Imaging Brain Circuits to Decode Brain Computations: Multimodal Multiscale Imaging of Cortical Microcircuits to Model Predictive Coding in Human Vision

Monte Carlo Simulation of Diffusion MRI in geometries constructed from two-photon microscopy of cortical gray matter

Autori: Alard Roebroeck; Nima Gilani; Anna Schueth; Sven Hildebrand
Pubblicato in: Numero 2, 2019
Editore: bioRxiv
DOI: 10.1101/626945

MESMERISED: Super-accelerated 7 T STEAM imaging for quantitative multi-contrast and diffusion MRI

Autori: F.J. Fritz, B.A. Poser, A. Roebroeck
Pubblicato in: 2020
Editore: bioRxiv
DOI: 10.1101/2020.05.15.098269

Fast quantification of uncertainty in non-linear diffusion MRI models for artifact detection and more power in group studies

Autori: Robbert L. Harms; Sanne Schoenmakers; Alard J. Roebroeck; Francisco J. Fritz
Pubblicato in: Numero 1, 2019
Editore: bioRxiv
DOI: 10.1101/651547

hFRUIT: An optimized agent for optical clearing of DiI-stained adult human brain tissue

Autori: Sven Hildebrand, Anna Schueth, Klaus von Wangenheim, Christian Mattheyer, Francesco Pampaloni, Hansjürgen Bratzke, Alard F. Roebroeck, Ralf A. W. Galuske
Pubblicato in: Scientific Reports, Numero 10/1, 2020, ISSN 2045-2322
Editore: Nature Publishing Group
DOI: 10.1038/s41598-020-66999-3

Compressed Sensing Diffusion Spectrum Imaging for Accelerated Diffusion Microstructure MRI in Long-Term Population Imaging

Autori: Alexandra Tobisch, Rüdiger Stirnberg, Robbert L. Harms, Thomas Schultz, Alard Roebroeck, Monique M. B. Breteler, Tony Stöcker
Pubblicato in: Frontiers in Neuroscience, Numero 12, 2018, ISSN 1662-453X
Editore: Frontiers Research Foundation
DOI: 10.3389/fnins.2018.00650

Robust and fast nonlinear optimization of diffusion MRI microstructure models

Autori: R.L. Harms, F.J. Fritz, A. Tobisch, R. Goebel, A. Roebroeck
Pubblicato in: NeuroImage, Numero 155, 2017, Pagina/e 82-96, ISSN 1053-8119
Editore: Academic Press
DOI: 10.1016/j.neuroimage.2017.04.064

Determining Excitatory and Inhibitory Neuronal Activity from Multimodal fMRI Data Using a Generative Hemodynamic Model

Autori: Martin Havlicek, Dimo Ivanov, Alard Roebroeck, Kamil Uludağ
Pubblicato in: Frontiers in Neuroscience, Numero 11, 2017, ISSN 1662-453X
Editore: Frontiers
DOI: 10.3389/fnins.2017.00616

High resolution anatomical and quantitative MRI of the entire human occipital lobe ex vivo at 9.4 T

Autori: S. Sengupta, F.J. Fritz, R.L. Harms, S. Hildebrand, D.H.Y. Tse, B.A. Poser, R. Goebel, A. Roebroeck
Pubblicato in: NeuroImage, 2017, ISSN 1053-8119
Editore: Academic Press
DOI: 10.1016/j.neuroimage.2017.03.039

On the importance of modeling fMRI transients when estimating effective connectivity: A dynamic causal modeling study using ASL data

Autori: Martin Havlicek, Alard Roebroeck, Karl J. Friston, Anna Gardumi, Dimo Ivanov, Kamil Uludag
Pubblicato in: NeuroImage, Numero 155, 2017, Pagina/e 217-233, ISSN 1053-8119
Editore: Academic Press
DOI: 10.1016/j.neuroimage.2017.03.017

T1 relaxometry of crossing fibres in the human brain

Autori: Silvia De Santis, Yaniv Assaf, Ben Jeurissen, Derek K Jones, Alard Roebroeck
Pubblicato in: NeuroImage, Numero 141, 2016, Pagina/e 133-142, ISSN 1053-8119
Editore: Academic Press
DOI: 10.1016/j.neuroimage.2016.07.037

A Specialized Multi-Transmit Head Coil for High Resolution fMRI of the Human Visual Cortex at 7T

Autori: Shubharthi Sengupta, Alard Roebroeck, Valentin G. Kemper, Benedikt A. Poser, Jan Zimmermann, Rainer Goebel, Gregor Adriany
Pubblicato in: PLOS ONE, Numero 11/12, 2016, Pagina/e e0165418, ISSN 1932-6203
Editore: Public Library of Science
DOI: 10.1371/journal.pone.0165418

