Technologies of the Future for Low-Cost Enzymes for Environment-Friendly Products

CORDIS fournit des liens vers les livrables publics et les publications des projets HORIZON.

Les liens vers les livrables et les publications des projets du 7e PC, ainsi que les liens vers certains types de résultats spécifiques tels que les jeux de données et les logiciels, sont récupérés dynamiquement sur OpenAIRE .

Livrables

Online web tool for performing HMM searches

This deliverable will consist in an online semi-automatic web tool for performing Hidden-Markov-Model (HMM) seach for sequences of interest. More in details, will consist in a publicly available user-friendly and open-source semi-automatic informatic tool for screening, through Hidden-Markov-Model (HMM) searches, full lenght chain sequences encoding enzymes relevant to FuturEnzyme from public repositories. The tool will be accompanied by a report detailing the functioning of the tool and the scores, e-values, sequence identities, sequence coverages, etc., applied.

Inter-consortia policy brief

This deliverable will consist in a Policy Brief through which to draft policy advices in which members of different consortia agreed. This material will be available through the website.

Two divulgative/promotional articles in scientific magazines

This deliverable will consist in two articles published in two non-Science Citation Index scientific magazines with broad audience among SMEs and industries operating in the biotech sector (also scientific and academic community). This material will be available through the website.

Visual identity guidelines

This deliverable will consist in a series of visual elements to create distinction and a strong visual identity for the FuturEnzyme project as well as template for presentations posters and reports

FuturEnzyme website

This deliverable will consist in an open website to assure communication towards the outside world that will be maintained and regularly updated throughout the project The website will serve as the main interface for distributing project information and results as elaborated in all WPs

Newsdigest, posters, bulletins

This deliverable will consist in a series of newsdigests, posters, and bulletins for disseminating and communicating Project objectives and outcomes for SMEs and industries operating in the biotech sector (also scientific and academic community). This material will be available through the website.

FuturEnzyme project leaflet and brochure

This deliverable will consist in a series of leaflet and brochure materials for disseminating and communicating Project objectives and outcomes for consumers policymakers This material will be available through the website

Online predictive web tool to search enzymes with manufacturers' specifications

This deliverable will consist in a publicly available user-friendly and open-source online technology that, through integrating motif descriptors and big datasets, allow screening in time frames as short as seconds, full lenght chain sequences encoding enzymes that meet the key performance indicators of the detergent, textile and cosmetic manufacturing sectors. The tool will be accompanied by a report detailing the functioning of the tool and the description of motifs and descriptors on the basis of which it works.

Short promo video/comic

This deliverable will consist in at least one short promo video and a comic to maximize the FuturEnzyme dissemination, exploitation and communication impact towards a broad audience. This material will be available through the website.

Science, Consumer, Policy Briefs: research focus

This deliverable will consist in a series of Science, Consumer, Policy Briefs through which to draft individual and common scientific, market, consumer, social, and policy advices within the consortium and in collaboration with other consortia. This material will be available through the website.

Report on project results and lessons learned

This deliverable will consist in a report informing about the overall success of the new enzymes and enzymatic processes to produce environmentally-friendly consumer products and how they may help producing similar or other products with environmental benefits.

Report on one consumer survey and product testing and brief

This deliverable will consist in a report and a brief summarizing the outcomes of the consurmer surveys and product testa performed in the project to understand the acceptability of the new enzyme-based products. This material will be available through the website.

Report on public relation activities and events

This deliverable will consist in a report listing all public relation toolkits available to the consortium to support the implementation of the Dissemination and Communication Strategy, to raise awareness of the work, progress and achievements of the FuturEnzyme project (e.g. enzymes, processes, and products developed, and the high-tech enzyme development platform), and the positive societal implications of these. The report will also summarize the visits/talks in secondary school and University, dialogues and face by face talks, assistance to open days, exhibitions and tours (in science festivals, etc.), scientific seminars, conferences and workshops and other social events to which consortium partners have participated. The report on the public inter-consortia event to be organized with consortia of other funded projects will be included.

