Risultati dei progetti
CORDIS fornisce collegamenti ai risultati finali pubblici e alle pubblicazioni dei progetti ORIZZONTE.
I link ai risultati e alle pubblicazioni dei progetti del 7° PQ, così come i link ad alcuni tipi di risultati specifici come dataset e software, sono recuperati dinamicamente da .OpenAIRE .
Risultati finali
This deliverable presents the training plan implementation and the development of the related key output. It describes also the assessment of the training plan and lists the main results.
Report on achieved workshops (si apre in una nuova finestra)The report will describe the skills acquired by young researchers, scientists, and technical assistants from CBS and other biotech centers and institutes during the workshop 1, workshop 2 and workshop 3.
Data analysis training reports (si apre in una nuova finestra)A report on training activities and results will be held to focus on the achievement of important knowledge, skills, and abilities that are required for the efficient performance of CBS’ staff on understanding their NGS data and perform their first downstream analysis.
Data management plan (si apre in una nuova finestra)The data management plan (DMP) will describe the data expected to be generated during the course of the project, how data will be managed, described, analyzed, and stored, and the mechanisms that will be used at the end of the project to share and preserve data.
Communication and Dissemination Plan (si apre in una nuova finestra)The deliverable presents a description of the methodology that the NGS-4-ECOPROD partners shall apply for dissemination and communication activities. It is an action plan that details the respective communication and dissemination objectives and measures for achieving them.
Final report on dissemination and knowledge transfer generated within the project (si apre in una nuova finestra)This deliverable provides a summary of the different dissemination and Knowledge Transfer actions carried out along the project to make stakeholders aware of the main findings of the project and transfer the knowledge generated by its activities to the target users of this knowledge.
Technical training report (si apre in una nuova finestra)A report on training activities will be focused on the achievement of important knowledge, skills, and abilities that required for the performance of 7 CBS staff on practical handling of metagenomic, bacterial genomic, and fungal genomic using Illumina and Nanopore technologies.
Report on workshops 5, 6 and 7 (si apre in una nuova finestra)The report will describe how the workshops 5, 6 and 7 improved CBS networking, the capacity building of the CBS staff on project development and legal affairs and financial capacity building and innovation management, respectively.
Report on achieved Summer schools and workshop 4 (si apre in una nuova finestra)The first summer school program will allow participants to master the key in learning, understanding and performing the main step of the work flow of the 16S/18S/ITS rDNA: Checking required software; quality control with Fast QC; community analysis using 16S/18S/ITS reads, metagenomic assembly reads, functional annotation, taxonomic annotation, mapping reads and quantifying genes and exploriging the annotation.The second summer school program will allow participants to master the introduction to the concepts of de novo/resequencing assembly and annotation pipelines. The skill acquisition of the trained participants during the workshop will be the introduction to the concepts of de novo/resequencing assembly and annotation workflows. Particular attention will be giving to the quality control of the assembly, annotation and to the understanding how errors occur, (ii) Benchmarking several software’s/ algorithms for short and long reads correction, and (iii) Evolutionary dynamics and functional impact of the extrachromosomal elements
Gender strategy and Ethics (si apre in una nuova finestra)The gender action plan will include quotas, targets, activities, and design features to address gender-equality issues, and to facilitate women’s involvement, participation in, and tangible benefits from the project.This delivrable will describe also the actions done to ensure that all partners comply with ethical principles of research and innovation, and national legislations and regulations of the EU.
This deliverable described the construction and publishing of the project’s website (that will follow up on all the project’s activities and results) and the design and production of the related selected dissemination material.
Pubblicazioni
Autori:
Fatma Benjeddou; Ines Mnif; Marie Rossignol; Dhouha Ghribi; Slim Tounsi; Fabrice Chandre; Raida Zribi-Zghal
Pubblicato in:
Biological Control, 2025, ISSN 1049-9644
Editore:
Elsevier B.V.
DOI:
10.1016/J.BIOCONTROL.2025.105768
Autori:
Gharsalli N, Mhiri N, Yaich C and Karray F
Pubblicato in:
Front Microbiol., ISSN 1664-302X
Editore:
Frontiers
DOI:
10.3389/FMICB.2026.1843317
Autori:
Nebli S, Saadaoui O, Gargouri H, Abid C, Jardak M, Djebali F, Loukil S, Marzoug RB, Jlaiel L, Croze S, Lachuer J, Kharrat N, Mnif S.
