, Yu Zhong, Krishna Agarwal
Opublikowane w: IEEE Transactions on Computational Imaging, 2026, Strona(/y) 1-9, ISSN 2333-9403
Wydawca: Institute of Electrical and Electronics Engineers (IEEE)
DOI: 10.1109/tci.2026.3707064

IReCAPTCHA: a robust image-reasoning CAPTCHA system

Autorzy: Bidyut Das, Dilip K. Prasad, Arif Ahmed Sekh
Opublikowane w: Cybersecurity, Numer 9, 2026, ISSN 2523-3246
Wydawca: Springer Science and Business Media LLC
DOI: 10.1186/s42400-025-00484-0

Fluorescence microscopy and correlative brightfield videos of mitochondria and vesicles in H9c2 cardiomyoblasts

Autorzy: Ida S. Opstad, Åsa B. Birgisdottir, Krishna Agarwal
Opublikowane w: Scientific Data, Numer vol. 11, 2024, Strona(/y) Article 125, ISSN 2052-4463
Wydawca: Springer Nature
DOI: 10.1038/s41597-024-02970-5

Latent Graph Attention for Spatial Context in Light-Weight Networks: Multi-Domain Applications in Visual Perception Tasks

Autorzy: Ayush Singh, Yash Bhambhu, Himanshu Buckchash, Deepak K. Gupta, Dilip K. Prasad
Opublikowane w: Applied Sciences, Numer 14, 2025, Strona(/y) 10677, ISSN 2076-3417
Wydawca: MDPI AG
DOI: 10.3390/app142210677

Graph-based hostile content detection in Hindi language

Autorzy: Angana Chakraborty, Subhankar Joardar, Dilip K. Prasad, Arif Ahmed Sekh
Opublikowane w: Discover Computing, Numer 28, 2025, ISSN 2948-2992
Wydawca: Springer Science and Business Media LLC
DOI: 10.1007/s10791-025-09790-0

Modulating cardiac physiology in engineered heart tissue with the bidirectional optogenetic tool BiPOLES

Autorzy: Barbora Schwarzová, Tim Stüdemann, Muhammed Sönmez, Judith Rössinger, Bangfen Pan, Thomas Eschenhagen, Justus Stenzig, J Simon Wiegert, Torsten Christ, Florian Weinberger
Opublikowane w: Pflugers Archive, European Journal of Physiology, 2023, ISSN 0031-6768
Wydawca: Springer Verlag
DOI: 10.1007/s00424-023-02869-x

Scan-less microscopy based on acousto-optic encoded illumination

Autorzy: Andrea Marchese , Pietro Ricci , Peter Saggau, Martí Duocastella
Opublikowane w: Nanophotonics, Numer Volume 13, Numer 1, 2024, Strona(/y) 63-73, ISSN 2192-8614
Wydawca: Berlin de Gruyter
DOI: 10.1515/nanoph-2023-0616

An UltraMNIST classification benchmark to train CNNs for very large images

Autorzy: Deepak K. Gupta, Udbhav Bamba, Abhishek Thakur, Akash Gupta, Rohit Agarwal, Suraj Sharan, Ertugul Demir, Krishna Agarwal, Dilip K. Prasad
Opublikowane w: Scientific Data, Numer 11, 2024, ISSN 2052-4463
Wydawca: Springer Science and Business Media LLC
DOI: 10.1038/s41597-024-03587-4

Mitophagy is induced in human engineered heart tissue after simulated ischemia and reperfusion

Autorzy: Mireia Nàger, Kenneth B. Larsen, Zambarlal Bhujabal, Trine B. Kalstad, Judith Rössinger, Truls Myrmel, Florian Weinberger, Asa B. Birgisdottir
Opublikowane w: Journal of Cell Science, Numer 138, 2025, ISSN 0021-9533
Wydawca: The Company of Biologists Ltd.
DOI: 10.1242/jcs.263408

TERMIS 2023 – European Chapter Manchester Central Conference Centre Manchester, UK March 28–31, 2023

