CORDIS provides links to public deliverables and publications of HORIZON projects.
Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .
Deliverables
Priority lists of species selected for sampling in WP5 and WP12 based on a gap analysis of available reference genomes for European biodiversity and a feasibility evaluation, serves as guideline for general prioritisation in genome sequencing consortia.
Metadata collection standards (opens in new window)Produce standard metadata collection sheets to be used by participants in the Project.
Biobanking standards (opens in new window)Definition of biobanking standards and guidelines for the Project, with option for central biobank storage.
SOPs karyotyping, genome size, cell culturing (opens in new window)SOPs for karyotyping, genome size estimation and cell culturing and maintenance of frozen archives.
Genome assembly/quality control tools (opens in new window)State-of-the-art genome assembly and quality control tools packaged in openly accessible computational workflows for use by in-Project partners and the wider genomics community.
Aquatic field sampling (opens in new window)Report documenting samples collected for reference library barcoding and eDNA samples collected from marine ports for biomonitoring.
Instance of BOLD Europe (opens in new window)Set-up an operational instance of BOLD in Europe.
Prioritisation guidelines for the wider community (opens in new window)This report will detail plans that guide species selection for the duration of the project and other consortia in the wider biodiversity genomics (BioGenomes) community.
Material for genome sequencing critical European biodiversity (opens in new window)150-200 species submitted to sequencing centres, vouchered in biobanks and museums and metadata completed.
BOLD Europe design study (opens in new window)A consensus report on the future architecture and implementation steps of the BOLD Europe instance.
Material for genome sequencing European biodiversity hotspots (opens in new window)150-200 species (providing ca. 200Gbp genome assembly span, further material for future extension) submitted to sequencing centres, vouchered in biobanks and museums and metadata completed.
Terrestrial field sampling (opens in new window)Report documenting the sampling for barcoding and metabarcoding, proposing methodological guidelines for standardisation of field sampling for biomonitoring of terrestrial habitats using DNA metabarcoding.
Population-level sample collection (opens in new window)Report summarising all population-level ollinator sampling efforts and delivered samples.
Full release of content-rich online platform providing a nexus for the DNA barcoding community in Europe.
Publications
Author(s):
Kessy Abarenkov, R Henrik Nilsson, Karl-Henrik Larsson, Andy F S Taylor, Tom W May, Tobias Guldberg Frøslev, Julia Pawlowska, Björn Lindahl, Kadri Põldmaa, Camille Truong, Duong Vu, Tsuyoshi Hosoya, Tuula Niskanen, Timo Piirmann, Filipp Ivanov, Allan Zirk
Published in:
Nucleic Acids Research, Issue 52, 2023, ISSN 1362-4962
Publisher:
Nucleic Acids Research
DOI:
10.1093/nar/gkad1039
Author(s):
