Linking livestock genetic diversity with three thousand years of agricultural crises and resilience

Informazioni relative al progetto

PALAEOFARM

ID dell’accordo di sovvenzione: 853272

DOI

10.3030/853272

Data della firma CE 20 Novembre 2019

Data di avvio 1 Settembre 2020

Data di completamento 28 Febbraio 2027

Finanziato da

• EXCELLENT SCIENCE - European Research Council (ERC)

Costo totale

€ 1 499 998,00

Contributo UE

€ 1 499 998,00

Coordinato da

LUDWIG-MAXIMILIANS-UNIVERSITAET MUENCHEN
Germany

CORDIS fornisce collegamenti ai risultati finali pubblici e alle pubblicazioni dei progetti ORIZZONTE.

I link ai risultati e alle pubblicazioni dei progetti del 7° PQ, così come i link ad alcuni tipi di risultati specifici come dataset e software, sono recuperati dinamicamente da .OpenAIRE .

Pubblicazioni

Peer reviewed articles (14)

Grey wolf genomic history reveals a dual ancestry of dogs

Autori: Anders Bergström; David W. G. Stanton; Ulrike H. Taron; Laurent Frantz; Mikkel-Holger S. Sinding; Erik Ersmark; Saskia Pfrengle; Molly Cassatt-Johnstone; Ophélie Lebrasseur; Linus Girdland-Flink; Daniel M. Fernandes; Morgane Ollivier; Leo Speidel; Shyam Gopalakrishnan; Michael V. Westbury; Jazmin Ramos-Madrigal; Tatiana R. Feuerborn; Ella Reiter; Joscha Gretzinger; Susanne C. Münzel; Pooja Swal
Pubblicato in: Nature, 2022, ISSN 0028-0836
Editore: Nature Publishing Group
DOI: 10.1038/s41586-022-04824-9

Ancient chicken remains reveal the origins of virulence in Marek’s disease virus

Autori: Steven R. Fiddaman, Evangelos A. Dimopoulos, Ophélie Lebrasseur, Louis du Plessis, Bram Vrancken, Sophy Charlton, Ashleigh F. Haruda, Kristina Tabbada, Patrik G. Flammer, Stefan Dascalu, Nemanja Marković, Hannah Li, Gabrielle Franklin, Robert Symmons, Henriette Baron, László Daróczi-Szabó, Dilyara N. Shaymuratova, Igor V. Askeyev, Olivier Putelat, Maria Sana, Hossein Davoudi, Homa Fathi, Ami
Pubblicato in: Science, Numero 382, 2024, Pagina/e 1276-1281, ISSN 0036-8075
Editore: American Association for the Advancement of Science
DOI: 10.1126/science.adg2238

The biocultural origins and dispersal of domestic chickens

Autori: Joris Peters, Ophélie Lebrasseur, Evan K Irving-Pease, Ptolemaios Dimitrios Paxinos, Julia Best, Riley Smallman, Cécile Callou, Armelle Gardeisen, Simon Trixl, Laurent Frantz, Naomi Sykes, Dorian Q Fuller, Greger Larson
Pubblicato in: Proceedings of the National Academy of Sciences, 2023, ISSN 0027-8424
Editore: National Academy of Sciences
DOI: 10.1073/pnas.2121978119

Genome sequencing of 2000 canids by the Dog10K consortium advances the understanding of demography, genome function and architecture.

Autori: Jennifer R. S. Meadows, Jeffrey M. Kidd, Guo-Dong Wang, Heidi G. Parker, Peter Z. Schall, Matteo Bianchi, Matthew J. Christmas, Katia Bougiouri, Reuben M. Buckley, Christophe Hitte, Anthony K. Nguyen, Chao Wang, Vidhya Jagannathan, Julia E. Niskanen, Laurent A. F. Frantz, Meharji Arumilli, Sruthi Hundi, Kerstin Lindblad-Toh, Catarina Ginja, Kadek Karang Agustina, Catherine André, Adam R. Boyko, B
Pubblicato in: Genome Biology, 2023, ISSN 1474-760X
Editore: BioMed Central
DOI: 10.1186/s13059-023-03023-7

Modern Siberian dog ancestry was shaped by several thousand years of Eurasian-wide trade and human dispersal

Autori: Tatiana R Feuerborn, Alberto Carmagnini, Robert J Losey, Tatiana Nomokonova, Arthur Askeyev, Igor Askeyev, Oleg Askeyev, Ekaterina E Antipina, Martin Appelt, Olga P Bachura, Fiona Beglane, Daniel G Bradley, Kevin G Daly, Shyam Gopalakrishnan, Kristian Murphy Gregersen, Chunxue Guo, Andrei V Gusev, Carleton Jones, Pavel A Kosintsev, Yaroslav V Kuzmin, Valeria Mattiangeli, Angela R Perri, Andrei V P
Pubblicato in: PNAS, 2021, ISSN 0027-8424
Editore: National Academy of Sciences
DOI: 10.1073/pnas.2100338118

Understanding the evolution of immune genes in jawed vertebrates

Autori: Michal Vinkler; Steven R. Fiddaman; Martin Těšický; Emily A. O'Connor; Anna E. Savage; Tobias L. Lenz; Adrian L. Smith; Jim Kaufman; Daniel I. Bolnick; Charli S. Davies; Neira Dedić; Andrew S. Flies; M. Mercedes Gómez Samblás; Amberleigh E. Henschen; Karel Novák; Gemma Palomar; Nynke Raven; Kalifa Samaké; Joel Slade; Nithya Kuttiyarthu Veetil; Eleni Voukali; Jacob Höglund; David S. Richar
Pubblicato in: Journal of Evolutionary Biology, 2023, ISSN 1010-061X
Editore: Blackwell Publishing Inc.
DOI: 10.1111/jeb.14181

