New system-driven bioremediation of polluted habitats and environment

Informazioni relative al progetto

NYMPHE

ID dell’accordo di sovvenzione: 101060625

DOI

10.3030/101060625

Data della firma CE 5 Dicembre 2022

Data di avvio 1 Gennaio 2023

Data di completamento 31 Dicembre 2026

Finanziato da

• Food, Bioeconomy Natural Resources, Agriculture and Environment

Costo totale

€ 5 702 902,80

Contributo UE

€ 5 499 973,50

Coordinato da

ALMA MATER STUDIORUM - UNIVERSITA DI BOLOGNA
Italy

CORDIS fornisce collegamenti ai risultati finali pubblici e alle pubblicazioni dei progetti ORIZZONTE.

I link ai risultati e alle pubblicazioni dei progetti del 7° PQ, così come i link ad alcuni tipi di risultati specifici come dataset e software, sono recuperati dinamicamente da .OpenAIRE .

Risultati finali

Websites, patent fillings, videos etc. (1)

Project website

Project website online – linked to Task 5.4

Documents, reports (4)

Chemical and toxicological characterization of all matrices from contaminated sites

Report on the initial chemical and toxicological characterization of all matrices from the Nymphe contaminated sites – linked to Task 4.2

Initial dissemination and communication plan

Preparation of a detailed plan outlining main target groups, communication channels, project outcomes to be disseminated and dissemination strategies – linked to Task 5.2

Report on the sites ready for field experiments

Report on the sites ready for field experiments, including site characterization for in situ remediation, infrastructures and permits – linked to Task 4.1

Report on stakeholder analysis and mapping

Report on stakeholder analysis and mapping – linked to Task 5.1

Data Management Plan (1)

Initial Data Management Plan

The DMP will provide the identification elements and the descriptions of the data sets and will include details regarding how the research data will be handled during the project and how they will be preserved after it is completed. It will specify which methodologies and standards will be used in the data creation and management and how and when the data will be shared and made open for re-use – linked to Task 5.6

Pubblicazioni

Peer reviewed articles (16)

Computationally guided genome rewiring of Escherichia coli and its application for nanopolyethylene terephthalate (PET) biodegradation and upcycling

Autori: Vidal, Paula; Giménez-Dejoz, Joan; Fernandez-Lopez, Laura; Romero, Sonia; Nazemi, Seyed Amirabbas; Luengo, Miguel; Gonzalez-Alfonso, Jose L.; Martinez-Sugrañes, Mireia; Robles-Martín, Ana; Almendral, David; Roda, Sergi; Pérez-García, Pablo; Kruse, Luzie; Jaeger, Karl-Erich; Streit, Wolfgang R.; Plou, Francisco J.; Floor, Martin; Shahgaldian, Patrick; Bargiela, Rafael; Guallar, Víctor; Ferrer, Manuel
Pubblicato in: Trends in Biotechnology, 2025, ISSN 1879-3096
Editore: Cell Press
DOI: 10.5281/ZENODO.12568116

The Structural Permissiveness of Triosephosphate Isomerase (TpiA) of <i>Escherichia coli</i>

Autori: Belén Calles, Borja Pitarch, Víctor de Lorenzo
Pubblicato in: ChemBioChem, Numero 26, 2025, ISSN 1439-4227
Editore: Wiley
DOI: 10.1002/CBIC.202400863

Pavlovian‐Type Learning in Environmental Bacteria: Regulation of Herbicide Resistance by Arsenic in <scp> <i>Pseudomonas putida</i> </scp>

Autori: David Paez‐Espino; Gonzalo Durante‐Rodríguez; Elena Alonso Fernandes; Manuel Carmona; Victor de Lorenzo
Pubblicato in: Environmental Microbiology, 2024, ISSN 1462-2920
Editore: Wiley
DOI: 10.1111/1462-2920.70012

Polychlorinated biphenyls modify Arabidopsis root exudation pattern to accommodate degrading bacteria, showing strain and functional trait specificity

Autori: Rolli E., Ghitti E, Mapelli F., Borin S.
Pubblicato in: Frontiers in plant science, 2024, ISSN 1664-462X
Editore: Lausanne Frontiers Media
DOI: 10.3389/fpls.2024.1429096

Pressure-dependent growth controls 3D architecture of Pseudomonas putida microcolonies

Autori: Juhyun Kim, Víctor de Lorenzo, Ángel Goñi-Moreno
Pubblicato in: Environmental Microbiology Reports, 2023, ISSN 1758-2229
Editore: Wiley
DOI: 10.1111/1758-2229.13182

ChemCatChem

Autori: Paula Vidal, Ana Robles‐Martín, Laura Fernandez‐Lopez, Jose L. Gonzalez‐Alfonso, David Almendral, Ruben Muñoz‐Tafalla, Francisco J. Plou, Víctor Guallar, Manuel Ferrer
Pubblicato in: ChemCatChem, Numero 16, 2025, ISSN 1867-3880
Editore: Wiley - VCH Verlag GmbH & CO. KGaA
DOI: 10.1002/CCTC.202400765

