Non-invasive computational immunohistochemical staining based on deep learning and multimodal imaging

Project Information

STAIN-IT

Grant agreement ID: 101088997

DOI

10.3030/101088997

EC signature date 17 March 2023

Start date 1 September 2023

End date 31 August 2028

Funded under

• European Research Council (ERC)

Total cost

€ 1 989 086,00

EU contribution

€ 1 989 086,00

Coordinated by

LEIBNIZ-INSTITUT FUER PHOTONISCHE TECHNOLOGIEN E.V.
Germany

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Publications

Peer reviewed articles (10)

Exploring feature extraction methods for Raman spectroscopy: A comparative study

Author(s): Jamile Mohammad Jafari, Thomas Bocklitz
Published in: Analytica Chimica Acta, Issue 1380, 2025, ISSN 0003-2670
Publisher: Elsevier BV
DOI: 10.1016/J.ACA.2025.344755

Explainable artificial intelligence for spectroscopy data: a review

Author(s): Contreras, Jhonatan; Bocklitz, Thomas
Published in: Pflügers Archiv - European Journal of Physiology, 2024, ISSN 1432-2013
Publisher: Springer-Verlag
DOI: 10.1007/S00424-024-02997-Y

A comparative study of statistical, radiomics, and deep learning feature extraction techniques for medical image classification in optical and radiological modalities

Author(s): Pegah Dehbozorgi, Oleg Ryabchykov, Thomas W. Bocklitz
Published in: Computers in Biology and Medicine, Issue 187, 2025, ISSN 0010-4825
Publisher: Elsevier BV
DOI: 10.1016/J.COMPBIOMED.2025.109768

Transfer-Learning Deep Raman Models Using Semiempirical Quantum Chemistry

Author(s): Jawad Kamran; Julian Hniopek; Thomas Bocklitz
Published in: Journal of Chemical Information and Modeling, 2025, ISSN 1549-960X
Publisher: ACS Publications
DOI: 10.1021/ACS.JCIM.5C00513

A Systematic Investigation of Image Pre-Processing on Image Classification

Author(s): Pegah Dehbozorgi; Oleg Ryabchykov; Thomas Bocklitz
Published in: Computers in Biology and Medicine, Issue 187, 2024, ISSN 1879-0534
Publisher: Elsevier
DOI: 10.1109/ACCESS.2024.3395063

Advances in physics-informed deep learning for imaging data: a review of methods and applications

Author(s): Yogita Yogita, Thomas Bocklitz
Published in: Journal of Physics: Photonics, Issue 7, 2025, ISSN 2515-7647
Publisher: IOP Publishing
DOI: 10.1088/2515-7647/AE10F1

μDeepIQA: deep learning-based fast and robust image quality assessment with local predictions for optical microscopy

Author(s): Elena Corbetta, Thomas Bocklitz
Published in: ArXiv: Computer Vision and Pattern Recognition, 2025, ISSN 2331-8422
Publisher: Cornell University
DOI: 10.48550/ARXIV.2510.04859

Machine Learning‐Based Estimation of Experimental Artifacts and Image Quality in Fluorescence Microscopy

Author(s): Elena Corbetta, Thomas Bocklitz
Published in: Advanced Intelligent Systems, Issue 7, 2025, ISSN 2640-4567
Publisher: Wiley
DOI: 10.1002/AISY.202400491

A Review of Medical Image Registration for Different Modalities

Author(s): Fatemehzahra Darzi; Thomas Bocklitz
Published in: Bioengineering (Basel), 2024, ISSN 2306-5354
Publisher: MDPI
DOI: 10.3390/BIOENGINEERING11080786

Multi-marker Similarity Enables Reduced-Reference and Interpretable Image Quality Assessment in Optical Microscopy

Author(s): Elena Corbetta; Thomas Bocklitz
Published in: Research, 2025, ISSN 2639-5274
Publisher: American Association for the Advancement of Science
DOI: 10.48550/ARXIV.2504.01537