SemAntically integrating Genomics with Electronic health records for Cancer CARE

Informazioni relative al progetto

SAGE-CARE

ID dell’accordo di sovvenzione: 644186

DOI 10.3030/644186

Progetto chiuso

Data della firma CE 20 Novembre 2014

Data di avvio 1 Dicembre 2014

Data di completamento 30 Novembre 2018

Finanziato da

• EXCELLENT SCIENCE - Marie Skłodowska-Curie Actions

Costo totale € 450 000,00

Contributo UE € 450 000,00

Coordinato da

HOCHSCHULE DARMSTADT (UNIVERSITY OF APPLIED SCIENCES H-DA)
Germany

Risultati finali

Websites, patent fillings, videos etc. (5)

Papers and technical reports

Peer reviewed publications will be submitted as well as white papers etc. to be posted on the project website

Academic papers and technical reports

Peer reviewed academic papers will be submitted and white papers published to the project website

Technical Reports

Technical reports will be publisedh to the project webiste and that of the individual consortium members. Additionally peer reviewed publications may be submitted.

Academic review papers

Peer reviewed papers will be submitted for publication

Peer-reviewed papers & technical reports

Peer reviewed academic papers will be submitted for publication and non-confidential technical reports published on the project website

Demonstrators, pilots, prototypes (1)

Web and mobile user applications

Pilot system rolled out using web and mobile interfaces

Pubblicazioni

Conference proceedings (11)

Flexible yet Efficient Management of Electronic Health Records

Autori: Bernhard G. Humm, Paul Walsh
Pubblicato in: 2015 International Conference on Computational Science and Computational Intelligence (CSCI), 2015, Pagina/e 771-775, ISBN 978-1-4673-9795-7
Editore: IEEE
DOI: 10.1109/CSCI.2015.84

Semantic AutoSuggest for Electronic Health Records

Autori: Ulrich Beez, Bernhard G. Humm, Paul Walsh
Pubblicato in: 2015 International Conference on Computational Science and Computational Intelligence (CSCI), 2015, Pagina/e 760-765, ISBN 978-1-4673-9795-7
Editore: IEEE
DOI: 10.1109/CSCI.2015.85

Rapidly Visualizing NGS Cancer Data Sets with Cloud Computing

Autori: Paul Walsh, Brendan Lawlor, Brian Kelly, Timmy Manning, Timm Heuss and Markus Leopold
Pubblicato in: AVI 2016 INTERNATIONAL WORKING CONFERENCE ON ADVANCED VISUAL INTERFACES, 2016
Editore: FTK

The Weekend Warrior: How to build a genomic supercomputer in your spare time using Streams and Actors in Scala

Autori: Brendan Lawlor and Paul Walsh
Pubblicato in: ScalCom 2016 : The 16th IEEE International Conference on Scalable Computing and Communications, 2016
Editore: IEEE

A Dynamic Product Line for an Electronic Health Record Management System for Cancer Care

Autori: Matthias Coym, Bernhard G. Humm, Patrick Spitzer, Paul Walsh
Pubblicato in: Udo Bleimann, Bernhard Humm, Robert Loew, Stefanie Regier, Ingo Stengel, Paul Walsh (Eds): Proceedings of the Collaborative European Research Conference (CERC 2017), 2017, Pagina/e 134-141, ISSN 2220-4164
Editore: CERC 2019

Evidence-Based Medical Recommendations for Personalized Medicine

Autori: Bernhard G. Humm, Fabian Lamba, Tino Landmann, Marc Steffens, Paul Walsh
Pubblicato in: Udo Bleimann, Bernhard Humm, Robert Loew, Stefanie Regier, Ingo Stengel, Paul Walsh (Eds): Proceedings of the Collaborative European Research Conference (CERC 2017), 2017, Pagina/e 147-155, ISSN 2220-4164
Editore: CERC 2017

A Clinical Decision Support System for Personalized Medicine

Autori: Johannes Idelhauser, Ulrich Beez, Bernhard G. Humm, Paul Walsh
Pubblicato in: Proceedings of the 2016 European Collaborative Research Conference (CERC 2016), 2016, Pagina/e 132 - 145, ISSN 2220-4164
Editore: Cork Institute of Technology

Demonstrating Machine Learning for Cancer Diagnostics

Autori: Paul Walsh, Jennifer Lynch, Cintia Palu NSilico Life Science, Dublin, Ireland Onofrio Gigliotta, Raffaele Di Fuccio University of Naples, Italy
Pubblicato in: Proceedings of Collaborative European Research Conference (CERC 2019), Numero 2019, 2019, ISSN 2220-4164
Editore: CERC

Machine Learning Approaches to Melanoma Management in a Clinical Setting

Autori: Paul Walsh, Jennifer Lynch, Timothy Manning
Pubblicato in: Proceedings of Collaborative European Research Conference (CERC 2019), Numero 2019, 2019, ISSN 2220-4164
Editore: CERC

Utilizing High Performance Computing Techniques for efficiently anonymizing sensitive patient data

Autori: Ntalaperas, A. Bouras: A
Pubblicato in: Proceedings of the Collaborative European Research Conference (CERC 2017), 2017
Editore: Karlsruhe University of Applied Sciences

An approach for anonymization of sensitive clinical and genetic data based on Data Cube Structures

Autori: Dimitrios Ntalaperas
Pubblicato in: Proceedings of the Collaborative European Research Conference, 2016
Editore: Cork Institute of Technology, Ireland

Thesis and dissertations (1)

Gene Expression Profiling of Melanoma

Autori: David Cormnican, Supervisor: Paul Walsh
Pubblicato in: MSc Thesis, 2015
Editore: UCC

Book chapters (2)

Personalised Clinical Decision Support for Cancer Care

Autori: Bernhard G. Humm, Paul Walsh
Pubblicato in: Thomas Hoppe, Bernhard G. Humm, Anatol Reibold (Eds): Semantic Applications - Methodology, Technology, Corporate, 2018, Pagina/e 125-143, ISBN 978-3-662-55432-6
Editore: Springer Verlag

Personalised Clinical Decision Support for Cancer Care

Autori: Bernhard G. Humm, Paul Walsh
Pubblicato in: Semantic Applications - Methodology, Technology, Corporate Use, 2018, Pagina/e 125-143, ISBN 978-3-662-55432-6
Editore: Springer Verlag

Peer reviewed articles (1)

Simplicity DiffExpress: a bespoke cloud-based interface for RNA-seq differential expression modeling and analysis

Autori: Cintia Cristina Palu , Marcelo Ribeiro-Alves, Yanxin Wu, Brendan Lawlor, Pavel V Baranov, Brian Kelly and Paul Walsh
Pubblicato in: Front. Genet. - Bioinformatics and Computational Biology, 2019, ISSN 0000-0000
Editore: Front. Genet. - Bioinformatics and Computational Biology