Chromatin Packing and Architectural Proteins in Plants

Publicaciones

Identification of the sex-determining factor in the liverwort Marchantia polymorpha reveals unique evolution of sex chromosomes in a haploid system

Autores: Miyuki Iwasaki, Tomoaki Kajiwara, Yukiko Yasui, Yoshihiro Yoshitake, Motoki Miyazaki, Shogo Kawamura, Noriyuki Suetsugu, Ryuichi Nishihama, Shohei Yamaoka, Dierk Wanke, Kenji Hashimoto, Kazuyuki Kuchitsu, Sean A. Montgomery, Shilpi Singh, Yasuhiro Tanizawa, Masaru Yagura, Takako Mochizuki, Mika Sakamoto, Yasukazu Nakamura, Chang Liu, Frédéric Berger, Katsuyuki T. Yamato, John L. Bowman, Takayuki
Publicado en: Current Biology, 2021, ISSN 0960-9822
Editor: Cell Press
DOI: 10.1016/j.cub.2021.10.023

Spatial features and functional implications of plant 3D genomes organization

Autores: Katherine Domb, Nan Wang, Guillaume Hummel, Chang Liu
Publicado en: Annual Review of Plant Biology, 2022, ISSN 1543-5008
Editor: Annual Reviews, Inc.
DOI: 10.1146/annurev-arplant-102720-022810

Characterization of a Plant Nuclear Matrix Constituent Protein in Liverwort

Autores: Nan Wang, Ezgi Süheyla Karaaslan, Natalie Faiss, Kenneth Wayne Berendzen, Chang Liu
Publicado en: Frontiers in Plant Science, Edición 12, 2021, ISSN 1664-462X
Editor: Frontiers Media S. A.
DOI: 10.3389/fpls.2021.670306

Polycomb-mediated repression of paternal chromosomes maintains haploid dosage in diploid embryos of Marchantia

Autores: Sean Akira Montgomery, Tetsuya Hisanaga, Nan Wang, Elin Axelsson, Svetlana Akimcheva, Milos Sramek, Chang Liu, Frédéric Berger
Publicado en: Elife, 2022, ISSN 2050-084X
Editor: eLife Sciences Publications
DOI: 10.7554/elife.79258

Isolation of Lineage Specific Nuclei Based on Distinct Endoreduplication Levels and Tissue-Specific Markers to Study Chromatin Accessibility Landscapes

Autores: Ezgi Süheyla Karaaslan, Natalie Faiß, Chang Liu, Kenneth Wayne Berendzen
Publicado en: Plants, Edición 9/11, 2020, Página(s) 1478, ISSN 2223-7747
Editor: MDPI
DOI: 10.3390/plants9111478

The plant nuclear lamina disassembles to regulate genome folding in stress conditions

Autores: Nan Wang, Zhidan Wang, Sofia Tzourtzou, Xu Wang, Xiuli Bi, Julia Leimeister, Linhao Xu, Takuya Sakamoto, Sachihiro Matsunaga, Andreas Schaller, Hua Jiang, and Chang Liu
Publicado en: Nature Plants, 2023, ISSN 2055-0278
Editor: Nature Publishing Group
DOI: 10.1038/s41477-023-01457-2

Organization and epigenomic control of RNA polymerase III-transcribed genes in plants

Autores: Guillaume Hummel, Chang Liu
Publicado en: Current Opinion in Plant Biology, 2022, ISSN 1369-5266
Editor: Elsevier BV
DOI: 10.1016/j.pbi.2022.102199

Plant lamin-like proteins mediate chromatin tethering at the nuclear periphery

Autores: Bo Hu, Nan Wang, Xiuli Bi, Ezgi Süheyla Karaaslan, Anna-Lena Weber, Wangsheng Zhu, Kenneth Wayne Berendzen, Chang Liu
Publicado en: Genome Biology, Edición 20/1, 2019, ISSN 1474-760X
Editor: Springer Nature
DOI: 10.1186/s13059-019-1694-3

Three-dimensional chromatin packing and positioning of plant genomes

Autores: Ezgi Süheyla Doğan, Chang Liu
Publicado en: Nature Plants, Edición 4/8, 2018, Página(s) 521-529, ISSN 2055-0278
Editor: Springer Nature
DOI: 10.1038/s41477-018-0199-5

Implications of liquid–liquid phase separation in plant chromatin organization and transcriptional control

Autores: Nan Wang, Chang Liu
Publicado en: Current Opinion in Genetics & Development, Edición 55, 2019, Página(s) 59-65, ISSN 0959-437X
Editor: Elsevier BV
DOI: 10.1016/j.gde.2019.06.003

Chromatin domains in space and their functional implications

Autores: Frédéric Pontvianne, Chang Liu
Publicado en: Current Opinion in Plant Biology, Edición 54, 2020, Página(s) 1-10, ISSN 1369-5266
Editor: Elsevier BV
DOI: 10.1016/j.pbi.2019.11.005

Chromatin Organization in Early Land Plants Reveals an Ancestral Association between H3K27me3, Transposons, and Constitutive Heterochromatin

Autores: Sean A. Montgomery, Yasuhiro Tanizawa, Bence Galik, Nan Wang, Tasuku Ito, Takako Mochizuki, Svetlana Akimcheva, John L. Bowman, Valérie Cognat, Laurence Maréchal-Drouard, Heinz Ekker, Syuan-Fei Hong, Takayuki Kohchi, Shih-Shun Lin, Li-Yu Daisy Liu, Yasukazu Nakamura, Lia R. Valeeva, Eugene V. Shakirov, Dorothy E. Shippen, Wei-Lun Wei, Masaru Yagura, Shohei Yamaoka, Katsuyuki T. Yamato, Chang Liu
Publicado en: Current Biology, Edición 30/4, 2020, Página(s) 573-588.e7, ISSN 0960-9822
Editor: Cell Press
DOI: 10.1016/j.cub.2019.12.015

Tiding-up the plant nuclear space: domains, function and dynamics

Autores: Ana Paula Santos, Valérie Gaudin, Iva Mozgová, Frédéric Pontvianne, Daniel Schubert, Ahmet L Tek, Martina Dvořáčková, Chang Liu, Paul Fransz, Stefanie Rosa, Sara Farrona
Publicado en: Journal of Experimental Botany, 2020, ISSN 0022-0957
Editor: Oxford University Press
DOI: 10.1093/jxb/eraa282

Marchantia TCP transcription factor activity correlates with three-dimensional chromatin structure

Autores: Ezgi Süheyla Karaaslan, Nan Wang, Natalie Faiß, Yuyu Liang, Sean A. Montgomery, Sascha Laubinger, Kenneth Wayne Berendzen, Frédéric Berger, Holger Breuninger, Chang Liu
Publicado en: Nature Plants, Edición 6/10, 2020, Página(s) 1250-1261, ISSN 2055-0278
Editor: Nature Publishing Group
DOI: 10.1038/s41477-020-00766-0

Study of Cell-Type-Specific Chromatin Organization: In Situ Hi-C Library Preparation for Low-Input Plant Materials

Autores: Nan Wang, Chang Liu
Publicado en: Plant Epigenetics and Epigenomics - Methods and Protocols, Edición 2093, 2020, Página(s) 115-127, ISBN 978-1-0716-0178-5
Editor: Springer US
DOI: 10.1007/978-1-0716-0179-2_9

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