Developing an efficient e-infrastructure, standards and data-flow for metabolomics and its interface to biomedical and life science e-infrastructures in Europe and world-wide

Informazioni relative al progetto

COSMOS

ID dell’accordo di sovvenzione: 312941

Progetto chiuso

Data di avvio 1 Ottobre 2012

Data di completamento 30 Settembre 2015

Finanziato da

• Specific Programme "Capacities": Research infrastructures

Costo totale € 2 624 011,00

Contributo UE € 1 960 000,00

Coordinato da

EUROPEAN MOLECULAR BIOLOGY LABORATORY
Germany

Descrizione del progetto

Coordination actions, conferences and studies supporting policy development, including international cooperation, for e-Infrastructures

Metabolomics is an important phenotyping technique for molecular biology and medicine. It assesses the molecular state of an organism or collections of organisms through the comprehensive quantitative and qualitative analysis of all small molecules in cells, tissues, and body fluids. Metabolic processes are at the core of physiology. Consequently, metabolomics is ideally suited as a medical tool to characterise disease states in organisms, as a tool to assessment of organism for their suitability in, for example, renewable energy production or for biotechnological applications in general.We now see the emergence of metabolomics databases and repositories in various subareas of metabolomics and the emergence of large general e-infrastructures in the life sciences. In particular the BioMedBridges project is set to link a variety of European Strategy Forum on Research Infrastructures (ESFRI)'s projects, such as ELIXIR and BBMRI.Metabolomics generates large and diverse sets of analytical data and therefore impose significant challenges for the above mentioned e-infrastructures.We will therefore develop policies to ensure that Metabolomics data is
1.\tEncoded in open standards to allow barrier-free and wide-spread analysis.2.\tTagged with a community-agreed, complete set of metadata (minimum information standard).3.\tSupported by a communally developed set of open source data management and capturing tools.4.\tDisseminated in open-access databases adhering to the above standards.5.\tSupported by vendors and publishers, who require deposition upon publication6.\tProperly interfaced with data in other biomedical and life-science e-infrastructures (such as ELIXIR, BioMedBridges, EU-Openscreen).
In order to achieve this, we have assembled the COSMOS (CCOordination of Standards in MetabOlomicS) consortium of leading European groups in Metabolomics and we will interface with all interested players in Metabolomics world-wide in the Metabolomics community and beyond.

Campo scientifico

• engineering and technology › environmental engineering › energy and fuels › renewable energy
• natural sciences › computer and information sciences › databases
• medical and health sciences › basic medicine › physiology
• natural sciences › biological sciences › molecular biology

Programma(i)

• FP7-INFRASTRUCTURES - Specific Programme "Capacities": Research infrastructures

Argomento(i)

• INFRA-2012-3.3. - Coordination actions, conferences and studies supporting policy development, including international cooperation, for e-Infrastructures

Invito a presentare proposte

FP7-INFRASTRUCTURES-2012-1-INFSO
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Meccanismo di finanziamento

CSA - Coordination and support action

Coordinatore

EUROPEAN MOLECULAR BIOLOGY LABORATORY

• Contributo UE: € 562 794,00
• Indirizzo: Meyerhofstrasse 1 ; 69117 Heidelberg ; Germania
• Regione: Baden-Württemberg › Karlsruhe › Heidelberg, Stadtkreis
• Tipo di attività: Research Organisations
• Contatto amministrativo: Jillian Rowe (Ms.)
• Costo totale: Nessun dato

Partecipanti (15)

LEIBNIZ-INSTITUT FUR PFLANZENBIOCHEMIE

Germania

• Contributo UE: € 154 829,00
• Indirizzo: Weinberg 3 ; 06120 Halle
• Regione: Sachsen-Anhalt › Sachsen-Anhalt › Halle (Saale), Kreisfreie Stadt
• Tipo di attività: Research Organisations
• Contatto amministrativo: Christiane Cyron (Ms.)
• Costo totale: Nessun dato

MAX-PLANCK-GESELLSCHAFT ZUR FORDERUNG DER WISSENSCHAFTEN EV

Germania

• Contributo UE: € 139 100,00
• Indirizzo: HOFGARTENSTRASSE 8 ; 80539 Munchen
• Regione: Bayern › Oberbayern › München, Kreisfreie Stadt
• Tipo di attività: Research Organisations
• Contatto amministrativo: Beatrice Riedel (Ms.)
• Costo totale: Nessun dato

NOVO NORDISK INVEST 4 A/S

Danimarca

• Contributo UE: € 50 321,00
• Indirizzo: NOVO ALLE 1 ; 2880 BAGSVAERD
• Regione: Danmark › Hovedstaden › Københavns omegn
• Tipo di attività: Private for-profit entities (excluding Higher or Secondary Education Establishments)
• Contatto amministrativo: Michelle Ellefson (Ms.)
• Costo totale: Nessun dato

UNIVERSITAT DE BARCELONA

Spagna

• Contributo UE: € 124 334,00
• Indirizzo: GRAN VIA DE LES CORTS CATALANES 585 ; 08007 Barcelona
• Regione: Este › Cataluña › Barcelona
• Tipo di attività: Higher or Secondary Education Establishments
• Contatto amministrativo: Gutierrez Xavier (Mr.)
• Costo totale: Nessun dato