Publications

Improving bioprocess conditions for the production of prodigiosin using a marine Serratia rubidaea strain

Auteurs: Ricardo F. S. Pereira, Carla C. C. R. de Carvalho
Publié dans: Marine Drugs, Numéro 22(4), 2024, Page(s) 142, ISSN 1660-3397
Éditeur: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/md22040142

Metagenomic mining for esterases in the microbial community of Los Rueldos acid mine drainage formation

Auteurs: Paula Vidal, Mónica Martínez-Martínez, Laura Fernandez-Lopez, Sergi Roda, Celia Méndez-García, Olga V. Golyshina, Víctor Guallar, Ana I. Peláez, Manuel Ferrer
Publié dans: Frontiers in Microbiology, Numéro Volume 13, 2022, Page(s) 868839, ISSN 1664-302X
Éditeur: Frontiers Media
DOI: 10.3389/fmicb.2022.868839

An archaeal lid-containing feruloyl esterase degrades polyethylene terephthalate

Auteurs: Perez-Garcia, Pablo; Chow, Jennifer; Costanzi, Elisa; Gurschke, Marno; Dittrich, Jonas; Dierkes, Robert F.; Molitor, Rebecka; Applegate, Violetta; Feuerriegel, Golo; Tete, Prince; Danso, Dominik; Thies, Stephan; Schumacher, Julia; Pfleger, Christopher; Jaeger, Karl-Erich; Gohlke, Holger; Smits, Sander H. J.; Schmitz, Ruth A.; Streit, Wolfgang R.
Publié dans: Communications Chemistry, Numéro 6, 2023, Page(s) 193, ISSN 2399-3669
Éditeur: Nature Portfolio
DOI: 10.1038/s42004-023-00998-z

A Choice Experiment Model for Sustainable Consumer Goods: A Systematic Literature Review and Workflow Design

Auteurs: Saija, Maria Elena; Daniotti, Sara; Bosco, Diego; Re, Ilaria
Publié dans: A Choice Experiment Model for Sustainable Consumer Goods: A Systematic Literature Review and Workflow Design, Numéro 15, 2023, Page(s) 13183, ISSN 2071-1050
Éditeur: MDPI Open Access Publishing
DOI: 10.3390/su151713183

Process Development for Benzyl Alcohol Production by Whole-Cell Biocatalysis in Stirred and Packed Bed Reactors

Auteurs: Carlos Rodrigues; Carla De Carvalho
Publié dans: Microorganisms, Numéro Volume 10; Numéro 5, 2022, Page(s) 966, ISSN 2076-2607
Éditeur: MDPI
DOI: 10.3390/microorganisms10050966

A novel metagenome-derived viral RNA polymerase and its application in a cell-free expression system for metagenome screening

Auteurs: Yuchen Han, Birhanu M. Kinfu, Fabian Blombach, Gwenny Cackett, Hongli Zhang, Pablo Pérez‑García, Ines Krohn, Jesper Salomon, Volkan Besirlioglu, Tayebeh Mirzaeigarakani, Ulrich Schwaneberg, Jennifer Chow, Finn Werner, Wolfgang R. Streit
Publié dans: Scientific Reports, Numéro Volume 12, 2022, Page(s) 17882, ISSN 2045-2322
Éditeur: Nature Publishing Group
DOI: 10.1038/s41598-022-22383-x

Design and Characterization of In-One Protease-Esterase PluriZyme

Auteurs: Fernandez-Lopez, Laura; Roda, Sergi; Gonzalez-Alfonso, José L; Plou, Francisco J; Guallar, Víctor; Ferrer, Manuel
Publié dans: International Journal of Molecular Sciences, Numéro Volume 23, Numéro 21, 2022, Page(s) 13337, ISSN 1422-0067
Éditeur: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms232113337

Exploring the Potential of Various Cyclodextrin‐Based Derivatives in Enzyme Supramolecular Engineering

Auteurs: Ali Foroutan Kalourazi, Seyed Amirabbas Nazemi, Ajmal Roshan Unniram Parambil, Manuel Ferrer, S. Shirin Shahangian, Patrick Shahgaldian
Publié dans: ChemBioChem, 2024, Page(s) e202400840, ISSN 1439-4227
Éditeur: John Wiley & Sons Ltd.
DOI: 10.1002/cbic.202400840

The perennially ice-covered Lake Enigma, Antarctica supports unique microbial communities