João P. Marques, Paulo C. Alves, Isabel R. Amorim, Ricardo J. Lopes, Monica Moura, Eugene Myers, Manuela Sim-sim, Carla Sousa-Santos, M. Judite Alves, Paulo A. V. Borges, Thomas Brown, Miguel Carneiro, Carlos Carrapato, Luís M. P. Ceríaco, Claúdio Ciofi, Luís P. da Silva, Genevieve Diedericks, Maria Angela Diroma, Liliana Farelo, Giulio Formenti, Fátima Gil, Miguel Grilo, Alessio Iannucci, Henrique G. Leitão, Cristina Máguas, Ann M. Mc Cartney, Sofia L. Mendes, João M. Moreno, Marco Morselli, Alice Mouton, Chiara Natali, Fernando Pereira, Rúben M. C. Rego, Roberto Resendes, Guilherme Roxo, Hannes Svardal, Helena Trindade, Sara Vicente, Sylke Winkler, Marcela Alvarenga, Andreia J. Amaral, Agostinho Antunes, Paula F. Campos, Adelino V. M. Canário, Rita Castilho, L. Filipe C. Castro, Angelica Crottini, Mónica V. Cunha, Gonçalo Espregueira Themudo, Pedro J. Esteves, Rui Faria, Carlos Rodríguez Fernandes, Jean-Baptiste Ledoux, Bruno Louro, Sara Magalhaes, Octávio S. Paulo, Gareth Pearson, João Pimenta, Francisco Pina-Martins, Teresa L. Santos, Ester Serrão, José Melo-Ferreira, Vítor C. Sousa
Published in:
npj Biodiversity, Issue 3, 2024, ISSN 2731-4243
Publisher:
Springer Science and Business Media LLC
DOI:
10.1038/S44185-024-00061-7
Author(s):
Petros Lymberakis, Danae Karakasi, Manolis Papadimitrakis, Rita Monteiro, Astrid Böhne, Rosa Fernández, Nuria Escudero, Jean-Marc Aury, Alice Moussy, Corinne Cruaud, Karine Labadie, Sophie Mangenot, Caroline Belser, Lola Demirdjian, Swati Sinha, Leanne Haggerty, Fergal Martin, Patrick Wincker, Pedro H. Oliveira, Tom Brown
Published in:
2025
Publisher:
Pensoft Publishers
DOI:
10.3897/ARPHAPREPRINTS.E153920
Author(s):
Elena Buzan, Aja Bončina, Boštjan Pokorny, Nuria Escudero, Rosa Fernández, Astrid Böhne, Rita Monteiro, Marta Gut, Francisco Câmara Ferreira, Fernando Cruz, Jèssica Gómez-Garrido, Tyler S. Alioto, Leanne Haggerty, Fergal Martin, Diego De Panis
Published in:
2024
Publisher:
Cold Spring Harbor Laboratory
DOI:
10.1101/2024.11.20.624344
Author(s):
Zamoroka, A., & Zinenko, O.
Published in:
Journal of Vasyl Stefanyk Precarpathian National University. Biology,, Issue 11, 2024, ISSN 2413-2349
Publisher:
Vasyl Stefanyk Precarpathian National University
DOI:
10.15330/JPNUBIO.11.6-19
Author(s):
Sarah C Dyer, Olanrewaju Austine-Orimoloye, Andrey G Azov, Matthieu Barba, If Barnes, Vianey Paola Barrera-Enriquez, Arne Becker, Ruth Bennett, Martin Beracochea, Andrew Berry, Jyothish Bhai, Simarpreet Kaur Bhurji, Sanjay Boddu, Paulo R Branco Lins, Lucy Brooks, Shashank Budhanuru Ramaraju, Lahcen I Campbell, Manuel Carbajo Martinez, Mehrnaz Charkhchi, Lucas A Cortes, Claire Davidson, Sukanya Denni, Kamalkumar Dodiya, Sarah Donaldson, Bilal El Houdaigui, Tamara El Naboulsi, Oluwadamilare Falola, Reham Fatima, Thiago Genez, Jose Gonzalez Martinez, Tatiana Gurbich, Matthew Hardy, Zoe Hollis, Toby Hunt, Mike Kay, Vinay Kaykala, Diana Lemos, Disha Lodha, Nourhen Mathlouthi, Gabriela Alejandra Merino, Ryan Merritt, Louisse Paola Mirabueno, Aleena Mushtaq, Syed Nakib Hossain, José G Pérez-Silva, Malcolm Perry, Ivana Piližota, Daniel Poppleton, Irina Prosovetskaia, Shriya Raj, Ahamed Imran Abdul Salam, Shradha Saraf, Nuno Saraiva-Agostinho, Swati Sinha, Botond Sipos, Vasily Sitnik, Emily Steed, Marie-Marthe Suner, Likhitha Surapaneni, Kyösti Sutinen, Francesca Floriana Tricomi, Ian Tsang, David Urbina-Gómez, Andres Veidenberg, Thomas A Walsh, Natalie L Willhoft, Jamie Allen, Jorge Alvarez-Jarreta, Marc Chakiachvili, Jitender Cheema, Jorge Batista da Rocha, Nishadi H De Silva, Stefano Giorgetti, Leanne Haggerty, Garth R Ilsley, Jon Keatley, Jane E Loveland, Benjamin Moore, Jonathan M Mudge, Guy Naamati, John Tate, Stephen J Trevanion, Andrea Winterbottom, Bethany Flint, Adam Frankish, Sarah E Hunt, Robert D Finn, Mallory A Freeberg, Peter W Harrison, Fergal J Martin, Andrew D Yates
Published in:
Nucleic Acids Research, Issue 53, 2025, ISSN 0305-1048
Publisher:
Oxford University Press (OUP)
DOI:
10.1093/NAR/GKAE1071
Author(s):
Corrales, C., Bacela-Spychalska, K., Buzan, E., Ekrem, T., Ferreira, S., Goodall-Copestake, W., van Ommen Kloeke, E., Hollingsworth, P., Bourlat, S. J.
