Cellular innovation driving nervous system evolution

Información del proyecto

NeuralCellTypeEvo

Identificador del acuerdo de subvención: 788921

DOI

10.3030/788921

Proyecto cerrado

Fecha de la firma de la CE 30 Mayo 2018

Fecha de inicio 1 Junio 2018

Fecha de finalización 31 Mayo 2024

Financiado con arreglo a

• EXCELLENT SCIENCE - European Research Council (ERC)

Coste total

€ 2 500 000,00

Aportación de la UE

€ 2 500 000,00

Coordinado por

EUROPEAN MOLECULAR BIOLOGY LABORATORY
Germany

CORDIS proporciona enlaces a los documentos públicos y las publicaciones de los proyectos de los programas marco HORIZONTE.

Los enlaces a los documentos y las publicaciones de los proyectos del Séptimo Programa Marco, así como los enlaces a algunos tipos de resultados específicos, como conjuntos de datos y «software», se obtienen dinámicamente de OpenAIRE .

Publicaciones

Peer reviewed articles (17)

A lamprey neural cell type atlas illuminates the origins of the vertebrate brain

Autores: Francesco Lamanna, Francisca Hervas-Sotomayor, A. Phillip Oel, David Jandzik, Daniel Sobrido-Cameán, Gabriel N. Santos-Durán, Megan L. Martik, Jan Stundl, Stephen A. Green, Thoomke Brüning, Katharina Mößinger, Julia Schmidt, Celine Schneider, Mari Sepp, Florent Murat, Jeramiah J. Smith, Marianne E. Bronner, María Celina Rodicio, Antón Barreiro-Iglesias, Daniel M. Medeiros, Detlev Arendt, He
Publicado en: Nat Ecol Evol., 2023, ISSN 2397-334X
Editor: Springer Nature
DOI: 10.1038/s41559-023-02170-1

Elementary nervous systems

Autores: Detlev Arendt
Publicado en: Philosophical Transactions of the Royal Society B: Biological Sciences, Edición 376/1821, 2021, Página(s) 20200347, ISSN 0962-8436
Editor: Royal Society of London
DOI: 10.1098/rstb.2020.0347

Cross-phyla protein annotation by structural prediction and alignment

Autores: Fabian Ruperti; Nikolaos Papadopoulos; Jacob M. Musser; Milot Mirdita; Martin Steinegger; Detlev Arendt
Publicado en: Genome Biology, Vol 24, Iss 1, Pp 1-21 (2023), Edición 5, 2023, ISSN 1465-6906
Editor: Springer Nature
DOI: 10.1186/s13059-023-02942-9

MorphoFeatures for unsupervised exploration of cell types, tissues, and organs in volume electron microscopy

Autores: Valentyna Zinchenko, Johannes Hugger, Virginie Uhlmann, Detlev Arendt, and Anna Kreshuk
Publicado en: elife, 2023, ISSN 2050-084X
Editor: eLife Sciences Publications
DOI: 10.7554/elife.80918

Molecular profiling of sponge deflation reveals an ancient relaxant-inflammatory response

Autores: Fabian Ruperti, Isabelle Becher, Anniek Stokkermans, Ling Wang, Nick Marschlich, Clement Potel, Emanuel Maus, Frank Stein, Bernhard Drotleff, Klaske J. Schippers, Michael Nickel, Robert Prevedel, Jacob M. Musser, Mikhail M. Savitski, Detlev Arendt
Publicado en: Current Biology, 2024, ISSN 0960-9822
Editor: Cell Press
DOI: 10.1016/j.cub.2023.12.021

The conserved core of the nereid brain: Circular CNS, apical nervous system and lhx6-arx-dlx neurons

Autores: Detlev Arendt, Idoia Quintana Urzainqui, Hernando Martínez Vergara
Publicado en: Current Opinion in Neurobiology, 2021, ISSN 0959-4388
Editor: Elsevier BV
DOI: 10.1016/j.conb.2021.11.008

The Nereid on the rise: Platynereis as a model system.