Autorzy: Biswajoy Ghosh, Krishna Agarwal
Opublikowane w: Tissue Engineering Part A, 2023, ISSN 1937-3341
Wydawca: Mary Ann Liebert Inc.
DOI: 10.1089/ten.tea.2023.29043.abstracts

Multilingual visual question answering for visually impaired people

Autorzy: Ratnabali Pal, Samarjit Kar, Dilip K. Prasad, Arif Ahmed Sekh
Opublikowane w: Discover Artificial Intelligence, Numer 5, 2025, ISSN 2731-0809
Wydawca: Springer Science and Business Media LLC
DOI: 10.1007/s44163-025-00482-8

Propagating Transparency: A Deep Dive into the Interpretability of Neural Networks

Autorzy: Ayush Somani, Alexander Horsch, Ajit Bopardikar, Dilip K. Prasad
Opublikowane w: Nordic Machine Intelligence, Numer 4, 2024, Strona(/y) 1-18, ISSN 2703-9196
Wydawca: University of Oslo Library
DOI: 10.5617/nmi.10755

Mitochondrial dynamics and quantification of mitochondria‐derived vesicles in cardiomyoblasts using structured illumination microscopy

Autorzy: Ida S. Opstad, Gustav Godtliebsen, Balpreet Singh Ahluwalia, Truls Myrmel, Krishna Agarwal, Åsa Birna Birgisdottir
Opublikowane w: Journal of Biophotonics, Numer 15, 2023, ISSN 1864-063X
Wydawca: Wiley - VCH Verlag GmbH & CO. KGaA
DOI: 10.1002/jbio.202100305

Multifocus microscopy with optical sectioning and high axial resolution

Autorzy: Florian Ströhl, Daniel Henry Hansen, Mireia Nager Grifo, Åsa Birna Birgisdottir
Opublikowane w: Optica, Numer Vol. 9, Numer 11, 2022, Strona(/y) 1210-1218, ISSN 2334-2536
Wydawca: Optica Publishing Group
DOI: 10.1364/optica.468583

BMWP: the first Bengali math word problems dataset for operation prediction and solving

Autorzy: Sanchita Mondal, Debnarayan Khatua, Sourav Mandal, Dilip K. Prasad, Arif Ahmed Sekh
Opublikowane w: Discover Artificial Intelligence, Numer 5, 2025, ISSN 2731-0809
Wydawca: Springer Science and Business Media LLC
DOI: 10.1007/s44163-025-00243-7

Improving visual question answering for visually impaired people leveraging pre-trained models

Autorzy: Ratnabali Pal, Samarjit Kar, Dilip K. Prasad, Arif Ahmed Sekh
Opublikowane w: Discover Applied Sciences, Numer 8, 2026, ISSN 3004-9261
Wydawca: Springer Science and Business Media LLC
DOI: 10.1007/s42452-025-07996-x

The multifaceted role of autophagy and mitophagy in cardiovascular health and disease

Autorzy: Mireia Nàger, Mauro Calvoli, Kenneth B. Larsen, Asa B. Birgisdottir
Opublikowane w: Autophagy Reports, Numer 4, 2025, ISSN 2769-4127
Wydawca: Informa UK Limited
DOI: 10.1080/27694127.2025.2572511

3D Mitochondria Shape Library for Optical Microscopy (3DMSL): A multimodal dataset for deep learning based mitochondrial analysis

Autorzy: Abhinanda R. Punnakkal, Suyog S. Jadhav, Aaron V. Celeste, Alexander Horsch, Krishna Agarwal, Dilip K. Prasad
Opublikowane w: Data in Brief, Numer 65, 2026, Strona(/y) 112507, ISSN 2352-3409
Wydawca: Elsevier BV
DOI: 10.1016/j.dib.2026.112507