Published in:
Molecular Ecology (in review), 2025
Publisher:
NA
DOI:
10.22541/au.174238571.18077669/v1
Author(s):
Astrid Böhne, Rosa Fernández, Jennifer A. Leonard, Ann M. McCartney, Seanna McTaggart, José Melo-Ferreira, Rita Monteiro, Rebekah A. Oomen, Olga Vinnere Pettersson, Torsten H. Struck
Published in:
Contextualising samples: Supporting reference genomes of European biodiversity through sample and associated metadata collection, 2024, ISSN 2692-8205
Publisher:
npj Biodiversity
DOI:
10.1038/S44185-024-00053-7
Author(s):
Marc Ventura, Nati Franch, Rosa Fernández, Javier Palma-Guerrero, Astrid Böhne, Rita Monteiro, Laura Aguilera, Marta Gut, Tyler S Alioto, Francisco Câmara Ferreira, Fernando Cruz, Jèssica Gómez-Garrido, Leanne Haggerty, Fergal Martin, Tom Brown
Published in:
2025
Publisher:
Pensoft Publishers
DOI:
10.3897/ARPHAPREPRINTS.E152862
Author(s):
Katerina Vasileiadou, Tereza Manousaki, Thanos Dailianis, Grigorios Skouradakis, Emmanouela Vernadou, Danae Karakasi, Astrid Böhne, Rita Monteiro, Rosa Fernández, Nuria Escudero, Genoscope Sequencing Team, Alice Moussy, Corinne Cruaud, Karine Labadie, Lola Demirdjian, Emilie Téodori, Simone Duprat, Patrick Wincker, Pedro H Oliveira, Jean-Marc Aury, Leanne Haggerty, Swati Sinha, Fergal Martin, Chiara Bortoluzzi
Published in:
2025
Publisher:
Pensoft Publishers
DOI:
10.3897/ARPHAPREPRINTS.E154439
Author(s):
Franc Janžekovič, Elena Buzan, Aja Bončina, Nuria Escudero, Rosa Fernández, Astrid Böhne, Rita Monteiro, Laura Aguilera, Marta Gut, Francisco Câmara Ferreira, Fernando Cruz, Jèssica Gómez-Garrido, Tyler Alioto, Leanne Haggerty, Fergal Martin, Diego De Pan
Published in:
2025
Publisher:
ARPHA Preprints
DOI:
10.3897/ARPHAPREPRINTS.E154773
Author(s):
Peter W Harrison et. al.
Published in:
Nucleic Acids Research, 2023, ISSN 1362-4962
Publisher:
Oxford University Press
DOI:
10.1093/NAR/GKAD1049
Author(s):
Tatjana Čelik, Tjaša Lokovšek, Elena Bužan, Astrid Böhne, Rita Monteiro, Rosa Fernández, Nuria Escudero, Marta Gut, Laura Aguilera, Francisco Câmara Ferreira, Fernando Cruz, Jèssica Gómez-Garrido, Tyler S. Alioto, Chiara Bortoluzzi
Published in:
2025
Publisher:
Cold Spring Harbor Laboratory
DOI:
10.1101/2025.02.10.637396
Author(s):
Marta Vila, Laura Torrado-Blanco, Nils Ryrholm, David Romero-Pedreira, María Conejero, Astrid Böhne, Rita Monteiro, Thomas Marcussen, Rebekah Oomen, Torsten Hugo Struck, Laura Aguilera, Marta Gut, Francisco Câmara Ferreira, Fernando Cruz Rodriguez, Jèssica Gómez-Garrido, Tyler S. Alioto, Chiara Bortoluzzi
Published in:
2025
Publisher:
Cold Spring Harbor Laboratory
DOI:
10.1101/2025.01.08.631636
Author(s):