Auteurs: Francesco Smedile, Violetta La Cono, Stefano Urbini, Giovanni Benedetti, Gina La Spada, Francesca Crisafi, Maurizio Azzaro, Nunziatina Porcino, Stefano Fazi, Stefano Amalfitano, Franco Tassi, Orlando Vaselli, Stefania Venturi, Michael T. Madigan, John E. Hallsworth, Michail M. Yakimov
Publié dans: Communications Earth & Environment, Numéro 5, 2024, Page(s) 741, ISSN 2662-4435
Éditeur: Springer Nature
DOI: 10.1038/s43247-024-01842-5

Plasmonic photothermal activation of an organosilica shielded cold-adapted lipase coimmobilised with gold nanoparticles on silica particles

Auteurs: Giunta, Carolina I; Nazemi, Seyed Amirabbas; Olesinska, Magdalena; Shahgaldian, Patrick
Publié dans: Nanoscale Advances, Numéro 5, 2023, Page(s) 81-87, ISSN 2516-0230
Éditeur: Royal Society of Chemistry
DOI: 10.1039/d2na00605g

Enhancing the Hydrolytic Activity of a Lipase towards Larger Triglycerides through Lid Domain Engineering

Auteurs: Fernandez-Lopez, Laura; Roda, Sergi; Robles-Martín, A; Muñoz-Tafalla, Rubén; Almendral, David; Ferrer, Manuel; Guallar, Víctor
Publié dans: International Journal of Molecular Sciences, Numéro 24, 2023, Page(s) 18, ISSN 1422-0067
Éditeur: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms241813768

Sub-micro- and nano-sized polyethylene terephthalate deconstruction with engineered protein nanopores

Auteurs: Robles-Martín, Ana; Amigot-Sánchez, Rafael; Fernandez-Lopez, Laura; Gonzalez-Alfonso, Jose L; Roda, Sergi; Alcolea-Rodriguez, Víctor; Heras-Márquez, Diego; Almendral, David; Coscolín, Cristina; Plou, Francisco J; Portela, Raquel; Bañares, Miguel A; Martínez-del-Pozo, Álvaro; García-Linares, Sara; Ferrer, Manuel; Guallar, Víctor
Publié dans: Nature Catalysis, Numéro 6, 2023, Page(s) 174–1185, ISSN 2520-1158
Éditeur: Nature Portfolio
DOI: 10.1038/s41929-023-01048-6

Natranaeroarchaeum sulfidigenes gen. nov., sp. nov., carbohydrate-utilizing sulfur-respiring haloarchaeon from hypersaline soda lakes, a member of a new family Natronoarchaeaceae fam. nov. in the order Halobacteriales

Auteurs: Dimitry Y. Sorokin, Michail Yakimov, Enzo Messina, Alexander Y. Merkel, Michel Koenen, Nicole J. Bale, Jaap S. Sinninghe Damsté
Publié dans: ystematic and Applied Microbiology, Numéro Volume 45, 2022, Page(s) 126356, ISSN 0723-2020
Éditeur: Elsevier BV
DOI: 10.1016/j.syapm.2022.126356

Increased Thermostability of an Engineered Flavin-Containing Monooxygenase to Remediate Trimethylamine in Fish Protein Hydrolysates

Auteurs: Goris, Marianne; Cea-Rama, Isabel; Puntervoll, Pål; Ree, Rasmus; Almendral, David; Sanz-Aparicio, Julia; Ferrer, Manuel; Bjerga, Gro Elin Kjæreng
Publié dans: Applied and Environmental Microbiology, Numéro 2, 2023, ISSN 0099-2240
Éditeur: American Society for Microbiology
DOI: 10.1128/aem.00390-23

Anaerobic carboxydotrophy in sulfur-respiring haloarchaea from hypersaline lakes

Auteurs: Dimitry Y. Sorokin, Alexander Y. Merkel, Enzo Messina, Claudia Tugui, Martin Pabst, Peter N. Golyshin & Michail M. Yakimov
Publié dans: The ISME Journal, Numéro Volume 16, 2022, Page(s) 1534–1546, ISSN 1751-7362
Éditeur: Nature Publishing Group
DOI: 10.1038/s41396-022-01206-x

Exploiting cyclodextrins as artificial chaperones to enhance enzyme protection through supramolecular engineering