Ultra-High Field MRI Post Mortem Structural Connectivity of the Human Subthalamic Nucleus, Substantia Nigra, and Globus Pallidus

Autori: Birgit R. Plantinga, Alard Roebroeck, Valentin G. Kemper, Kâmil Uludağ, Maartje Melse, Jürgen Mai, Mark L. Kuijf, Andreas Herrler, Ali Jahanshahi, Bart M. ter Haar Romeny, Yasin Temel
Pubblicato in: Frontiers in Neuroanatomy, Numero 10, 2016, ISSN 1662-5129
Editore: Frontiers Research Foundation
DOI: 10.3389/fnana.2016.00066

Including diffusion time dependence in the extra-axonal space improves in vivo estimates of axonal diameter and density in human white matter

Autori: Silvia De Santis, Derek K. Jones, Alard Roebroeck
Pubblicato in: NeuroImage, Numero 130, 2016, Pagina/e 91-103, ISSN 1053-8119
Editore: Academic Press
DOI: 10.1016/j.neuroimage.2016.01.047

Automatic Segmentation of Human Cortical Layer-Complexes and Architectural Areas Using Ex vivo Diffusion MRI and Its Validation

Autori: Matteo Bastiani, Ana-Maria Oros-Peusquens, Arne Seehaus, Daniel Brenner, Klaus Möllenhoff, Avdo Celik, Jörg Felder, Hansjürgen Bratzke, Nadim J. Shah, Ralf Galuske, Rainer Goebel, Alard Roebroeck
Pubblicato in: Frontiers in Neuroscience, Numero 10, 2016, ISSN 1662-453X
Editore: Frontiers Research Foundation
DOI: 10.3389/fnins.2016.00487

Robust and Fast Markov Chain Monte Carlo Sampling of Diffusion MRI Microstructure Models

Autori: Robbert L. Harms, Alard Roebroeck
Pubblicato in: Frontiers in Neuroinformatics, Numero 12, 2018, ISSN 1662-5196
Editore: Frontiers Research Foundation
DOI: 10.3389/fninf.2018.00097

Ultra-high resolution and multi-shell diffusion MRI of intact ex vivo human brains using kT-dSTEAM at 9.4T

Autori: F.J. Fritz, S. Sengupta, R.L. Harms, D.H. Tse, B.A. Poser, A. Roebroeck
Pubblicato in: NeuroImage, Numero 202, 2019, Pagina/e 116087, ISSN 1053-8119
Editore: Academic Press
DOI: 10.1016/j.neuroimage.2019.116087

Ex vivo diffusion MRI of the human brain: Technical challenges and recent advances

Autori: Alard Roebroeck, Karla L. Miller, Manisha Aggarwal
Pubblicato in: NMR in Biomedicine, Numero 32/4, 2018, Pagina/e e3941, ISSN 0952-3480
Editore: John Wiley & Sons Inc.
DOI: 10.1002/nbm.3941

Curvilinear locus coeruleus functional connectivity trajectories over the adult lifespan: a 7T MRI study

Autori: Heidi I.L. Jacobs, Lisa Müller-Ehrenberg, Nikos Priovoulos, Alard Roebroeck
Pubblicato in: Neurobiology of Aging, Numero 69, 2018, Pagina/e 167-176, ISSN 0197-4580
Editore: Elsevier BV
DOI: 10.1016/j.neurobiolaging.2018.05.021

Scalable cytoarchitectonic characterization of large intact human neocortex samples

Autori: Roebroeck, Alard; Galuske, Ralf; Herrler, Andreas; Schueth, Anna; Hildebrand, Sven
Pubblicato in: Nature Scientific Reports, Numero 1, 2018, ISSN 2045-2322
Editore: Nature Publishing Group
DOI: 10.1101/274985

The mesoSPIM initiative: open-source light-sheet mesoscopes for imaging in cleared tissue

Autori: Fabian F. Voigt, Daniel Kirschenbaum, Evgenia Platonova, Stéphane Pagès, Robert A. A. Campbell, Rahel Kästli, Martina Schaettin, Ladan Egolf, Alexander van der Bourg, Philipp Bethge, Karen Haenraets, Noémie Frézel, Thomas Topilko, Paola Perin, Daniel Hillier, Sven Hildebrand, Anna Schueth, Alard Roebroeck, Botond Roska, Esther Stoeckli, Roberto Pizzala, Nicolas Renier, Hanns Ulrich Zeilhofer,
Pubblicato in: Nature Methods, 2020, ISSN 1548-7091
Editore: Nature Publishing Group
DOI: 10.1101/577122

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