In situ Structural Analysis of Molecular Crowding and Phase Separation

Pubblicazioni

Molecular mechanisms of stress-induced reactivation in mumps virus condensates

Autori: Zhang X, Sridharan S, Zagoriy I, Eugster Oegema C, Ching C, Pflaesterer T, Fung KHH, Poser I, Müller C, Hyman AA, Savitski M, Mahamid J
Pubblicato in: Cell, 2023, ISSN 0092-8674
Editore: Cell Press
DOI: 10.1016/j.cell.2023.03.015

Addressing the challenge of in situ structural studies of RNP granules in light of emerging opportunities

Autori: Zhang X, Mahamid J
Pubblicato in: Current Opinion in Structural Biology, 2020, ISSN 0959-440X
Editore: Elsevier BV
DOI: 10.1016/j.sbi.2020.06.012

Liquid-to-solid phase transition of oskar ribonucleoprotein granules is essential for their function in Drosophila embryonic development.

Autori: Bose M, Lampe M, Mahamid J, Ephrussi A
Pubblicato in: Cell, 2022, ISSN 0092-8674
Editore: Cell Press
DOI: 10.1016/j.cell.2022.02.022

RNA-Induced Conformational Switching and Clustering of G3BP Drive Stress Granule Assembly by Condensation

Autori: Jordina Guillén-Boixet,1,8 Andrii Kopach,3,8 Alex S. Holehouse,2,7 Sina Wittmann,3 Marcus Jahnel,1,3 Raimund Schlüßler,1 Kyoohyun Kim,1 Irmela R.E.A. Trussina,1 Jie Wang,3 Daniel Mateju,3,9 Ina Poser,3 Shovamayee Maharana,1 Martine Ruer-Gruß,3 Doris Richter,1 Xiaojie Zhang,6 Young-Tae Chang,4,5 Jochen Guck,1 Alf Honigmann,3 Julia Mahamid,6 Anthony A. Hyman,3 Rohit V. Pappu,2 Simon Alberti,1,3,
Pubblicato in: Cell, 2020, ISSN 1097-4172
Editore: Cell Press
DOI: 10.1016/j.cell.2020.03.049

Visualizing molecular architectures of cellular condensates: hints of complex coacervation scenarios

Autori: Goetz SK, Mahamid J
Pubblicato in: Developmental Cell, 2020, ISSN 1534-5807
Editore: Cell Press
DOI: 10.1016/j.devcel.2020.09.003

Convolutional networks for supervised mining of molecular patterns within cellular context

Autori: Irene de Teresa; Sara K. Goetz; Alexander Mattausch; Frosina Stojanovska; Christian E. Zimmerli; Mauricio Toro-Nahuelpan; Dorothy W.C. Cheng; Fergus Tollervey; Constantin Pape; Martin Beck; Anna Kreshuk; Julia Mahamid; Judith Zaugg
Pubblicato in: Nature Methods, Numero 1, 2023, ISSN 1548-7105
Editore: Springer Nature
DOI: 10.1038/s41592-022-01746-2

Nuclear pores dilate and constrict in cellulo

Autori: Zimmerli CE, Allegretti M, Rantos V, Goetz SK, Obarska-Kosinska A, Zagoriy I, Halavatyi A, Hummer G, Mahamid J, Kosinski J, Beck M
Pubblicato in: Science, 2021, ISSN 0036-8075
Editore: American Association for the Advancement of Science
DOI: 10.1126/science.abd9776

Multi-particle cryo-EM refinement with M visualizes ribosome-antibiotic complex at 3.5 Å in cells

Autori: Dimitry Tegunov, Liang Xue, Christian Dienemann, Patrick Cramer, Julia Mahamid
Pubblicato in: Nature Methods, Numero 18/2, 2021, Pagina/e 186-193, ISSN 1548-7091
Editore: Nature Publishing Group
DOI: 10.1038/s41592-020-01054-7

In-cell architecture of an actively transcribing-translating expressome

Autori: Francis J. O’Reilly; Liang Xue; Andrea Graziadei; Ludwig Sinn; Swantje Lenz; Dimitry Tegunov; Cedric Blötz; Wim J. H. Hagen; Patrick Cramer; Jörg Stülke; Julia Mahamid; Juri Rappsilber
Pubblicato in: Science, Numero 1, 2020, ISSN 1095-9203
Editore: American Association for the Advancement of Scienc
DOI: 10.1101/2020.02.28.970111