Autores: B. Duygu Özpolat; Nadine Randel; Elizabeth A Williams; Luis A Bezares-Calderón; Gabriele Andreatta; Guillaume Balavoine; Paola Bertucci; David E. K. Ferrier; Maria Cristina Gambi; Eve Gazave; Mette Handberg-Thorsager; Jörg D. Hardege; Cameron Hird; Yu-Wen Hsieh; Jerome H.L. Hui; Kevin Nzumbi Mutemi; Stephan Schneider; Oleg Simakov; Hernando Martínez Vergara; Michel Vervoort; Gáspár Jékely;
Publicado en: EvoDevo, 2021, ISSN 2041-9139
Editor: BioMed Central
DOI: 10.17863/cam.78076

The Evolutionary Assembly of Neuronal Machinery

Autores: Detlev Arendt
Publicado en: Current Biology, Edición 30/10, 2020, Página(s) R603-R616, ISSN 0960-9822
Editor: Cell Press
DOI: 10.1016/j.cub.2020.04.008

Evolution of neuronal types and families

Autores: Detlev Arendt, Paola Yanina Bertucci, Kaia Achim, Jacob M Musser
Publicado en: Current Opinion in Neurobiology, Edición 56, 2019, Página(s) 144-152, ISSN 0959-4388
Editor: Elsevier BV
DOI: 10.1016/j.conb.2019.01.022

Mapping single-cell atlases throughout Metazoa unravels cell type evolution

Autores: Tarashanksy, A. J., Musser, J. M., Khariton, M., Li, P., Arendt, D., Quake, S. R., Wang, B.
Publicado en: eLife, Edición eLife 2021;10:e66747, 2021, ISSN 2050-084X
Editor: eLife Sciences Publications
DOI: 10.1101/2020.09.28.317784

The dorsoanterior brain of adult amphioxus shares similarities in expression profile and neuronal composition with the vertebrate telencephalon

Autores: Èlia Benito-Gutiérrez, Manuel Stemmer, Silvia D Rohr, Laura N Schuhmacher, Jocelyn Tang, Aleksandra Marconi, Gáspár Jékely, Detlev Arendt
Publicado en: BMC Biology, Edición 2021 May 21;19(1):110, 2021, ISSN 1741-7007
Editor: BioMed Central
DOI: 10.1101/307629

MoBIE: a Fiji plugin for sharing and exploration of multi-modal cloud-hosted big image data.

Autores: Constantin Pape, Kimberly Meechan, Ekaterina Moreva, Martin Schorb, Nicolas Chiaruttini, Valentyna Zinchenko, Hernando Martinez Vergara, Giulia Mizzon, Josh Moore, Detlev Arendt, Anna Kreshuk, Yannick Schwab, Christian Tischer
Publicado en: Nature Methods, 2023, ISSN 1548-7091
Editor: Nature Publishing Group
DOI: 10.1038/s41592-023-01776-4

Profiling cellular diversity in sponges informs animal cell type and nervous system evolution

Autores: Jacob M. Musser, Klaske J. Schippers, Michael Nickel, Giulia Mizzon, Andrea B. Kohn,Constantin Pape, Paolo Ronchi, Nikolaos Papadopoulos, Alexander J. Tarashansky,Jörg U. Hammel, Florian Wolf, Cong Liang, Ana Hernández-Plaza, Carlos P. Cantalapiedra,Kaia Achim, Nicole L. Schieber, Leslie Pan, Fabian Ruperti1,, Warren R. Francis, Sergio Vargas,Svenja Kling, Maike Renkert, Maxim Polikarpov,, Gleb
Publicado en: Science, 2021, ISSN 0036-8075
Editor: American Association for the Advancement of Science
DOI: 10.1101/758276

Whole-body integration of gene expression and single-cell morphology

Autores: Vergara, H. M., Pape, C., Meechan, K. I., Zinchenko, V., Genoud, C., Wanner, A. A., Titze, B., Templin, R. M., Bertucci, P. Y., Simakov, O., Machado, P., Savage, E. L., Schwab, Y., Friedrich, R. W., Kreshuk, A., Tischer, C., Arendt, D.
Publicado en: Cell, Edición Cell, 184, 1-19, 2020, ISSN 0092-8674
Editor: Cell Press
DOI: 10.1101/2020.02.26.961037

Many Ways to Build a Polyp

Autores: Detlev Arendt
Publicado en: Trends in Genetics, Edición 35/12, 2019, Página(s) 885-887, ISSN 0168-9525
Editor: Elsevier BV
DOI: 10.1016/j.tig.2019.09.003

Single cell RNA sequencing of the Strongylocentrotus purpuratus larva reveals the blueprint of major cell types and nervous system of a non-chordate deuterostome.

