Rezultaty
The increased depth of sequences and improved algorithms have seen an increase in the number of marine metagenomics datasets that can be assembled. However, no metrics are in place to indicate what constitutes a good assembly. Furthermore, the community is producing more and more MAGs from these assemblies. Papers by Parks et al and Bowers et al have provided a range on different ways of assessing the quality of a MAG, with the former also beginning to outline a set of standards that should be adopted. We will assess these standards against MAGs produced from Marine samples (from both our own and publicly deposited MAGs). We will report on the criteria that we believe should be achieved from inclusion in Marine data resources, such as EBI metagenomics or the MAR databases. (Rob Finn, EBI and Nils Peder Willassen, UiT). EMBL-EBI, NO, FR
D2.3 A report on the features and nature of novel data which are needed within online benchmarking experiments in different subareasA report on the features and nature of novel data which are needed within online benchmarking experiments in different subareas (Task 2.3, task 2.4).
D9.3 Report on implementation of value-added user applications and cohort integrationReport on implementation of value-added user applications and cohort integration
D6.2 Report on comprehensive metagenomic data standards environmentReport on comprehensive metagenomic data standards environment (Task 6.1)
D10.5 A Node report on regional priorities and channels to use. Available to all relevant partners in the Node network in that countryA Node report on regional priorities and channels to use. Available to all relevant partners in the Node network in that country
D12.4 Updated long- term strategy for the sustainability of data managementUpdated long- term strategy for the sustainability of data management
D6.1 Specific marine databases made publicly availableSpecific marine databases made publicly available (Task 6.2)
D2.2 A report on the coordination with WP1 on the incorporation of monitoring statistics and benchmarking results in registry releasesA report on the coordination with WP1 on the incorporation of monitoring statistics and benchmarking results in registry releases (Task 2.4).
D11.3 Report on training provided across the ELIXIR communityReport on training provided across the ELIXIR community (Task 11.2).
D1.5 Incorporation of monitoring statistics and benchmarking results in registry releasesIncorporation of monitoring statistics and benchmarking results in registry releases (Task 1.2)
D4.1 ELIXIR Technical Services RoadmapELIXIR Technical Services Roadmap: Incorporates the technical requirements coming from the Use Cases, details of the service offerings coming from the ELIXIR Nodes and the public e-Infrastructures, and provides a roadmap detailing when new services will appear within the ELIXIR Technical Services registry and the work being undertaken by the service providers to meet ELIXIR’s requirements (Task 4.1, task 4.2, task 4.3).
D4.4 ELIXIR Technical Services documentELIXIR Technical Services document: Describes the ELIXIR Technical Services being offered through the cooperating service providers (ELIXIR Nodes and public e-infrastructures) (Task 4.1, task 4.2, task 4.3).
D8.6 Documentation on adequate quality reporting standards for genomics datasetsDocumentation on adequate quality reporting standards for genomics datasets
D1.1 Registry release with comprehensive coverage of ELIXIR Node resources, including resource data format curation and analysisRegistry release with comprehensive coverage of ELIXIR Node resources, including resource data format curation and analysis (Task 1.1) - year 1
D8.7 Options for sustainability of RD-Connect within the scope of ELIXIROptions for sustainability of RD-Connect within the scope of ELIXIR
D8.3 Report on the ELIXIR workshop organized with the rare-disease communitiesReport on the ELIXIR workshop organized with the rare-disease communities - year 1 (Task 8.3).
D9.4 Report on implementation of cloud access and secure user and data managementReport on implementation of cloud access and secure user and data management
D9.1 Requirements analysis documentRequirements analysis document
D13.2 Report on ELIXIR’s Communication StrategyReport on ELIXIR’s Communication Strategy (Task 13.1).
D11.2 Report on the training needs identified across the ELIXIR communityReport on the training needs identified across the ELIXIR community (Task 11.1).
D6.3 Report describing a set of tools, pipelines and search engine for interrogation of marine metagenomic dataReport describing a set of tools, pipelines and search engine for interrogation of marine metagenomic data (Task 6.3 and task 6.4)
D5.1 Interoperability Implementation RegulationsInteroperability Implementation Regulations. A set of standards, rules, controlled vocabularies, authorised unique identifiers and interoperable service APIs for the data repositories and biological knowledge bases agreed and implemented in the field with WP6 to 9, and WP3; resources registered in BioSharing; BioCatalogue and BioRegistry (WP1); ontologies accessible via Ontology Lookup Services (Task 5.1)
D10.3 ELIXIR Advanced workshops on genome annotationELIXIR Advanced workshops on genome annotation - Month 4 (Task 10.3).