Pubblicato in:
Front Microbiol., ISSN 1664-302X
Editore:
Frontiers
DOI:
10.3389/FMICB.2026.1841716
Autori:
Sondes Mechri; Afef Najjari; Séverine Croze; Fakher Frikha; Nadia Zarai; Hadda-Imene Ouzari; Alexandre Noiriel; Ebru Toksoy Öner; Abdelkarim Abousalham; Marilize Le Roes-Hill; Slim Tounsi; Joel Lachuer; Bassem Jaouadi
Pubblicato in:
International Journal of Molecular Sciences, 2026, ISSN 1422-0067
Editore:
Multidisciplinary Digital Publishing Institute (MDPI)
DOI:
10.3390/ijms27125389
Autori:
Sondes Mechri, Afef Najjari, Séverine Croze, Hadda-Imene Ouzari, Marilize Le Roes-Hill, Slim Tounsi, Joel Lachuer, Bassem Jaouadi
Pubblicato in:
International Journal of Molecular Sciences, Numero 27, 2026, ISSN 1422-0067
Editore:
MDPI AG
DOI:
10.3390/IJMS27114714
Autori:
Fatma Benjeddou, Ines Mnif, Marie Rossignol, Dhouha Ghribi, Slim Tounsi, Fabrice Chandre, Raida Zribi-Zghal
Pubblicato in:
Biological Control, Numero 205, 2025, ISSN 1049-9644
Editore:
ScienceDirect
DOI:
10.1016/J.BIOCONTROL.2025.105768
Autori:
Benjeddou F, Frikha F, Chouaibi I, Hoppert M, Lieségang H, Ginibre C, Chandre F, Zribi Zghal R.
Pubblicato in:
International Journal of Biological Macromolecules, ISSN 0141-8130
Editore:
ScienceDirect
DOI:
10.1016/J.IJBIOMAC.2026.152924
Autori:
Mechri S, Najjari A, Croze S, Frikha F, Zarai N, Ouzari HI, Noiriel A, Öner ET, Abousalham A, Roes-Hill ML, Tounsi S, Lachuer J, Jaouadi B.
Pubblicato in:
International Journal of Molecular Sciences, ISSN 1422-0067
Editore:
MDPI
DOI:
10.3390/IJMS27125389
Autori:
Cyrine Abid, Hela Zouari-Mechichi, Riadh Benmarzoug, Tahar Mechichi, Najla Kharrat
Pubblicato in:
Journal of Fungi, Numero 12, ISSN 2309-608X
Editore:
MDPI
DOI:
10.3390/JOF12050299
Autori:
Sondes Mechri; Afef Najjari; Fakher Frikha; Nadia Zarai; Alexandre Noiriel; Marilize Le Roes-Hill; Joel Lachuer; Slim Tounsi; Bassem Jaouadi
Pubblicato in:
International Journal of Biological Macromolecules, 2026, ISSN 0141-8130
Editore:
Elsevier B.V.
DOI:
10.3390/ijms27125389
Autori:
Sondes Mechri, Afef Najjari, Séverine Croze, Hadda-Imene Ouzari, Marilize Le Roes-Hill, Slim Tounsi, Joel Lachuer, Bassem Jaouadi
Pubblicato in:
International Journal of Molecular Sciences, ISSN 1422-0067
Editore:
MDPI
DOI:
10.3390/IJMS27114714
Autori:
Sondes Mechri; Afef Najjari; Fakher Frikha; Nadia Zarai; Alexandre Noiriel; Marilize Le Roes-Hill; Joel Lachuer; Slim Tounsi; Bassem Jaouadi
Pubblicato in:
International Journal of Biological Macromolecules, Numero 322, ISSN 0141-8130
Editore:
ScienceDirect
DOI:
10.1016/J.IJBIOMAC.2025.146696
Autori:
Cyrine Abid, Hela Zouari-Mechichi, Riadh Benmarzoug, Tahar Mechichi, Najla Kharrat
Pubblicato in:
Journal of Fungi, Numero 12, 2026, ISSN 2309-608X
Editore:
MDPI AG
DOI:
10.3390/JOF12050299
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