Linking livestock genetic diversity with three thousand years of agricultural crises and resilience

Información del proyecto

PALAEOFARM

Identificador del acuerdo de subvención: 853272

DOI

10.3030/853272

Fecha de la firma de la CE 20 Noviembre 2019

Fecha de inicio 1 Septiembre 2020

Fecha de finalización 28 Febrero 2027

Financiado con arreglo a

• EXCELLENT SCIENCE - European Research Council (ERC)

Coste total

€ 1 499 998,00

Aportación de la UE

€ 1 499 998,00

Coordinado por

LUDWIG-MAXIMILIANS-UNIVERSITAET MUENCHEN
Germany

CORDIS proporciona enlaces a los documentos públicos y las publicaciones de los proyectos de los programas marco HORIZONTE.

Los enlaces a los documentos y las publicaciones de los proyectos del Séptimo Programa Marco, así como los enlaces a algunos tipos de resultados específicos, como conjuntos de datos y «software», se obtienen dinámicamente de OpenAIRE .

Publicaciones

Peer reviewed articles (14)

Grey wolf genomic history reveals a dual ancestry of dogs

Autores: Anders Bergström; David W. G. Stanton; Ulrike H. Taron; Laurent Frantz; Mikkel-Holger S. Sinding; Erik Ersmark; Saskia Pfrengle; Molly Cassatt-Johnstone; Ophélie Lebrasseur; Linus Girdland-Flink; Daniel M. Fernandes; Morgane Ollivier; Leo Speidel; Shyam Gopalakrishnan; Michael V. Westbury; Jazmin Ramos-Madrigal; Tatiana R. Feuerborn; Ella Reiter; Joscha Gretzinger; Susanne C. Münzel; Pooja Swal
Publicado en: Nature, 2022, ISSN 0028-0836
Editor: Nature Publishing Group
DOI: 10.1038/s41586-022-04824-9

Ancient chicken remains reveal the origins of virulence in Marek’s disease virus

Autores: Steven R. Fiddaman, Evangelos A. Dimopoulos, Ophélie Lebrasseur, Louis du Plessis, Bram Vrancken, Sophy Charlton, Ashleigh F. Haruda, Kristina Tabbada, Patrik G. Flammer, Stefan Dascalu, Nemanja Marković, Hannah Li, Gabrielle Franklin, Robert Symmons, Henriette Baron, László Daróczi-Szabó, Dilyara N. Shaymuratova, Igor V. Askeyev, Olivier Putelat, Maria Sana, Hossein Davoudi, Homa Fathi, Ami
Publicado en: Science, Edición 382, 2024, Página(s) 1276-1281, ISSN 0036-8075
Editor: American Association for the Advancement of Science
DOI: 10.1126/science.adg2238

The biocultural origins and dispersal of domestic chickens

Autores: Joris Peters, Ophélie Lebrasseur, Evan K Irving-Pease, Ptolemaios Dimitrios Paxinos, Julia Best, Riley Smallman, Cécile Callou, Armelle Gardeisen, Simon Trixl, Laurent Frantz, Naomi Sykes, Dorian Q Fuller, Greger Larson
Publicado en: Proceedings of the National Academy of Sciences, 2023, ISSN 0027-8424
Editor: National Academy of Sciences
DOI: 10.1073/pnas.2121978119

Genome sequencing of 2000 canids by the Dog10K consortium advances the understanding of demography, genome function and architecture.

Autores: Jennifer R. S. Meadows, Jeffrey M. Kidd, Guo-Dong Wang, Heidi G. Parker, Peter Z. Schall, Matteo Bianchi, Matthew J. Christmas, Katia Bougiouri, Reuben M. Buckley, Christophe Hitte, Anthony K. Nguyen, Chao Wang, Vidhya Jagannathan, Julia E. Niskanen, Laurent A. F. Frantz, Meharji Arumilli, Sruthi Hundi, Kerstin Lindblad-Toh, Catarina Ginja, Kadek Karang Agustina, Catherine André, Adam R. Boyko, B
Publicado en: Genome Biology, 2023, ISSN 1474-760X
Editor: BioMed Central
DOI: 10.1186/s13059-023-03023-7

Modern Siberian dog ancestry was shaped by several thousand years of Eurasian-wide trade and human dispersal

Autores: Tatiana R Feuerborn, Alberto Carmagnini, Robert J Losey, Tatiana Nomokonova, Arthur Askeyev, Igor Askeyev, Oleg Askeyev, Ekaterina E Antipina, Martin Appelt, Olga P Bachura, Fiona Beglane, Daniel G Bradley, Kevin G Daly, Shyam Gopalakrishnan, Kristian Murphy Gregersen, Chunxue Guo, Andrei V Gusev, Carleton Jones, Pavel A Kosintsev, Yaroslav V Kuzmin, Valeria Mattiangeli, Angela R Perri, Andrei V P
Publicado en: PNAS, 2021, ISSN 0027-8424
Editor: National Academy of Sciences
DOI: 10.1073/pnas.2100338118

Understanding the evolution of immune genes in jawed vertebrates

Autores: Michal Vinkler; Steven R. Fiddaman; Martin Těšický; Emily A. O'Connor; Anna E. Savage; Tobias L. Lenz; Adrian L. Smith; Jim Kaufman; Daniel I. Bolnick; Charli S. Davies; Neira Dedić; Andrew S. Flies; M. Mercedes Gómez Samblás; Amberleigh E. Henschen; Karel Novák; Gemma Palomar; Nynke Raven; Kalifa Samaké; Joel Slade; Nithya Kuttiyarthu Veetil; Eleni Voukali; Jacob Höglund; David S. Richar
Publicado en: Journal of Evolutionary Biology, 2023, ISSN 1010-061X
Editor: Blackwell Publishing Inc.
DOI: 10.1111/jeb.14181

