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Ecosystem in a box: Dissecting the dynamics of a defined microbial community in vitro

Deliverables

Data Management Plan

Compilation of the Open Research Data Management Plan

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Publications

Null-model-based network comparison reveals core associations

Author(s): Lisa Röttjers, Doris Vandeputte, Jeroen Raes, Karoline Faust
Published in: ISME Communications, Issue 1/1, 2021, ISSN 2730-6151
DOI: 10.1038/s43705-021-00036-w

manta: a Clustering Algorithm for Weighted Ecological Networks

Author(s): Lisa Röttjers, Karoline Faust
Published in: mSystems, Issue 5/1, 2020, ISSN 2379-5077
DOI: 10.1128/msystems.00903-19

Synthetic ecology of the human gut microbiota

Author(s): Gino Vrancken, Ann C. Gregory, Geert R. B. Huys, Karoline Faust, Jeroen Raes
Published in: Nature Reviews Microbiology, Issue 17/12, 2019, Page(s) 754-763, ISSN 1740-1526
DOI: 10.1038/s41579-019-0264-8

Towards a Better Understanding of Microbial Community Dynamics through High-Throughput Cultivation and Data Integration

Author(s): Karoline Faust
Published in: mSystems, Issue 4/3, 2019, ISSN 2379-5077
DOI: 10.1128/msystems.00101-19

Open challenges for microbial network construction and analysis

Author(s): Karoline Faust
Published in: The ISME Journal, 2021, ISSN 1751-7362
DOI: 10.1038/s41396-021-01027-4