Ali Hakimzadeh, Alejandro Abdala Asbun, Davide Albanese, Maria Bernard, Dominik Buchner, Benjamin Callahan, J. Gregory Caporaso, Emily Curd, Christophe Djemiel, Mikael Brandström Durling, Vasco Elbrecht, Zachary Gold, Hyun S. Gweon, Mehrdad Hajibabaei, Falk Hildebrand, Vladimir Mikryukov, Eric Normandeau, Ezgi Özkurt, Jonathan M. Palmer, Géraldine Pascal, Teresita M. Porter, Daniel Straub, Martti Vasar, Tomáš Větrovský, Haris Zafeiropoulos, Sten Anslan
Published in:
Molecular Ecology Resources, Issue 24, 2024, ISSN 1755-098X
Publisher:
Wiley
DOI:
10.1111/1755-0998.13847
Author(s):
Vladimir Pešić, Ekaterina S. Konopleva, Alessio Iannucci, Sónia Ferreira, Elisabeth Stur
Published in:
Systematic and Applied Acarology, 2025, ISSN 2056-6069
Publisher:
Systematic and Applied Acarology Society
DOI:
10.11158/SAA.30.2.14
Author(s):
Lajos Szatmári, Gábor Sramkó, Virág Nyíri, Tamás Cserkész
Published in:
Oryx, Issue 58, 2024, ISSN 0030-6053
Publisher:
Cambridge University Press (CUP)
DOI:
10.1017/S003060532400070X
Author(s):
Wood T, Gaspar H, Divelec RL, Penado A, Silva TL, Mata V, Veríssimo J, Michez D, Castro S, Loureiro J, Beja P, Ferreira S
Published in:
Biodiversity Data Journal, 2024, ISSN 1314-2828
Publisher:
10.3897/BDJ.12.e117172
DOI:
10.3897/BDJ.12.E117172
Author(s):
Brent C. Emerson
Published in:
Molecular Ecology, Issue 34, 2025, ISSN 0962-1083
Publisher:
Wiley
DOI:
10.1111/MEC.17677
Author(s):
Vladimir Pešić, Andrzej Zawal, Sónia Ferreira, Laura Benitez-Bosco, Ana Cruz-Oliveira, Dinis Girão, Adriana Padilha, Paolo Turaccio, Samantha Rossini, Lorenzo Ballini, Giorgia Staffoni, Sara Fratini, Claudio Ciofi, Alessio Iannucci, Torbjørn Ekrem, Elisabeth Stur
Published in:
ZooKeys, Issue 1217, 2024, ISSN 1313-2970
Publisher:
Pensoft Publishers
DOI:
10.3897/ZOOKEYS.1217.131730
Author(s):
Vladimir Pešić, Harry Smit, Dinis Girão, Alessio Iannucci, Elisabeth Stur, Sónia Ferreira
Published in:
Ecologica Montenegrina, Issue 80, 2024, ISSN 2336-9744
Publisher:
Institute for Biodiversity and Ecology
DOI:
10.37828/EM.2024.80.19
Author(s):
Marta Vila, Neus Marí-Mena, Roger Vila, Ana Riesgo, Daniel García-Souto, Carlos Lopez-Vaamonde, Astrid Böhne, Rita Monteiro, Thomas Marcussen, Rebekah Oomen, Torsten Hugo Struck, Marta Gut, Laura Aguilera, Francisco Câmara Ferreira, Fernando Cruz Rodriguez, Jèssica Gómez-Garrido, Tyler S. Alioto, Chiara Bortoluzzi
Published in:
2025
Publisher:
Cold Spring Harbor Laboratory
DOI:
10.1101/2025.01.08.631683
Author(s):
Andersson, L., Bekkevold, D., Berg, F., Farrell, E.D., Felkel, S., Ferreira, M., Fuentes-Pardo, A.P., Goodall, J., Pettersson, M.
Published in:
Annual Review in Animal Biosciences, 2024, ISSN 2165-8102
Publisher:
Annual Reviews Inc.