TEKNOLOGIAN TUTKIMUSKESKUS VTT

Partecipazione conclusa

Finlandia

• Contributo UE: € 39 987,00
• Indirizzo: TEKNIIKANTIE 4 A ; 02044 VTT ESPOO
• Tipo di attività: Research Organisations
• Contatto amministrativo: Seija Flinck (Ms.)
• Costo totale: Nessun dato

UNIVERSITE VICTOR SEGALEN BORDEAUX II

Partecipazione conclusa

Francia

• Contributo UE: € 74 900,00
• Indirizzo: RUE LEO SAIGNAT 146 ; 33076 BORDEAUX CEDEX
• Tipo di attività: Higher or Secondary Education Establishments
• Contatto amministrativo: Macha Nikolski (Dr.)
• Costo totale: Nessun dato

CONSORZIO INTERUNIVERSITARIO RISONANZE MAGNETICHE DI METALLO PROTEINE

Italia

• Contributo UE: € 101 008,00
• Indirizzo: PIAZZA DI SAN MARCO 4 ; 50121 FIRENZE
• Regione: Centro (IT) › Toscana › Firenze
• Tipo di attività: Higher or Secondary Education Establishments
• Contatto amministrativo: IVANO BERTINI (Prof.)
• Costo totale: Nessun dato

UNIVERSITEIT LEIDEN

Paesi Bassi

• Contributo UE: € 215 177,00
• Indirizzo: RAPENBURG 70 ; 2311 EZ Leiden
• Regione: West-Nederland › Zuid-Holland › Agglomeratie Leiden en Bollenstreek
• Tipo di attività: Higher or Secondary Education Establishments
• Contatto amministrativo: Ton Brouwer (Mr.)
• Costo totale: Nessun dato

NEDERLANDSE ORGANISATIE VOOR TOEGEPAST NATUURWETENSCHAPPELIJK ONDERZOEK TNO

Paesi Bassi

• Contributo UE: € 19 474,00
• Indirizzo: ANNA VAN BUERENPLEIN 1 ; 2595 DA Den Haag
• Regione: West-Nederland › Zuid-Holland › Agglomeratie ’s-Gravenhage
• Tipo di attività: Research Organisations
• Contatto amministrativo: Marjan van Erk (Dr.)
• Costo totale: Nessun dato

MEDICAL RESEARCH COUNCIL

Regno Unito

• Contributo UE: € 76 184,00
• Indirizzo: 20 Park Crescent ; W1B 1AL LONDON
• Tipo di attività: Public bodies (excluding Research Organisations and Secondary or Higher Education Establishments)
• Contatto amministrativo: John Crisp (Mr.)
• Costo totale: Nessun dato

THE UNIVERSITY OF MANCHESTER

Regno Unito

• Contributo UE: € 97 370,00
• Indirizzo: OXFORD ROAD ; M13 9PL Manchester
• Regione: North West (England) › Greater Manchester › Manchester
• Tipo di attività: Higher or Secondary Education Establishments
• Contatto amministrativo: Liz Fay (Ms.)
• Costo totale: Nessun dato

IMPERIAL COLLEGE OF SCIENCE TECHNOLOGY AND MEDICINE

Regno Unito

• Contributo UE: € 71 048,00
• Indirizzo: SOUTH KENSINGTON CAMPUS EXHIBITION ROAD ; SW7 2AZ LONDON
• Regione: London › Inner London — West › Westminster
• Tipo di attività: Higher or Secondary Education Establishments
• Contatto amministrativo: Tatjana Palalic (Ms.)
• Costo totale: Nessun dato

THE CHANCELLOR, MASTERS AND SCHOLARS OF THE UNIVERSITY OF OXFORD

Regno Unito

• Contributo UE: € 103 148,00
• Indirizzo: WELLINGTON SQUARE UNIVERSITY OFFICES ; OX1 2JD Oxford
• Regione: South East (England) › Berkshire, Buckinghamshire and Oxfordshire › Oxfordshire
• Tipo di attività: Higher or Secondary Education Establishments
• Contatto amministrativo: Linda Pialek (Ms.)
• Costo totale: Nessun dato

THE UNIVERSITY OF BIRMINGHAM

Regno Unito

• Contributo UE: € 108 926,00
• Indirizzo: Edgbaston ; B15 2TT Birmingham
• Regione: West Midlands (England) › West Midlands › Birmingham
• Tipo di attività: Higher or Secondary Education Establishments
• Contatto amministrativo: May Chung (Ms.)
• Costo totale: Nessun dato

UNIVERSITA DEGLI STUDI DI FIRENZE

Italia

• Contributo UE: € 21 400,00
• Indirizzo: Piazza San Marco 4 ; 50121 Florence
• Regione: Centro (IT) › Toscana › Firenze
• Tipo di attività: Higher or Secondary Education Establishments
• Contatto amministrativo: Lucia Banci (Prof.)
• Costo totale: Nessun dato