Auteurs: Foroutan Kalourazi, Ali; Amirabbas Nazemi, Seyed; Unniram Parambi, Ajmal Roshan; Muñoz-Tafalla, Ruben; Vidal, Paula; Shahangian, S. Shirin; Guallar, Víctor; Ferrer, Manuel; Shahgaldian, Patrick
Publié dans: Nanoscale, Numéro 16, 2024, Page(s) 5123-5129, ISSN 2040-3372
Éditeur: The Royal Society of Chemistry
DOI: 10.1039/D3NR06044F

Isolation and Characterization of a Serratia rubidaea from a Shallow Water Hydrothermal Vent

Auteurs: Pereira, Ricardo F. S.; Ferreira, Maria J.; Oliveira, M. Conceição; Serra, Maria C.; de Carvalho, Carla C. C. R.
Publié dans: Marine Drugs, Numéro 21, 2023, Page(s) 599, ISSN 1660-3397
Éditeur: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/md21120599

Halopseudomonas species: Cultivation and molecular genetic tools

Auteurs: Kruse, Luzie; Loeschcke, Anita; de Witt, Jan; Wierckx, Nick; Jaeger, Karl-Erich; Thies, Stephan
Publié dans: Microbial Biotechnology, Numéro 17, 2024, Page(s) e14369, ISSN 1751-7915
Éditeur: Wiley
DOI: 10.1111/1751-7915.14369

Lipid- and Multivariate-Based Analyses to Determine Cell Response to pH Variations and Buffer Composition

Auteurs: Ricardo F. S. Pereira, Carla C. C. R. de Carvalho
Publié dans: Marine Biotechnology, Numéro 27, 2025, Page(s) 48, ISSN 1436-2228
Éditeur: Springer Verlag
DOI: 10.1007/s10126-025-10421-4

Calm and Frenzy: marine obligate hydrocarbonoclastic bacteria sustain ocean wellness

Auteurs: Michail M. Yakimov; Rafael Bargiela; Peter N. Golyshin
Publié dans: Current Opinion in Biotechnology, Numéro Volume 73, 2022, Page(s) 337-345, ISSN 0958-1669
Éditeur: Elsevier BV
DOI: 10.1016/j.copbio.2021.09.015

Unlocking a Key Residue in a Lipase for Efficient Polyethylene Terephthalate (PET) Hydrolysis and Influencing Depolymerization Product Profiles

Auteurs: Paula Vidal, Ana Robles‐Martín, Laura Fernandez‐Lopez, Jose L. Gonzalez‐Alfonso, David Almendral, Ruben Muñoz‐Tafalla, Francisco J. Plou, Víctor Guallar, Manuel Ferrer
Publié dans: ChemCatChem, Numéro 16, 2024, Page(s) e202400765, ISSN 1867-3880
Éditeur: Wiley - VCH Verlag GmbH & CO. KGaA
DOI: 10.1002/cctc.202400765

Crystal structure of a family VIII β-lactamase fold hydrolase reveals the molecular mechanism for its broad substrate scope

Auteurs: Isabel Cea-Rama, Cristina Coscolín, Jose L. Gonzalez-Alfonso, Jog Raj, Marko Vasiljević, Francisco J. Plou, Manuel Ferrer, Julia Sanz-Aparicio
Publié dans: FEBS Journal, Numéro Volume 289, Numéro 21, 2022, Page(s) 6714-6730, ISSN 1742-464X
Éditeur: Blackwell Publishing Inc.
DOI: 10.1111/febs.16554

Transforming an esterase into an enantioselective catecholase through bioconjugation of a versatile metal-chelating inhibitor

Auteurs: Fernandez-Lopez, Laura; Cea-Rama, Isabel; Alvarez-Malmagro, Julia; Ressmann, Anna K; Gonzalez-Alfinso, Jose Luis; Coscolín, Cristina; Shahgaldian, Patrick; Plou, Francisco J; Modregger, Jan; Pita, Marcos; Sanz-Aparicio, Julia; Ferrer, Manuel
Publié dans: Chemical Communications, Numéro 1, 2023, ISSN 1359-7345
Éditeur: Royal Society of Chemistry
DOI: 10.1039/D3CC01946B

Thermophilic carboxylesterases from hydrothermal vents of the volcanic island of Ischia active on synthetic and biobased polymers and mycotoxins