Fourth Report on Chicken Genes and Chromosomes 2022

Autori: Jacqueline Smith, James M Alfieri, Nick Anthony, Peter Arensburger, Giridhar N Athrey, Jennifer Balacco, Adam Balic, Philippe Bardou, Paul Barela, Yves Bigot, Heath Blackmon, Pavel M Borodin, Rachel Carroll, Meya C Casono, Mathieu Charles, Hans Cheng, Maddie Chiodi, Lacey Cigan, Lyndon M Coghill, Richard Crooijmans, Neelabja Das, Sean Davey, Asya Davidian, Fabien Degalez, Jack M Dekkers, Martijn D
Pubblicato in: Cytogenetic and Genome Research, 2023, ISSN 1424-8581
Editore: S. Karger AG
DOI: 10.1159/000529376

Pleistocene origins, western ghost lineages, and the emerging phylogeographic history of the red wolf and coyote.

Autori: Benjamin N. Sacks; Kieren J. Mitchell; Cate B. Quinn; Lauren M. Hennelly; Mikkel-Holger S. Sinding; Mark J. Statham; Sophie Preckler-Quisquater; Steven R. Fain; Logan Kistler; Stevi Lee Vanderzwan; Julie Meachen; Elaine A. Ostrander; Laurent A. F. Frantz; Laurent A. F. Frantz
Pubblicato in: Molecular Ecology, Numero 1, 2021, ISSN 0962-1083
Editore: Blackwell Publishing Inc.
DOI: 10.1111/mec.16048

Adaptation and Cryptic Pseudogenization in Penguin Toll-Like Receptors

Autori: Steven R Fiddaman, Michal Vinkler, Simon G Spiro, Hila Levy, Christopher A Emerling, Amy C Boyd, Evangelos A Dimopoulos, Juliana A Vianna, Theresa L Cole, Hailin Pan, Miaoquan Fang, Guojie Zhang, Tom Hart, Laurent A F Frantz, Adrian L Smith
Pubblicato in: Molecular Biology and Evolution, 2021, ISSN 0737-4038
Editore: Oxford University Press
DOI: 10.1093/molbev/msab354

Dire wolves were the last of an ancient New World canid lineage

Autori: Angela R. Perri; Kieren J. Mitchell; Alice Mouton; Sandra Álvarez-Carretero; Ardern Hulme-Beaman; Ardern Hulme-Beaman; James Haile; Alexandra Jamieson; Julie Meachen; Audrey T. Lin; Audrey T. Lin; Blaine W. Schubert; Carly Ameen; Ekaterina Antipina; Pere Bover; Selina Brace; Alberto Carmagnini; Christian Carøe; José Alfredo Samaniego Castruita; James C. Chatters; Keith Dobney; Mario dos Reis; A
Pubblicato in: Nature, 2021, ISSN 0028-0836
Editore: Nature Publishing Group
DOI: 10.1038/s41586-020-03082-x

Natural and human-driven selection of a single non-coding body size variant in ancient and modern canids

Autori: Jocelyn Plassais, Heidi G Parker, Alberto Carmagnini, Nicolas Dubos, Ilenia Papa, Kevin Bevant, Thomas Derrien, Lauren M Hennelly, D Thad Whitaker, Alex C Harris, Andrew N Hogan, Heather J Huson, Victor F Zaibert, Anna Linderholm, James Haile, Thierry Fest, Bilal Habib, Benjamin N Sacks, Norbert Benecke, Alan K Outram, Mikhail V Sablin, Mietje Germonpré, Greger Larson, Laurent Frantz, Elaine A Os
Pubblicato in: Current Biology, 2022, ISSN 0960-9822
Editore: Cell Press
DOI: 10.1016/j.cub.2021.12.036

The genomic history and global expansion of domestic donkeys

Autori: Evelyn T. Todd; Laure Tonasso-Calvière; Loreleï Chauvey; Stéphanie Schiavinato; Antoine Fages; Andaine Seguin-Orlando; Pierre Clavel; Naveed Khan; Lucía Pérez Pardal; Laura Patterson Rosa; Pablo Librado; Harald Ringbauer; Marta Verdugo; John Southon; Jean-Marc Aury; Aude Perdereau; Emmanuelle Vila; Matilde Marzullo; Ornella Prato; Umberto Tecchiati; Giovanna Bagnasco Gianni; Antonio Tagliacoz
Pubblicato in: Science, 2022, ISSN 0036-8075
Editore: American Association for the Advancement of Science
DOI: 10.1126/science.abo3503

Population genomic, olfactory, dietary, and gut microbiota analyses demonstrate the unique evolutionary trajectory of feral pigs

Autori: Simona Petrelli,Maria Buglione,Valeria Maselli,Claudia Troiano,Greger Larson,Laurent Frantz,Aurelie Manin,Ezio Ricca,Loredana Baccigalupi,Dominic Wright,Christian Pietri,Domenico Fulgione
Pubblicato in: Molecular Ecology, 2021, ISSN 0962-1083
Editore: Blackwell Publishing Inc.
DOI: 10.1111/mec.16238

HAYSTAC: A Bayesian framework for robust and rapid species identification in high-throughput sequencing data

Autori: Evangelos A. Dimopoulos, Alberto Carmagnini, Irina M. Velsko, Christina Warinner, Greger Larson, Laurent A. F. Frantz, Evan K. Irving-Pease
Pubblicato in: PLoS Computational Biology, 2022, ISSN 1553-734X
Editore: Public Library of Science
DOI: 10.1371/journal.pcbi.1010493