Autores: Periklis Paganos; Danila Voronov; Jacob M. Musser; Detlev Arendt; Maria Ina Arnone
Publicado en: eLife, 2021, ISSN 2050-084X
Editor: eLife Sciences Publications
DOI: 10.7554/elife.70416

Characterization of eyes, photoreceptors, and opsins in developmental stages of the arrow worm Spadella cephaloptera (Chaetognatha)

Autores: Tim Wollesen, Sonia V. Rodriguez Monje, Adam P. Oel, Detlev Arendt
Publicado en: J Exp Zool B Mol Dev Evol, 2023, ISSN 1552-5007
Editor: John Wiley & Sons Ltd.
DOI: 10.1002/jez.b.23193

Other (6)

Beyond sequence similarity: cross-phyla protein annotation by structural prediction and alignment

Autores: Fabian Ruperti, Nikolaos Papadopoulos, Jacob Musser, Milot Mirdita, Martin Steinegger, Detlev Arendt
Publicado en: Biorxiv, 2022
Editor: Cold Spring Harbor
DOI: 10.1101/2022.07.05.498892

Single cell RNA sequencing of the Strongylocentrotus purpuratus larva reveals the blueprint of major cell types and nervous system of a non-chordate deuterostome

Autores: Paganos, P., Voronov, D., Musser, J. M. Arendt, D., Arnone, M. I
Publicado en: bioXriv, 2021
Editor: Cold Spring Harbor Laboratory
DOI: 10.1101/2021.03.16.435574

MorphoFeatures: unsupervised exploration of cell types, tissues and organs in volume electron microscopy

Autores: Valentyna Zinchenko, Johannes Hugger, Virginie Uhlmann, Detlev Arendt, Anna Kreshuk
Publicado en: BioRxiv, 2022
Editor: CSHL
DOI: 10.1101/2022.05.07.490949

Characterization of eyes, photoreceptors and opsins in developmental stages of the chaetognath Spadella cephaloptera

Autores: Tim Wollesena, Sonia Victoria Rodríguez Monje, Adam Phillip Oel, and Detlev Arendt
Publicado en: bioXriv, 2019
Editor: Cold Spring Harbor Laboratory
DOI: 10.1101/871111

MoBIE: A Fiji plugin for sharing and exploration of multi-modal cloud-hosted big image data

Autores: Constantin Pape, Kimberly Meechan, Ekaterina Moreva, Martin Schorb, Nicolas Chiaruttini, Valentyna Zinchenko, Hernando Vergara, Giulia Mizzon, Josh Moore, Detlev Arendt, Anna Kreshuk, Yannick Schwab, Christian Tischer
Publicado en: BioRxiv, 2022
Editor: CSHL
DOI: 10.1101/2022.05.27.493763

Reconstructing the ancestral vertebrate brain using a lamprey neural cell type atlas

Autores: Francesco Lamanna, Francisca Hervas-Sotomayor, A. Phillip Oel, David Jandzik, Daniel Sobrido-Cameán, Megan L. Martik, Stephen A. Green, Thoomke Brüning, Katharina Mößinger, Julia Schmidt, Celine Schneider, Mari Sepp, Florent Murat, Jeramiah J. Smith, Marianne E. Bronner, María Celina Rodicio, Antón Barreiro-Iglesias, Daniel M. Medeiros, Detlev Arendt, Henrik Kaessmann.
Publicado en: Biorxiv, 2022
Editor: Cold Spring Harbor
DOI: 10.1101/2022.02.28.482278