Auteurs: Distaso, Marco; Chernikova, Tatyana; Bargiela, Rafael; Coscolín, Cristina; Stogios, Peter; Gonzalez-Alfonso, Jose L; Lemak, Sofia; Khusnutdinova, Anna; Plou, Francisco J; Evdokimova, Elena; Savchenko, Alexei; Lunev, Evgenii A; Yakimov, Michail M; Golyshina, Olga; Ferrer, Manuel; Yakunin, Alexander F; Golyshin, Peter N
Publié dans: Applied and Environmental Microbiology, 2023, ISSN 0099-2240
Éditeur: American Society for Microbiology
DOI: 10.1101/2022.09.17.508236

AsiteDesign: a Semirational Algorithm for an Automated EnzymeDesign

Auteurs: Roda, Sergi; Terholsen, Henrik; Heike Meyer, Jule Ruth; Cañellas-Solé, Albert; Guallar, Víctor; Bornscheuer, Uwe; Kazemi, Masoud
Publié dans: The Journal of Physical Chemistry B, Numéro 127, 2023, Page(s) 2661−2670, ISSN 1520-6106
Éditeur: American Chemical Society
DOI: 10.1021/acs.jpcb.2c07091

The metagenome-derived esterase PET40 is highlypromiscuous and hydrolyses polyethyleneterephthalate (PET)

Auteurs: Zhang, Hongli; Dierkes, Robert F.; Perez-Garcia, Pablo; Costanzi, Elisa; Dittrich, Jonas; Cea, Pablo A.; Gurschke, Marno; Applegate, Violetta; Partus, Kristina; Schmeisser, Christel; Pfleger, Christopher; Gohlke, Holger; Smits, Sander H. J.; Jennifer Chow; Wolfgang R. Streit
Publié dans: The FEBS Journal, 2023, ISSN 1742-464X
Éditeur: Blackwell Publishing Inc.
DOI: 10.1111/febs.16924

EP-Pred: A Machine Learning Tool for Bioprospecting Promiscuous Ester Hydrolases

Auteurs: Xiang, R; Fernandez-Lopez, Laura; Robles-Martín, Ana; Ferrer, Manuel; Guallar, Víctor
Publié dans: Biomolecules, Numéro Volume 12, issue 10, 2022, Page(s) 1529, ISSN 2218-273X
Éditeur: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/biom12101529

Interplay of intracellular and trans-cellular DNA methylation in natural archaeal consortia

Auteurs: Reva, Oleg N.; La Cono, Violetta; Crisafi, Francesca; Smedile, Francesco; Mudaliyar, Manasi; Ghosal, Debnath; Giuliano, Laura; Krupovic, Mart; Yakimov, Michail M.
Publié dans: Environmental Microbiology Reports, Numéro 16, 2024, Page(s) e13258, ISSN 1758-2229
Éditeur: Wiley-Blackwell
DOI: 10.1111/1758-2229.13258

A Plurizyme with Transaminase and Hydrolase Activity Catalyzes Cascade Reactions

Auteurs: Sergi Roda, Laura Fernandez-Lopez, Marius Benedens, Alexander Bollinger, Stephan Thies, Julia Schumacher, Cristina Coscolín, Masoud Kazemi, Gerard Santiago, Christoph G. W. Gertzen, Jose L. Gonzalez-Alfonso, Francisco J. Plou, Karl-Erich Jaeger, Sander H. J. Smits, Manuel Ferrer, Víctor Guallar
Publié dans: Angewandte Chemie International Edition, Numéro Volume 61, Numéro 37, 2022, Page(s) e202207344, ISSN 1433-7851
Éditeur: John Wiley & Sons Ltd.
DOI: 10.1002/anie.202207344

Mimicking Marine Conditions to Improve Prodigiosin Yields in Bioreactor

Auteurs: Ricardo F. S. Pereira, Carla C. C. R. de Carvalho
Publié dans: Processes, Numéro 12, 2024, Page(s) 1794, ISSN 2227-9717
Éditeur: MDPI
DOI: 10.3390/pr12091794

Polyesterase activity is widespread in the family IV carboxylesterases from bacteria