DOI:
10.1146/ANNUREV-ANIMAL-021122-102933
Author(s):
Jaume Pellicer, Teresa Garnatje, Daniel Vitales, Oriane Hidalgo, Joan Valles, Alfredo Garcia-Fernandez, Arnoldo Santos-Guerra, Astrid Bohne, Rita Monteiro, Rosa Fernandez, Nuria Escudero, null null, null null, null null, Abitha Thomas, Benjamin Jackson, Jonathan MD Wood, Kerstin Howe, Mark Blaxter, Shane McCarthy, Chiara Bortoluzzi
Published in:
2025
Publisher:
Cold Spring Harbor Laboratory
DOI:
10.1101/2025.01.24.634661
Author(s):
Paolo Rosa, Thomas Wood, Teresa Luísa L. Silva, Joana Veríssimo, Vanessa A. Mata, Denis Michez, Pedro Beja, Sónia Ferreira
Published in:
The InBIO Barcoding Initiative Database: contribution to the knowledge on DNA barcodes of cuckoo wasps, with the description of new species from the Iberian Peninsula (Hymenoptera, Chrysididae), 2023, ISSN 1314-2828
Publisher:
Biodiversity Data Journal
DOI:
10.3897/BDJ.8.e55137FreePMCarticle
Author(s):
Katerina Vasileiadou, Tereza Manousaki, Thanos Dailianis, Grigorios Skouradakis, Emmanouela Vernadou, Danae Karakasi, Astrid Böhne, Rita Monteiro, Rosa Fernández, Nuria Escudero, Genoscope Sequencing Team, Alice Moussy, Corinne Cruaud, Karine Labadie, Lola Demirdjian, Benjamin Istace, Arnaud Couloux, Patrick Wincker, Pedro H Oliveira, Jean-Marc Aury, Leanne Haggerty, Swati Sinha, Fergal Martin, Chiara Bortoluzzi
Published in:
2025
Publisher:
Pensoft Publishers
DOI:
10.3897/ARPHAPREPRINTS.E154462
Author(s):
Marc Ventura, Nati Franch, Rosa Fernández, Javier Palma-Guerrero, Astrid Böhne, Rita Monteiro, Laura Aguilera, Marta Gut, Tyler S. Alioto, Francisco Câmara Ferreira, Fernando Cruz, Jèssica Gómez-Garrido, Leanne Haggerty, Fergal Martin, Thomas Brown
Published in:
2024
Publisher:
Cold Spring Harbor Laboratory
DOI:
10.1101/2024.07.31.604920
Author(s):
Elena Buzan, Christian de Guttry, Chiara Bortoluzzi, Nathaniel Street, Kay Lucek, Anna Rosling, Lino Ometto, Alice Mouton, Luísa Marins, María José Ruiz-López, José Melo-Ferreira, Elisabet Ottosson, Camila Mazzoni, Robert Waterhouse
Published in:
2024
Publisher:
Authorea, Inc.
DOI:
10.22541/au.172510123.38206942/v1
Author(s):
Fernando Ángel Fernández-Álvarez, Ainhoa Bernal-Bajo, Nuria Escudero, María Conejero, Ana Riesgo, Rosa Fernández, Rita Monteiro, Astrid Böhne, Laura Aguilera, Marta Gut, Tyler S. Alioto, Francisco Câmara Ferreira, Fernando Cruz, Jèssica Gómez-Garrido, Tom Brown
Published in:
2025
Publisher:
Cold Spring Harbor Laboratory
DOI:
10.1101/2025.01.13.632676
Author(s):
Sébastien Lavergne, Alexy Rosa, Chuan Peng, Rita Monteiro, Astrid Böhne, Thomas Marcussen, Torsten Struck, Rebekah A. Oomen, null null, Alice Moussy, Corinne Cruaud, Karine Labadie, Emilie Téodori, Lola Demirdjian, Patrick Wincker, Pedro H. Oliveira, Jean-Marc Aury, Tom Brown
Published in:
2025
Publisher:
Cold Spring Harbor Laboratory
DOI:
10.1101/2025.01.21.634019
Author(s):
Heriberto López, Pedro Oromí, Xavier Belles, Guillem Ylla, Nuria Escudero, Rosa Fernández, Astrid Böhne, Marta Gut, Laura Aguilera, Tyler Alioto, Francisco Câmara Ferreira, Jèssica Gómez-Garrido, Fernando Cruz, Rita Monteiro
Published in:
2025, ISSN 2692-8205
Publisher:
Cold Spring Harbor Laboratory
DOI:
10.1101/2025.02.06.636782
Author(s):
Tom Brown, Kathleen A. Collier, Fernando Cruz, Anestis Gkanogiannis, Sagane Joye-Dind, Yannis Nevers, Stepan Saenko, Tyler Alioto, Anthony Bretaudeau, Michael Charleston, Phuong Duy Doan, Christoph Hahn, Thomas W. Harrop, Katie E Herron, Fredrick Kebaso,
Published in:
BioHackrXiv Preprints, 2024
Publisher:
BioHackrXiv.org
DOI:
10.37044/OSF.IO/FY49G
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