Author Correction: Viewing life without labels under optical microscopes

Autorzy: Biswajoy Ghosh, Krishna Agarwal
Opublikowane w: Communications Biology, Numer 7, 2024, ISSN 2399-3642
Wydawca: Springer Science and Business Media LLC
DOI: 10.1038/s42003-024-06977-x

AI-driven analysis by identifying risk factors of VL relapse in HIV co-infected patients

Autorzy: Abhishek Kumar, Sanchita Mondal, Debnarayan Khatua, Debashree Guha, Budhaditya Mukherjee, Arista Lahiri, Dilip K. Prasad, Arif Ahmed Sekh
Opublikowane w: Scientific Reports, Numer 15, 2025, ISSN 2045-2322
Wydawca: Nature Publishing Group
DOI: 10.1038/s41598-025-07406-7

HnRNP K mislocalisation is a novel protein pathology of frontotemporal lobar degeneration and ageing and leads to cryptic splicing

Autorzy: Alexander Bampton, Ariana Gatt, Jack Humphrey, Sara Cappelli, Dipanjan Bhattacharya, Sandrine Foti, Anna-Leigh Brown, Yasmine Asi, Yi Hua Low, Marco Foiani, Towfique Raj, Emanuele Buratti, Pietro Fratta, Tammaryn Lashley
Opublikowane w: Acta Neuropathologica, Numer 142, 2021, Strona(/y) 609-627, ISSN 0001-6322
Wydawca: Springer Verlag
DOI: 10.1007/s00401-021-02340-0

3D refractive index reconstruction from phaseless coherent optical microscopy data using multiple scattering-based inverse solvers - a study

Autorzy: Yingying Qin, Ankit Butola, Krishna Agarwal
Opublikowane w: Inverse Problems, Numer volume 40, no. 1, 2023, Strona(/y) article 015003, ISSN 0266-5611
Wydawca: Institute of Physics Publishing
DOI: 10.1088/1361-6420/ad0c29

Multiphoton Imaging With Frequency Encoded Illumination Using Dual Acousto-Optic Deflectors

Autorzy: M. Skorsetz, A. König, G. Rieger, K. König
Opublikowane w: IEEE Photonics Journal, Numer 18, 2026, Strona(/y) 1-6, ISSN 1943-0655
Wydawca: Institute of Electrical and Electronics Engineers
DOI: 10.1109/jphot.2026.3660905

Abstract 14720: Marked Increase in Mitochondria Degradation in Engineered Heart Tissue During Reperfusion

Autorzy: Mireia Nager, Zambarlal Bhujabal, Kenneth B Bowitz Larsen, Trine B Kalstad, Truls Myrmel, Asa B Birgisdottir
Opublikowane w: Circulation, Numer 146, 2023, ISSN 0009-7322
Wydawca: Lippincott Williams & Wilkins Ltd.
DOI: 10.1161/circ.146.suppl_1.14720

High-speed fluctuation microscopy with acousto-optic illumination

Autorzy: F Niknam, L Rodríguez-Suné, K Agarwal, M Duocastella
Opublikowane w: Journal of Physics: Photonics, Numer 8, 2026, Strona(/y) 025004, ISSN 2515-7647
Wydawca: IOP Publishing
DOI: 10.1088/2515-7647/ae54eb

Modulation of cardiomyocyte contractility and action potentials with chemogenetic chloride currents

Autorzy: Muhammed Sönmez, Tim Stüdemann, Christoph Manthey, Anita Covic, Nancy Shehata, Junsoo Im, Barbora Schwarzova, Judith Rössinger, Rajiven Srikantharajah, Aya Shibamiya, Edzard Schwedhelm, Thomas Eschenhagen, Torsten Christ, Florian Weinberger
Opublikowane w: The Journal of Physiology, Numer 603, 2025, Strona(/y) 1399-1415, ISSN 0022-3751
Wydawca: Blackwell Publishing Inc.
DOI: 10.1113/jp286428

Chemogenetic engineered heart tissue to study the influence of contractility on cardiac maturation