Auteurs: Hairong Ma, Anna N. Khusnutdinova, Sofia Lemak, Tatyana N. Chernikova, Olga V. Golyshina, David Almendral, Manuel Ferrer, Peter N. Golyshin, Alexander F. Yakunin
Publié dans: Journal of Hazardous Materials, Numéro 481, 2024, Page(s) 136540, ISSN 0304-3894
Éditeur: Elsevier BV
DOI: 10.1016/j.jhazmat.2024.136540

Computationally guided genome rewiring of Escherichia coli and its application for nanopolyethylene terephthalate (PET) biodegradation and upcycling

Auteurs: Paula Vidal, Joan Giménez-Dejoz, Laura Fernandez-Lopez, Sonia Romero, Seyed Amirabbas Nazemi, Miguel Luengo, Jose L. Gonzalez-Alfonso, Mireia Martinez-Sugrañes, Ana Robles-Martín, David Almendral, Sergi Roda, Pablo Pérez-García, Luzie Kruse, Karl-Erich Jaeger, Wolfgang R. Streit, Francisco J. Plou, Martin Floor, Patrick Shahgaldian, Rafael Bargiela, Víctor Guallar, Manuel Ferrer
Publié dans: Trends in Biotechnology, 2025, ISSN 0167-7799
Éditeur: Elsevier BV
DOI: 10.1016/j.tibtech.2025.07.008

Cultivation of a vampire: ‘Candidatus Absconditicoccus praedator’

Auteurs: Michail M. Yakimov; Alexander Y. Merkel; Vasil A. Gaisin; Martin Pilhofer; Enzo Messina; John E. Hallsworth; Alexandra A. Klyukina; Ekaterina N. Tikhonova; Vladimir M. Gorlenko
Publié dans: Environmental Microbiology, Numéro Volume 24, Numéro 1, 2021, Page(s) 30-49, ISSN 1462-2920
Éditeur: Wiley-Blackwell
DOI: 10.1111/1462-2920.15823

Enzymes for consumer products to achieve climate neutrality

Auteurs: Molina-Espeja, Patricia; Sanz-Aparicio, Julia; Golyshin, Peter N; Robles-Martín, Ana; Guallar, Victor; Beltrametti, Fabrizio; Müller, Markus; Yakimov, Mikhail; Modregger, Jan; van Logchem, Moniec; Corvini, Philippe; Shahgaldian, Patrick; Degering, Christian; Wieland, Susanne; Timm, Anne; de Carvalho, Carla CCR; Ilaria, Re; Daniotti, Sara; Thies, Stephan; Jaeger, Karl-Erich; Chow, Jennifer; Strei
Publié dans: Oxford Open Climate Change, Numéro 3, 2023, Page(s) kgad003, ISSN 2634-4068
Éditeur: Oxford University Press
DOI: 10.1093/oxfclm/kgad003

DPANN symbiont of Haloferax volcanii accelerates xylan degradation by the non-host haloarchaeon Halorhabdus sp.

Auteurs: Oleg N. Reva, Violetta La Cono, Laura Marturano, Francesca Crisafi, Francesco Smedile, Manasi Mudaliyar, Debnath Ghosal, Elena A. Selivanova, Marina E. Ignatenko, Manuel Ferrer, Laura Fernandez-Lopez, Mart Krupovic, Michail M. Yakimov
Publié dans: iScience, Numéro 28, 2025, Page(s) 111749, ISSN 2589-0042
Éditeur: Elsevier BV
DOI: 10.1016/j.isci.2025.111749

Assessing European Consumers’ Willingness to Pay for Sustainable Laundry Detergents: A Choice Experiment Approach

Auteurs: Maria Elena Saija, Sara Daniotti
Publié dans: Sustainability, Numéro 17, 2025, Page(s) 3365, ISSN 2071-1050
Éditeur: MDPI Open Access Publishing
DOI: 10.3390/su17083365

The mobility of the cap domain is essential for the substrate promiscuity of a family IV esterase from sorghum rhizosphere microbiome

Auteurs: Distaso, Marco; Cea-Rama, Isabel; Coscolín, Cristina; Chernikova, Tatyana; Tran, Hai; Ferrer, Manuel; Sanz-Aparicio, Julia; Golyshin, Peter
Publié dans: Applied and Environmental Microbiology, 2023, ISSN 0099-2240
Éditeur: American Society for Microbiology
DOI: 10.1128/aem.01807-22

