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CORDIS - EU research results
CORDIS

Tissue-wide identification of genome alterations in cancer

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Publications

Spatially resolved clonal copy number alterations in benign and malignant tissue. (opens in new window)

Author(s): Erickson A, He M, Berglund E, Marklund M, Mirzazadeh R, Schultz N, Kvastad L, Andersson A, Bergenstråhle L, Bergenstråhle J, Larsson L, Alonso Galicia L, Shamikh A, Basmaci E, Díaz De Ståhl T, Rajakumar T, Doultsinos D, Thrane K, Ji AL, Khavari PA, Tarish F, Tanoglidi A, Maaskola J, Colling R, Mirtti T, Hamdy FC, Woodcock DJ, Helleday T, Mills IG, Lamb AD, Lundeberg J.
Published in: Nature, Issue Aug 608 (7922), 2022, Page(s) 360-367, ISSN 0028-0836
Publisher: Nature Publishing Group
DOI: 10.1038/s41586-022-05023-2

Spatial landmark detection and tissue registration with deep learning (opens in new window)

Author(s): Markus Ekvall, Ludvig Bergenstråhle, Alma Andersson, Paulo Czarnewski, Johannes Olegård, Lukas Käll, Joakim Lundeberg
Published in: Nature Methods, 2024, ISSN 1548-7091
Publisher: Nature Publishing Group
DOI: 10.1038/s41592-024-02199-5

Expansion spatial transcriptomics (opens in new window)

Author(s): Yuhang Fan, Žaneta Andrusivová, Yunming Wu, Chew Chai, Ludvig Larsson, Mengxiao He, Liqun Luo, Joakim Lundeberg, Bo Wang
Published in: Nature Methods, 2023, ISSN 1548-7091
Publisher: Nature Publishing Group
DOI: 10.1038/s41592-023-01911-1

Spatial landscapes of cancers: insights and opportunities (opens in new window)

Author(s): Julia Chen, Ludvig Larsson, Alexander Swarbrick, Joakim Lundeberg
Published in: Nature Reviews Clinical Oncology, Issue 21, 2024, Page(s) 660-674, ISSN 1759-4774
Publisher: Nature Publishing Group
DOI: 10.1038/s41571-024-00926-7

SnapShot: Spatial transcriptomics (opens in new window)

Author(s): Ludvig Larsson 1, Ludvig Bergenstråhle 1, Mengxiao He 1, Zaneta Andrusivova 1, Joakim Lundeberg 1
Published in: Cell, Issue 185, 15, 2022, Page(s) 2840-2840
Publisher: Elsevier
DOI: 10.1016/j.cell.2022.06.002

Learning Stationary Markov Processes with Contrastive Adjustment (opens in new window)

Author(s): Bergenstråhle, Ludvig; Lagergren, Jens; Lundeberg, Joakim
Published in: arXiv, Issue 2, 2023, ISSN 2331-8422
Publisher: ArXiv.org
DOI: 10.48550/arxiv.2303.05497

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