SemAntically integrating Genomics with Electronic health records for Cancer CARE

Información del proyecto

SAGE-CARE

Identificador del acuerdo de subvención: 644186

DOI 10.3030/644186

Proyecto cerrado

Fecha de la firma de la CE 20 Noviembre 2014

Fecha de inicio 1 Diciembre 2014

Fecha de finalización 30 Noviembre 2018

Financiado con arreglo a

• EXCELLENT SCIENCE - Marie Skłodowska-Curie Actions

Coste total € 450 000,00

Aportación de la UE € 450 000,00

Coordinado por

HOCHSCHULE DARMSTADT (UNIVERSITY OF APPLIED SCIENCES H-DA)
Germany

Resultado final

Websites, patent fillings, videos etc. (5)

Papers and technical reports

Peer reviewed publications will be submitted as well as white papers etc. to be posted on the project website

Academic papers and technical reports

Peer reviewed academic papers will be submitted and white papers published to the project website

Technical Reports

Technical reports will be publisedh to the project webiste and that of the individual consortium members. Additionally peer reviewed publications may be submitted.

Academic review papers

Peer reviewed papers will be submitted for publication

Peer-reviewed papers & technical reports

Peer reviewed academic papers will be submitted for publication and non-confidential technical reports published on the project website

Demonstrators, pilots, prototypes (1)

Web and mobile user applications

Pilot system rolled out using web and mobile interfaces

Publicaciones

Conference proceedings (11)

Flexible yet Efficient Management of Electronic Health Records

Autores: Bernhard G. Humm, Paul Walsh
Publicado en: 2015 International Conference on Computational Science and Computational Intelligence (CSCI), 2015, Página(s) 771-775, ISBN 978-1-4673-9795-7
Editor: IEEE
DOI: 10.1109/CSCI.2015.84

Semantic AutoSuggest for Electronic Health Records

Autores: Ulrich Beez, Bernhard G. Humm, Paul Walsh
Publicado en: 2015 International Conference on Computational Science and Computational Intelligence (CSCI), 2015, Página(s) 760-765, ISBN 978-1-4673-9795-7
Editor: IEEE
DOI: 10.1109/CSCI.2015.85

Rapidly Visualizing NGS Cancer Data Sets with Cloud Computing

Autores: Paul Walsh, Brendan Lawlor, Brian Kelly, Timmy Manning, Timm Heuss and Markus Leopold
Publicado en: AVI 2016 INTERNATIONAL WORKING CONFERENCE ON ADVANCED VISUAL INTERFACES, 2016
Editor: FTK

The Weekend Warrior: How to build a genomic supercomputer in your spare time using Streams and Actors in Scala

Autores: Brendan Lawlor and Paul Walsh
Publicado en: ScalCom 2016 : The 16th IEEE International Conference on Scalable Computing and Communications, 2016
Editor: IEEE

A Dynamic Product Line for an Electronic Health Record Management System for Cancer Care

Autores: Matthias Coym, Bernhard G. Humm, Patrick Spitzer, Paul Walsh
Publicado en: Udo Bleimann, Bernhard Humm, Robert Loew, Stefanie Regier, Ingo Stengel, Paul Walsh (Eds): Proceedings of the Collaborative European Research Conference (CERC 2017), 2017, Página(s) 134-141, ISSN 2220-4164
Editor: CERC 2019

Evidence-Based Medical Recommendations for Personalized Medicine

Autores: Bernhard G. Humm, Fabian Lamba, Tino Landmann, Marc Steffens, Paul Walsh
Publicado en: Udo Bleimann, Bernhard Humm, Robert Loew, Stefanie Regier, Ingo Stengel, Paul Walsh (Eds): Proceedings of the Collaborative European Research Conference (CERC 2017), 2017, Página(s) 147-155, ISSN 2220-4164
Editor: CERC 2017

A Clinical Decision Support System for Personalized Medicine

Autores: Johannes Idelhauser, Ulrich Beez, Bernhard G. Humm, Paul Walsh
Publicado en: Proceedings of the 2016 European Collaborative Research Conference (CERC 2016), 2016, Página(s) 132 - 145, ISSN 2220-4164
Editor: Cork Institute of Technology

Demonstrating Machine Learning for Cancer Diagnostics

Autores: Paul Walsh, Jennifer Lynch, Cintia Palu NSilico Life Science, Dublin, Ireland Onofrio Gigliotta, Raffaele Di Fuccio University of Naples, Italy
Publicado en: Proceedings of Collaborative European Research Conference (CERC 2019), Edición 2019, 2019, ISSN 2220-4164
Editor: CERC

Machine Learning Approaches to Melanoma Management in a Clinical Setting

Autores: Paul Walsh, Jennifer Lynch, Timothy Manning
Publicado en: Proceedings of Collaborative European Research Conference (CERC 2019), Edición 2019, 2019, ISSN 2220-4164
Editor: CERC

Utilizing High Performance Computing Techniques for efficiently anonymizing sensitive patient data

Autores: Ntalaperas, A. Bouras: A
Publicado en: Proceedings of the Collaborative European Research Conference (CERC 2017), 2017
Editor: Karlsruhe University of Applied Sciences

An approach for anonymization of sensitive clinical and genetic data based on Data Cube Structures

Autores: Dimitrios Ntalaperas
Publicado en: Proceedings of the Collaborative European Research Conference, 2016
Editor: Cork Institute of Technology, Ireland

Thesis and dissertations (1)

Gene Expression Profiling of Melanoma

Autores: David Cormnican, Supervisor: Paul Walsh
Publicado en: MSc Thesis, 2015
Editor: UCC

Book chapters (2)

Personalised Clinical Decision Support for Cancer Care

Autores: Bernhard G. Humm, Paul Walsh
Publicado en: Thomas Hoppe, Bernhard G. Humm, Anatol Reibold (Eds): Semantic Applications - Methodology, Technology, Corporate, 2018, Página(s) 125-143, ISBN 978-3-662-55432-6
Editor: Springer Verlag

Personalised Clinical Decision Support for Cancer Care

Autores: Bernhard G. Humm, Paul Walsh
Publicado en: Semantic Applications - Methodology, Technology, Corporate Use, 2018, Página(s) 125-143, ISBN 978-3-662-55432-6
Editor: Springer Verlag

Peer reviewed articles (1)

Simplicity DiffExpress: a bespoke cloud-based interface for RNA-seq differential expression modeling and analysis

Autores: Cintia Cristina Palu , Marcelo Ribeiro-Alves, Yanxin Wu, Brendan Lawlor, Pavel V Baranov, Brian Kelly and Paul Walsh
Publicado en: Front. Genet. - Bioinformatics and Computational Biology, 2019, ISSN 0000-0000
Editor: Front. Genet. - Bioinformatics and Computational Biology