Nanohaloarchaea as beneficiaries of xylan degradation by haloarchaea

Auteurs: La Cono, Violetta; Messina, Enzo; Reva, Olga; Smedile, Francesco; La Spada, Gina; Crisafi, Francesca; Marturano, Laura; Miguez, Noa; Ferrer, Manuel; Selivanova, Elena A; Golyshina, Olga V; Golyshin, Peter N; Rohde, Manfred; Krupovic, Mart; Merkel, Alexander Y; Sorokin, Dimitry Y; Hallsworth, John E; Yakimov, Michail M
Publié dans: Microbial Biotechnology, 2023, ISSN 1751-7915
Éditeur: Wiley-Blackwell
DOI: 10.1111/1751-7915.14272

Moderately thermostable GH1 β-glucosidases from hyperacidophilic archaeon <i>Cuniculiplasma divulgatum</i> S5

Auteurs: Anna N Khusnutdinova, Hai Tran, Saloni Devlekar, Marco A Distaso, Ilya V Kublanov, Tatiana Skarina, Peter Stogios, Alexei Savchenko, Manuel Ferrer, Olga V Golyshina, Alexander F Yakunin, Peter N Golyshin
Publié dans: FEMS Microbiology Ecology, Numéro 100, 2024, Page(s) fiae114, ISSN 1574-6941
Éditeur: Oxford Academic
DOI: 10.1093/femsec/fiae114

Halapricum desulfuricans sp. nov., carbohydrate-utilizing, sulfur-respiring haloarchaea from hypersaline lakes

Auteurs: Dimitry Y. Sorokin, Michail M. Yakimov, Enzo Messina, Alexander Y. Merkel, Michel Koenen, Nicole J. Bale, Jaap S. Sinninghe D
Publié dans: Systematic and Applied Microbiology, Numéro 44, 2021, Page(s) 126249, ISSN 0723-2020
Éditeur: Elsevier BV
DOI: 10.1016/j.syapm.2021.126249

Marine Bioprospecting, Biocatalysis and Process Development

Auteurs: Rodrigues, Carlos J.C.; de Carvalho, Carla C.C.R.
Publié dans: Microorganisms, Numéro Volume 10, issue 10, 2022, Page(s) 1965, ISSN 2076-2607
Éditeur: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/microorganisms10101965

Functional diversity of nanohaloarchaea within xylan-degrading consortia

Auteurs: Oleg, Reva; Enzo, Messina; Violetta, La Cono; Francesca, Crisafi; Francesco, Smedile; Gina, La Spada; Laura, Marturano; Elena A, Selivanova; Manfred, Rohde; Mart, Krupovic; Michail M, Yakimov
Publié dans: Frontiers in Microbiology, Numéro 14, 2023, Page(s) 1182464, ISSN 1664-302X
Éditeur: Frontiers Media
DOI: 10.3389/fmicb.2023.1182464

Nanobiocatalysts with inbuilt cofactor recycling for oxidoreductase catalysis in organic solvents

Auteurs: Sahlin, Jenny; Wu, Congyu; Buscemi, Andrea; Schärer, Claude; Nazemi, Seyed Amirabbas; Rejaul, S. K.; Herrera-Reinoza, Nataly; Jung, Thomas A.; Shahgaldian, Patrick
Publié dans: Nanoscale Advances, Numéro 5, 2023, Page(s) 5036-5044, ISSN 2516-0230
Éditeur: The Royal Society of Chemistry
DOI: 10.1039/D3NA00413A

Microbial communities colonising plastics during transition from the wastewater treatment plant to marine waters

Auteurs: Constance L. Tulloch, Rafael Bargiela, Gwion B. Williams, Tatyana N. Chernikova, Benjamin M. Cotterell, Elizabeth M. H. Wellington, Joseph Christie-Oleza, David N. Thomas, Davey L. Jones, Peter N. Golyshin
Publié dans: Environmental Microbiome, Numéro 19, 2024, Page(s) 27, ISSN 2524-6372
Éditeur: Springer Science and Business Media LLC
DOI: 10.1186/s40793-024-00569-2

Enzyme adaptation to habitat thermal legacy shapes the thermal plasticity of marine microbiomes