Fourth Report on Chicken Genes and Chromosomes 2022

Autores: Jacqueline Smith, James M Alfieri, Nick Anthony, Peter Arensburger, Giridhar N Athrey, Jennifer Balacco, Adam Balic, Philippe Bardou, Paul Barela, Yves Bigot, Heath Blackmon, Pavel M Borodin, Rachel Carroll, Meya C Casono, Mathieu Charles, Hans Cheng, Maddie Chiodi, Lacey Cigan, Lyndon M Coghill, Richard Crooijmans, Neelabja Das, Sean Davey, Asya Davidian, Fabien Degalez, Jack M Dekkers, Martijn D
Publicado en: Cytogenetic and Genome Research, 2023, ISSN 1424-8581
Editor: S. Karger AG
DOI: 10.1159/000529376

Pleistocene origins, western ghost lineages, and the emerging phylogeographic history of the red wolf and coyote.

Autores: Benjamin N. Sacks; Kieren J. Mitchell; Cate B. Quinn; Lauren M. Hennelly; Mikkel-Holger S. Sinding; Mark J. Statham; Sophie Preckler-Quisquater; Steven R. Fain; Logan Kistler; Stevi Lee Vanderzwan; Julie Meachen; Elaine A. Ostrander; Laurent A. F. Frantz; Laurent A. F. Frantz
Publicado en: Molecular Ecology, Edición 1, 2021, ISSN 0962-1083
Editor: Blackwell Publishing Inc.
DOI: 10.1111/mec.16048

Adaptation and Cryptic Pseudogenization in Penguin Toll-Like Receptors

Autores: Steven R Fiddaman, Michal Vinkler, Simon G Spiro, Hila Levy, Christopher A Emerling, Amy C Boyd, Evangelos A Dimopoulos, Juliana A Vianna, Theresa L Cole, Hailin Pan, Miaoquan Fang, Guojie Zhang, Tom Hart, Laurent A F Frantz, Adrian L Smith
Publicado en: Molecular Biology and Evolution, 2021, ISSN 0737-4038
Editor: Oxford University Press
DOI: 10.1093/molbev/msab354

Dire wolves were the last of an ancient New World canid lineage

Autores: Angela R. Perri; Kieren J. Mitchell; Alice Mouton; Sandra Álvarez-Carretero; Ardern Hulme-Beaman; Ardern Hulme-Beaman; James Haile; Alexandra Jamieson; Julie Meachen; Audrey T. Lin; Audrey T. Lin; Blaine W. Schubert; Carly Ameen; Ekaterina Antipina; Pere Bover; Selina Brace; Alberto Carmagnini; Christian Carøe; José Alfredo Samaniego Castruita; James C. Chatters; Keith Dobney; Mario dos Reis; A
Publicado en: Nature, 2021, ISSN 0028-0836
Editor: Nature Publishing Group
DOI: 10.1038/s41586-020-03082-x

Natural and human-driven selection of a single non-coding body size variant in ancient and modern canids

Autores: Jocelyn Plassais, Heidi G Parker, Alberto Carmagnini, Nicolas Dubos, Ilenia Papa, Kevin Bevant, Thomas Derrien, Lauren M Hennelly, D Thad Whitaker, Alex C Harris, Andrew N Hogan, Heather J Huson, Victor F Zaibert, Anna Linderholm, James Haile, Thierry Fest, Bilal Habib, Benjamin N Sacks, Norbert Benecke, Alan K Outram, Mikhail V Sablin, Mietje Germonpré, Greger Larson, Laurent Frantz, Elaine A Os
Publicado en: Current Biology, 2022, ISSN 0960-9822
Editor: Cell Press
DOI: 10.1016/j.cub.2021.12.036

The genomic history and global expansion of domestic donkeys

Autores: Evelyn T. Todd; Laure Tonasso-Calvière; Loreleï Chauvey; Stéphanie Schiavinato; Antoine Fages; Andaine Seguin-Orlando; Pierre Clavel; Naveed Khan; Lucía Pérez Pardal; Laura Patterson Rosa; Pablo Librado; Harald Ringbauer; Marta Verdugo; John Southon; Jean-Marc Aury; Aude Perdereau; Emmanuelle Vila; Matilde Marzullo; Ornella Prato; Umberto Tecchiati; Giovanna Bagnasco Gianni; Antonio Tagliacoz
Publicado en: Science, 2022, ISSN 0036-8075
Editor: American Association for the Advancement of Science
DOI: 10.1126/science.abo3503

Population genomic, olfactory, dietary, and gut microbiota analyses demonstrate the unique evolutionary trajectory of feral pigs

Autores: Simona Petrelli,Maria Buglione,Valeria Maselli,Claudia Troiano,Greger Larson,Laurent Frantz,Aurelie Manin,Ezio Ricca,Loredana Baccigalupi,Dominic Wright,Christian Pietri,Domenico Fulgione
Publicado en: Molecular Ecology, 2021, ISSN 0962-1083
Editor: Blackwell Publishing Inc.
DOI: 10.1111/mec.16238

HAYSTAC: A Bayesian framework for robust and rapid species identification in high-throughput sequencing data

Autores: Evangelos A. Dimopoulos, Alberto Carmagnini, Irina M. Velsko, Christina Warinner, Greger Larson, Laurent A. F. Frantz, Evan K. Irving-Pease
Publicado en: PLoS Computational Biology, 2022, ISSN 1553-734X
Editor: Public Library of Science
DOI: 10.1371/journal.pcbi.1010493