D3.2 A report describing the semantically enriched Europe PMC that links literature to ELIXIR Core resource data, exemplified by GeneRif annotationsA report describing the semantically enriched Europe PMC that links literature to ELIXIR Core resource data, exemplified by GeneRif annotations (Task 3.3)
D7.3 Implementation of BRAPI (Plant Breeding API) at all participating nodesImplementation of BRAPI (Plant Breeding API) at all participating nodes
D4.2 Updated ELIXIR Technical Services RoadmapUpdated ELIXIR Technical Services Roadmap: Incorporates the technical requirements coming from the Use Cases, details of the service offerings coming from the ELIXIR Nodes and the public e-Infrastructures, and provides a roadmap detailing when new services will appear within the ELIXIR Technical Services portfolio and the work being undertaken by the service providers to meet ELIXIR’s requirements (Task 4.1, task 4.2, task 4.3).
D1.8 Matchmaking Service: implementation & evaluation of impactMatchmaking Service: implementation & evaluation of impact
D1.3 Registry release with comprehensive coverage of ELIXIR Node resources, including resource data format curation and analysisRegistry release with comprehensive coverage of ELIXIR Node resources including resource data format curation and analysis Task 11 year 3
D10.4 ELIXIR Advanced workshops on genome annotationELIXIR Advanced workshops on genome annotation - Month 22 (Task 10.3).
D13.4 Report on the impact of the Innovation and SME programme on industry usersReport on the impact of the Innovation and SME programme on industry users (Task 13.2).
D5.3 Bring Your Own DataBring Your Own Data 8 delivered workshops and established roll-out programme across WP10 Data Node capability network; materials deposited on WP11 TeSS (Task 5.3)
"D10.1 Communities of"" Good Practice"" and Protocols of Transfer"Communities of Good Practice and Protocols of Transfer Task 101
D2.4 Final report on the impact of ELIXIR infrastructure for hosting scientific benchmarking and technical monitoring resultsFinal report on the impact of ELIXIR infrastructure for hosting scientific benchmarking and technical monitoring results
D1.6 Workbench integration enabler: implementation & evaluation of impactWorkbench integration enabler: implementation & evaluation of impact (Task 1.3)
D9.2 Report on implementation of submissions interface and APIReport on implementation of submissions interface and API (Task 9.1).
D1.7 Description of the registry user helpdesk & impact on user support via community forumsDescription of the registry user helpdesk & impact on user support via community forums
D6.5 Improvement and Application of Eukaryotic GeneWe will release the first set of the reference eukaryotic gene catalog including 292 species of the MMETSP project and 78 species of Roscoff Culture Collection. Thereafter, we will investigate the production of combined assemblies (assemblies built from a unique taxa, but under a range of RNAseq conditions) from MMETSP dataset. We plan to produce 119 new eukaryotic assemblies. Additionally, works we will identify (probable) contamination and/or mixed species populations within eukaryotic assemblies, based on functional annotation (produced by EBI pipeline) and contigs binning. (Rob Finn, EBI and Nils Peder Willassen, UiT). EMBL-EBI, FR
D13.1 Release of a live ELIXIR Communication Strategy, including annual updates thereafterRelease of a live ELIXIR Communication Strategy, including annual updates thereafter - Month 6 (Task 13.1).
D13.3 Report on ELIXIR’s International StrategyReport on ELIXIR’s International Strategy (Task 13.4).
D3.3 Report describing ELIXIR-wide systems for the computer-assisted collection and delivery of harmonised metrics and quality criteria from multiple ELIXIR resources and collation of these at the ELIXIR HubReport describing ELIXIR-wide systems for the computer-assisted collection and delivery of harmonised metrics and quality criteria from multiple ELIXIR resources and collation of these at the ELIXIR Hub (Task 3.2).
D8.1 Portfolio of ELIXIR data resources and tools for the rare diseases communitiesPortfolio of ELIXIR data resources and tools for the rare diseases communities (Task 8.1).
D11.1 Deliver the identified evaluation systems and good practice guidelines for training. Deliver a TeSS platform and identify e-learning solutionsDeliver the identified evaluation systems and good practice guidelines for training. Deliver a TeSS platform and identify e-learning solutions (Task 11.1)
D12.2 ELIXIR Handbook of OperationsELIXIR Handbook of Operations (Task 12.1).