Auteurs: Marasco, Ramona; Fusi, Marco; Coscolín, Cristina; Barozzi, Alan; Almendral, David; Bargiela, Rafael; Gohlke neé Nutschel, Christina; Pfleger, Christopher; Dittrich, Jonas; Gohlke, Holger; Matesaz, Ruth; Sanchez-Carrillo, Sergio; Mapelli, Francesca; Chernikova, Tatynana N; Golyshin, Peter N; Ferrer, Manuel; Daffonchio, Daniele
Publié dans: Nature Communications, Numéro 14, 2023, Page(s) 1045, ISSN 2041-1723
Éditeur: Nature Publishing Group
DOI: 10.1038/s41467-023-36610-0

Special Issue on “Biocatalysis, Enzyme and Process Engineering”

Auteurs: Pedro Fernandes, Carla C. C. R. de Carvalho
Publié dans: Processes, Numéro 11, 2023, Page(s) 740, ISSN 2227-9717
Éditeur: MDPI AG
DOI: 10.3390/pr11030740

Behind the Scenes of PluriZyme Designs

Auteurs: Robles-Martín, Ana; Roda, Sergi; Muñoz-Tafalla, Rubén; Guallar, Víctor
Publié dans: Eng, Numéro 5(1), 2024, Page(s) 91-103, ISSN 2673-4117
Éditeur: MDPI
DOI: 10.3390/eng5010006

Harnessing extremophilic carboxylesterases for applications in polyester depolymerisation and plastic waste recycling

Auteurs: Williams, Gwion B; Ma, Hairong; Khusnutdinova, Anna N.; Yakunin, Alexander F.; Golyshin, Peter N
Publié dans: Essays in Biochemistry, Numéro 67, 2023, Page(s) 715-729, ISSN 0071-1365
Éditeur: Portland Press, Ltd.
DOI: 10.1042/EBC20220255

Cultivating marine bacteria under laboratory conditions: Overcoming the “unculturable” dogma

Auteurs: Carlos J. C. Rodrigues, Carla C. C. R. de Carvalho
Publié dans: Frontiers in Bioengineering and Biotechnology, Numéro Volume 10, 2022, Page(s) 964589, ISSN 2296-4185
Éditeur: Frontiers Media S.A.
DOI: 10.3389/fbioe.2022.964589

Fantastic enzymes: where and how to find them

Auteurs: Ferrer, Manuel; Molina-Espeja, Patricia; Daniotti, Sara; Müller, Markus
Publié dans: The FEBS Network, 2022
Éditeur: Wiley-Blackwell Publishing Ltd
DOI: 10.5281/zenodo.7260738

Se buscan enzimas, razón: el medio ambiente

Auteurs: Manuel Ferrer, Cristina Coscolín Galán, Patricia Molina Espeja
Publié dans: The Conversation España, 2021, ISSN 2201-5639
Éditeur: The Conversation
DOI: 10.5281/zenodo.5566131

Designing protein nanopores for capturing and degrading microplastics

Auteurs: Ferrer, M., Robles‑Martín, A., García Linares, S., Martínez‑del‑Pozo, Á., & Guallar, V.
Publié dans: Springer Nature Communities, Numéro 2023, 20 octubre, 2023
Éditeur: Springer Nature

Polyethylene terephthalate (PET) primary degradation products affect c-di-GMP-, cAMP-signaling and quorum sensing (QS) in<i>Vibrio gazogenes</i>DSM 21264

Auteurs: Lena Preuss, Malik Alawi, Albert Dumnitch, Ly Trinh, Wolfgang Maison, Nils Burmeister, Anja Poehlein, Rolf Daniel, Christel Vollstedt, Wolfgang R. Streit
Publié dans: bioRxiv, 2025
Éditeur: Cold Spring Harbor Laboratory
DOI: 10.1101/2025.01.28.635239

El uso de enzimas para conseguir productos de consumo diario más sostenibles

Auteurs: Ferrer, Manuel; Molina, Patricia; Peñalver, Carolina
Publié dans: Revista Ambienta, Numéro 128 (Innovation), 2021, ISSN 2605-4787
Éditeur: Gobierno de España, Ministerio para la Transición Ecológica y el Reto Demográfico
DOI: 10.5281/zenodo.5384608

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Numéro de demande/publication: 22 383014
Date: 2022-10-21
Demandeur(s): AGENCIA ESTATAL CONSEJO SUPERIOR DE INVESTIGACIONES CIENTIFICAS

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