Embedding a feruloyl esterase active site into a thermophilic endoxylanase scaffold for the degradation of feruloylated xylans

Autori: Rubén Muñoz-Tafalla; Isabel Cea-Rama; Fadia V. Cervantes; Jose L. Gonzalez-Alfonso; Francisco J. Plou; Julio Polaina; Julia Sanz-Aparicio; Manuel Ferrer; Víctor Guallar; David Talens-Perales
Pubblicato in: Computational and Structural Biotechnology Journal, 2025, ISSN 2001-0370
Editore: Elsevier
DOI: 10.1016/J.CSBJ.2025.09.003

Penitentiaries: Bringing microbiological literacy to the fringes of society

Autori: Víctor de Lorenzo
Pubblicato in: Microbial Biotechnology, 2024, ISSN 1751-7915
Editore: Wiley
DOI: 10.1111/1751-7915.70052

Analyzing microbial communities and their biodegradation of multiple pharmaceuticals in membrane bioreactors

Autori: Marcel Suleiman, Francesca Demaria, Cristina Zimmardi, Boris Alexander Kolvenbach & Philippe François-Xavier Corvini
Pubblicato in: Applied Microbiology and Biotechnology, 2023, ISSN 2191-0855
Editore: Springer Nature
DOI: 10.1007/s00253-023-12677-z

In Vivo Sampling of Intracellular Heterogeneity of Pseudomonas putida Enables Multiobjective Optimization of Genetic Devices

Autori: Hueso-Gil A, Calles B, de Lorenzo V.
Pubblicato in: ACS Synthetic Biology, 2023, ISSN 2161-5063
Editore: American Chemical Society
DOI: 10.1021/acssynbio.3c00009

Pollutant profile complexity governs wastewater removal of recalcitrant pharmaceuticals

Autori: Marcel Suleiman1, Natalie Le Lay1, Francesca Demaria1, Boris A. Kolvenbach1, Mariana S. Cretoiu2, Owen L. Petchey3, Alexandre Jousset2,4,*, Philippe F.-X. Corvin
Pubblicato in: ISME Journal, 2024, ISSN 1751-7370
Editore: Oxford University Press
DOI: 10.1093/ismejo/wrae033

Journal of Hazardous Materials

Autori: Hairong Ma, Anna N. Khusnutdinova, Sofia Lemak, Tatyana N. Chernikova, Olga V. Golyshina, David Almendral, Manuel Ferrer, Peter N. Golyshin, Alexander F. Yakunin
Pubblicato in: Journal of Hazardous Materials, Numero 481, 2025, ISSN 0304-3894
Editore: Elsevier
DOI: 10.1016/J.JHAZMAT.2024.136540

AND Logic Based on Suppressor tRNAs Enables Stringent Control of Sliding Base Editors in <i>Pseudomonas putida</i>

Autori: Elena Velázquez, Víctor de Lorenzo
Pubblicato in: ACS Synthetic Biology, Numero 13, 2024, ISSN 2161-5063
Editore: American Chemical Society (ACS)
DOI: 10.1021/ACSSYNBIO.4C00640

Carlos Asensio and the dawn of molecular microbial ecology

Autori: Víctor de Lorenzo; Fernando Baquero; Alfredo Aguilar
Pubblicato in: International Microbiology, 2024, ISSN 1618-1905
Editore: Springer
DOI: 10.1007/S10123-024-00596-6

ACS Synthetic Biology

Autori: Elena Velázquez; Víctor de Lorenzo
Pubblicato in: ACS Synthetic Biology, 2024, ISSN 2161-5063
Editore: ACS Publications
DOI: 10.1021/ACSSYNBIO.4C00640

Sub-micro- and nano-sized polyethylene terephthalate deconstruction with engineered protein nanopores

Autori: Ana Robles-Martín, Ana, Rafael Amigot-Sánchez, Laura Fernandez-Lopez, Jose L. Gonzalez-Alfonso, Sergi Roda, Víctor Alcolea-Rodriguez, Diego Heras-Márquez, David Almendral, Cristina Coscolín, Francisco J. Plou, Raquel Portela, Miguel A. Bañares, Álvaro Mar
Pubblicato in: Nature Catalysis, 2023, ISSN 2520-1158
Editore: Springer Nature
DOI: 10.1038/S41929-023-01048-6

Other (2)

The principle of uncertainty in biology: Will machine learning/artificial intelligence lead to the end of mechanistic studies?

Autori: de Lorenzo V.
Pubblicato in: PLoS biology, 2024, ISSN 1545-7885
Editore: Public Library of Science

Pseudomonas putida as a synthetic biology chassis and a metabolic engineering platform

Autori: Esteban Martínez-García, Víctor de Lorenzo
Pubblicato in: Current Opinion in Biotechnology, 2024, ISSN 0958-1669
Editore: Elsevier