Autorzy: Rajiven Srikantharajah, Tim Stüdemann, Nancy Shehata, Christoph Manthey, Thomas Eschenhagen, Florian Weinberger
Opublikowane w: Journal of Molecular and Cellular Cardiology Plus, Numer 15, 2026, Strona(/y) 100719, ISSN 2772-9761
Wydawca: Elsevier BV
DOI: 10.1016/j.jmccpl.2025.100719

VisionAidQA: Advancing Visual Question Answering for the Visually Impaired

Autorzy: Ratnabali Pal, Samarjit Kar, Dilip K. Prasad, Arif Ahmed Sekh
Opublikowane w: ACM Computing Surveys, Numer 58, 2026, Strona(/y) 1-36, ISSN 0360-0300
Wydawca: Association for Computing Machinary, Inc.
DOI: 10.1145/3788861

Impulse initiation in engrafted pluripotent stem cell-derived cardiomyocytes can stimulate the recipient heart

Autorzy: Tim Stüdemann, Barbora Schwarzova, Till Schneidewind, Birgit Geertz, Constantin von Bibra, Marie Nehring, Judith Rössinger, J. Simon Wiegert, Thomas Eschenhagen, Florian Weinberger
Opublikowane w: Stem Cell Reports, 2026, ISSN 2213-6711
Wydawca: Cell Press
DOI: 10.1101/2023.11.12.566756

Snapshot Quantitative Phase Imaging with Acousto-Optic Chromatic Aberration Control

Autorzy: Christos Alexandropoulos, Laura Rodríguez-Suñé, Martí Duocastella
Opublikowane w: Sensors, Numer 25, 2025, Strona(/y) 4503, ISSN 1424-8220
Wydawca: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/s25144503

Viewing life without labels under optical microscopes

Autorzy: Biswajoy Ghosh, Krishna Agarwal
Opublikowane w: Communication Biology, Numer vol. 6, 2023, Strona(/y) article number 559, ISSN 2399-3642
Wydawca: Springer Nature
DOI: 10.1038/s42003-023-04934-8

BGPCN: A BERT and GPT-2-based Relational Graph Convolutional Network for hostile Hindi information detection

Autorzy: Angana Chakraborty, Subhankar Joardar, Dilip K. Prasad, Arif Ahmed Sekh
Opublikowane w: Array, Numer 28, 2026, Strona(/y) 100601, ISSN 2590-0056
Wydawca: Elsevier BV
DOI: 10.1016/j.array.2025.100601

Challenges and perspectives of heart repair with pluripotent stem cell-derived cardiomyocytes

Autorzy: Thomas Eschenhagen, Florian Weinberger
Opublikowane w: Nature Cardiovascular Research, Numer 3, 2024, Strona(/y) 515-524, ISSN 2731-0590
Wydawca: Springer Science and Business Media LLC
DOI: 10.1038/s44161-024-00472-6

Analyzing Mitochondrial Morphology Through Simulation Supervised Learning

Autorzy: Abhinanda Ranjit Punnakkal, Gustav Godtliebsen, Ayush Somani, Sebastian Andres Acuna Maldonado, Åsa Birna Birgisdottir, Dilip K. Prasad, Alexander Horsch, Krishna Agarwal
Opublikowane w: Journal of Visualized Experiments, 2024, ISSN 1940-087X
Wydawca: MYJoVE Corporation
DOI: 10.3791/64880-v

Molecular histopathology of matrix proteins through autofluorescence super-resolution microscopy

Autorzy: Biswajoy Ghosh, Jyotirmoy Chatterjee, Ranjan Rashmi Paul, Sebastian Acuña, Pooja Lahiri, Mousumi Pal, Pabitra Mitra, Krishna Agarwal
Opublikowane w: Scientific Reports, Numer 14, 2024, ISSN 2045-2322
Wydawca: Nature Publishing Group
DOI: 10.1038/s41598-024-61178-0

Label-free correlative morpho-chemical tomography of 3D kidney mesangial cells

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