In cell architecture of the nuclear pore complex and snapshots of its turnover

Autori: Matteo Allegretti; Christian E. Zimmerli; Vasileios Rantos; Florian Wilfling; Paolo Ronchi; Herman K.H. Fung; Chia-Wei Lee; Wim Hagen; Beata Turonova; Kai Karius; Xiaojie Zhang; Christoph Müller; Yannick Schwab; Julia Mahamid; Boris Pfander; Jan Kosinski; Martin Beck
Pubblicato in: Nature, Numero 1, 2020, ISSN 1476-4687
Editore: Macmillan Journals ltd.
DOI: 10.1101/2020.02.04.933820

A cryo-FIB lift-out technique enables molecular-resolution cryo-ET within native Caenorhabditis elegans tissue

Autori: Miroslava Schaffer, Stefan Pfeffer, Julia Mahamid, Stephan Kleindiek, Tim Laugks, Sahradha Albert, Benjamin D. Engel, Andreas Rummel, Andrew J. Smith, Wolfgang Baumeister, Juergen M. Plitzko
Pubblicato in: Nature Methods, Numero 16/8, 2019, Pagina/e 757-762, ISSN 1548-7091
Editore: Nature Publishing Group
DOI: 10.1038/s41592-019-0497-5

High-precision targeting workflow for volume electron microscopy.

Autori: Ronchi P, Mizzon G, Machado P, D'Imprima E, Best BT, Cassella L, Schnorrenberg S, Montero MG, Jechlinger M, Ephrussi A, Leptin M, Mahamid J, Schwab Y
Pubblicato in: journal of cell biology, 2021, ISSN 0021-9525
Editore: Rockefeller University Press
DOI: 10.1083/jcb.202104069

Intracellular nanoscale architecture as a master regulator of calcium carbonate crystallization in marine microalgae

Autori: Kadan Y, Tollervey F, Varsano N, Mahamid J, Gal A
Pubblicato in: PNAS, Numero 00278424, 2021, ISSN 0027-8424
Editore: National Academy of Sciences
DOI: 10.1073/pnas.2025670118

Protein condensates as aging Maxwell fluids

Autori: Louise Jawerth, Elisabeth Fischer-Friedrich, Suropriya Saha, Jie Wang, Titus Franzmann, Xiaojie Zhang, Jenny Sachweh, Martine Ruer, Mahdiye Ijavi, Shambaditya Saha, Julia Mahamid, Anthony A. Hyman, Frank Jülicher
Pubblicato in: Science, Numero 370/6522, 2020, Pagina/e 1317-1323, ISSN 0036-8075
Editore: American Association for the Advancement of Science
DOI: 10.1126/science.aaw4951

A modular platform for automated cryo-FIB workflows.

Autori: Klumpe S, Fung HKH, Goetz SK, Zagoriy I, Hampoelz B, Zhang X, Erdmann PS, Baumbach J, Müller CW, Beck M, Plitzko JM, Mahamid J
Pubblicato in: elife, 2021, ISSN 2050-084X
Editore: eLife Sciences Publications
DOI: 10.7554/elife.70506

Locating macromolecular assemblies in cells by 2D template matching with cisTEM.

Autori: Bronwyn A Lucas; Benjamin A Himes; Liang Xue; Timothy Grant; Julia Mahamid; Nikolaus Grigorieff
Pubblicato in: eLife, Numero 2050084X, 2021, ISSN 2050-084X
Editore: eLife Sciences Publications
DOI: 10.7554/elife.68946

Tailoring cryo-electron microscopy grids by photo-micropatterning for in-cell structural studies

Autori: Mauricio Toro-Nahuelpan; Ievgeniia Zagoriy; Fabrice Senger; Laurent Blanchoin; Manuel Théry; Julia Mahamid
Pubblicato in: Nature Methods, Numero 1, 2020, ISSN 1548-7105
Editore: Nature Pub. Group
DOI: 10.1101/676189

Cryo-Electron Tomography of Reconstituted Biomolecular Condensate

Autori: Tollervey F, Zhang X, Bose M, Sachweh J, Woodruff JB, Franzmann TM, Mahamid J
Pubblicato in: Methods in Molecular Biology - volume on “Phase-Separated Biomolecular Condensates”, Numero MIMB,volume 2563, 2022, Pagina/e pp 297–324, ISBN 978-1-0716-2663-4
Editore: Springer
DOI: 10.1007/978-1-0716-2663-4_15

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