D3.1 List of metrics/quality criteria measuring the scientific impact, service usage, service delivery, and eligibility for “ELIXIR Named Resource” and “ELIXIR Core Resource” labels, to allow construction and extension of the ELIXIR Resource portfolioList of metrics/quality criteria measuring the scientific impact, service usage, service delivery, and eligibility for “ELIXIR Named Resource” and “ELIXIR Core Resource” labels, to allow construction and extension of the ELIXIR Resource portfolio (Task 3.1).
D7.1 Datasets annotated for at least 1 woody plant, cereal and solanaceous species; genotype, phenotype and sample meta data submitted to appropriate public archivesDatasets annotated for at least 1 woody plant, cereal and solanaceous species; genotype, phenotype and sample meta data submitted to appropriate public archives (Task 7.1, task 7.2 and task 7.3).
D1.2 Registry release with comprehensive coverage of ELIXIR Node resources, including resource data format curation and analysisRegistry release with comprehensive coverage of ELIXIR Node resources, including resource data format curation and analysis (Task 1.1) - year 2
D4.3 ELIXIR Technical Services RoadmapELIXIR Technical Services Roadmap: Incorporates the technical requirements coming from the Use Cases, details of the service offerings coming from the ELIXIR Nodes and the public e-Infrastructures, and provides a roadmap detailing when new services will appear within the ELIXIR Technical Services portfolio and the work being undertaken by the service providers to meet ELIXIR’s requirements (Task 4.1, task 4.2, task 4.3).
D10.2 Blueprint on how to set up an ELIXIR data NodeBlueprint on how to set up an ELIXIR data Node (Task 10.2).
D7.2 Phenotypic data exposed through integrating API by all participantsPhenotypic data exposed through integrating API by all participants (Task 7.4).
D8.5 Report on the ELIXIR workshops organised with the rare-disease communitiesReport on the ELIXIR workshops organised with the rare-disease communities
D8.2 Documentation of the tools for the data manipulation and standard conversions in the rare-disease fieldDocumentation of the tools for the data manipulation and standard conversions in the rare-disease field (Task 8.2).
D2.1 Creation of a database warehouse infrastructure for storing and organizing data for online performance assessment experimentsCreation of a database warehouse infrastructure for storing and organizing data for online performance assessment experiments (Tasks 2.2, 2.3, 2.4)
D9.5 Report on implementation of ELSI and policy consideration for controlled access dataReport on implementation of ELSI and policy consideration for controlled access data
D8.4 Report on the ELIXIR workshop organized with the rare-disease communitiesReport on the ELIXIR workshop organized with the rare-disease communities - year 2 (Task 8.3).
D1.4 Registry release with comprehensive coverage of ELIXIR Node resources, including resource data format curation and analysisRegistry release with comprehensive coverage of ELIXIR Node resources, including resource data format curation and analysis (Task 1.1) - year 4
Publikacje
Autorzy:
Guy Cochrane; Rob Finn; Nils Peder Willassen; Lars Ailo Bongo; Monica Santamaria; Bruno Fosso; Eric Pelletier; Erwan Corre; Alex Mitchell; Simon Potter
Opublikowane w:
2018
Wydawca:
Zenodo
DOI:
10.5281/zenodo.1229221
Autorzy:
Stockinger, Heinz; Barlow, Mary; Cook, Chuck; Drysdale, Rachel; Gasteiger, Elisabeth; Kim, Jee-Hyub; Lopez, Rodrigo; Redaschi, Nicole; Teixeira, Daniel; Durinx, Christine; McEntyre, Johanna
Opublikowane w:
2018
Wydawca:
Zenodo
DOI:
10.5281/zenodo.1194123
Autorzy:
Hermjakob, Henning; Mcmurry, Julie; Beard, Niall; Clark, Tim; Janée, Greg; Jimenez, Rafael; Grethe, Jeffrey; Wimalaratne, Sarala; Kunze, John; Juty, Nick
Opublikowane w:
Numer 1, 2018
Wydawca:
BioRxiv
DOI:
10.1101/101279
Autorzy:
Adam-Blondon, Anne-Françoise; Chaves, Inês; Coppens, Frederik; Finkers, Richard; Horro, Carlos; Kersey, Paul; Michotey, Celia; Miguel, Célia; Papoutsoglu, Evangelia; Pommier, Cyril; Ramsak, Ziva
Opublikowane w:
2017
Wydawca:
Zenodo
DOI:
10.5281/zenodo.1111825
Autorzy:
Buchhalter, Ivo; Whalley, Justin; Hutter, Barbara; Livitz, Dimitri; Perry, Marc; Rosenberg, Mara; Saksena, Gordon; Trotta, Jean-Rémi; Raine, Keiran; Eils, Roland; Korbel, Jan; Rheinbay, Esther; Network, Pcawg; , Pcawg-Qc; Kleinheinz, Kortine; Gerhard, Daniela; Campbell, Peter; Getz, Gad; Schlesner, Matthias; Werner, Johannes; Beltran, Sergi; Gut, Marta; Huebschmann, Daniel; Gut, Ivo; Stobbe, Mira
Opublikowane w:
2017
Wydawca:
BioRxiv
DOI:
10.1101/140921
Autorzy:
Hidalgo, Marta; Dopazo, Joaquín; Vert, Jean-Philippe; Carbonell-Caballero, Jose; Amadoz, Alicia; Cubuk, Cankut; Jiao, Yunlong
Opublikowane w:
2017
Wydawca:
BioRxiv
DOI:
10.1101/132357
Autorzy:
Niklas Blomberg; Martin Cook; Pablo Roman Garcia; Stephanie Suhr; Premysl Velek; Montserrat Gonzalez; Susanna Repo
Opublikowane w:
2018
Wydawca:
Zenodo
DOI:
10.5281/zenodo.1289765
Autorzy:
Carole Goble, Stian Soiland-Reyes, Sean Bechhofe
Opublikowane w:
2018
Wydawca:
Zenodo
DOI:
10.5281/zenodo.1313066
Autorzy:
Christopher John Atherton; Thomas Barton; Jim Basney; Daan Broeder; Alessandro Costa; Mirjam van Daalen; Stephanie Dyke; Willem Elbers; Carl-Fredrik Enell; Enrico Maria Vincenzo Fasanelli; João Fernandes; Licia Florio; Peter Gietz; David L. Groep; Matthias Bernhard Junker; Christos Kanellopoulos; David Kelsey; Philip Kershaw; Cristina Knapic; Thorsten Kollegger
Opublikowane w:
2018
Wydawca:
Zenodo
DOI:
10.5281/zenodo.1307551
Autorzy:
Beltran, Sergi; Coward, Eivind; Matalonga, Leslie; Drablos, Finn; Peterson, Hedi; Gut, Ivo; Roos, Marco
Opublikowane w:
2018
Wydawca:
Zenodo
DOI:
10.5281/zenodo.1321650
Autorzy:
Adam-Blondon, Anne-Françoise; Chaves, Inês; Coppens, Friederik; Costa, Bruno; Finkers, Richard; Horro, Carlos; Kersey, Paul; Mihotey, Celia; Miguel, Celia; Papoutsoglu, Evangelia; Pommier, Cyril; Ramsak, Ziva
Opublikowane w:
2018
Wydawca:
Zenodo
DOI:
10.5281/zenodo.1321902
Autorzy:
elek, Premysl; Wiles, Kayla; Smith, Andrew; Garcia Roman, Pablo; Cook, Martin; Cernoskova, Dana
Opublikowane w:
2018
Wydawca:
Zenodo
DOI:
10.5281/zenodo.1321214
Autorzy:
Lantz, Henrik; Leskosek, Brane
Opublikowane w:
2018
Wydawca:
Zenodo
DOI:
10.5281/zenodo.1321915
Autorzy:
Ison, Jon; Brunak, Søren; Tools platform community
Opublikowane w:
2018
Wydawca:
Zenodo
DOI:
10.5281/zenodo.1321740
Autorzy:
Premysl Velek; Andrew Smith
Opublikowane w:
2017
Wydawca:
Zenodo
DOI:
10.5281/zenodo.557084
Autorzy:
Leskosek, Brane; Matalonga, Leslie; Kastrin, Andrej; Dimec, Jure; Femke Francissen; Beltran, Sergi; Coward, Eivind; Peterson, Hedi; Gut, Ivo; Roos, Marco; Varma, Susheel
Opublikowane w:
2018
Wydawca:
Zenodo
DOI:
10.5281/zenodo.1321601
Autorzy:
Nyrönen, Tommi; Matyska, Ludek; Newhouse, Steven; Compute platform community
Opublikowane w:
2018
Wydawca:
Zenodo
DOI:
10.5281/zenodo.1321699
Autorzy:
Jacobsen, Annika; Thompson, Mark; Hanauer, Marc; Sergi, Beltran; Gray, Alasdair; Juty, Nick; Ehrhart, Friederike; Evelo, Chris
Opublikowane w:
2018
Wydawca:
Zenodo
DOI:
10.5281/zenodo.1452468
Autorzy:
McEntyre, Jo; Venkatesan, Aravind; Gobeill Julien; Piovesan, Damiano; Tosatto, Silvio; Ruch, Patrick
Opublikowane w:
2018
Wydawca:
Zenodo
DOI:
10.5281/zenodo.1452442
Autorzy:
de la Torre, Sabela; Moldes, Mauricio; Rambla, Jordi
Opublikowane w:
2018
Wydawca:
Zenodo
DOI:
10.5281/zenodo.1452480
Autorzy:
Ison, Jon; Ienasescu, Hans; Kalas, Matus; ELIXIR Tools community
Opublikowane w:
2018
Wydawca:
Zenodo
DOI:
10.5281/zenodo.1452910
Autorzy:
Rustici, Gabriella; Gurwitz, Kim; Louisa, Bellis; ELIXIR Training community
Opublikowane w:
2018
Wydawca:
Zenodo
DOI:
10.5281/zenodo.1453021
Autorzy:
Goble, Carol; Evelo, Chris; Parkinson, Helen; ELIXIR Interoperability community
Opublikowane w:
2018
Wydawca:
Zenodo
DOI:
10.5281/zenodo.1452415
Autorzy:
de la Torre, Sabela; Lloret-Villas, Audald; Rambla, Jordi
Opublikowane w:
2018
Wydawca:
Zenodo
DOI:
10.5281/zenodo.1452472
Autorzy:
Capella-Gutierrez, Salvador; Haas, Juergen; Ll. Gelpí, Josep; Mª. Fernández, Jose; Garrayo, Javier
Opublikowane w:
2018
Wydawca:
Zenodo
DOI:
10.5281/zenodo.1452425
Autorzy:
Gelpi Ll., Josep; Mª. Fernández, Jose; Sundesha, Vicky; Repchevsky; Haas, Juergen
Opublikowane w:
2018
Wydawca:
Zenodo
DOI:
10.5281/zenodo.1452561
Autorzy:
Miguel, Célia; Pommier, Cyril; Finkers, Richard; Coppens, Frederik; Bolser, Dan
Opublikowane w:
2018
Wydawca:
Zenodo
DOI:
10.5281/zenodo.1452452
Autorzy:
Spalding, Dylan; Rambla, Jordi; Törnroos, Juha; Leinonen, Jaakko; Linden, Mikael; Human data community
Opublikowane w:
2018
Wydawca:
Zenodo
DOI:
10.5281/zenodo.1452470
Autorzy:
Ison, Jon; Ienasescu, Hans; Chmura, Piotr; Menager, Herve; ELIXIR Tools community
Opublikowane w:
2018
Wydawca:
Zenodo
DOI:
10.5281/zenodo.1456754
Autorzy:
Newhouse, Steven; Nyrönen, Tommi; Matyska, Ludek; ELIXIR Compute platform community
Opublikowane w:
2018
Wydawca:
Zenodo
DOI:
10.5281/zenodo.1457169
Autorzy:
Palmblad, Magnus, Lamprecht, Anna-Lena; Schwämmle, Veit; Ison, Jon
Opublikowane w:
Zenodo, 2018
Wydawca:
Zenodo
DOI:
10.5281/zenodo.1456766
Autorzy:
Spalding, Dylan; Parkinson, Helen; Rambla, Jordi; Lappalainen, Ilkka; Tornroos, Juha; Senf, Alexander; Keane, Thomas
Opublikowane w:
2018
Wydawca:
Zenodo
DOI:
10.5281/zenodo.1452474
Autorzy:
ELIXIR Compute platform
Opublikowane w:
2016
Wydawca:
ZENODO
DOI:
10.5281/zenodo.148302
Autorzy:
Trotta, Jean-Rémi; Laurie, Steve; Matalonga, Leslie; Gut, Marta; Beltran, Sergi; Gut, Ivo G.
Opublikowane w:
2018
Wydawca:
Zenodo
DOI:
10.5281/zenodo.3209549
Autorzy:
Carole Goble; Sarah Cohen-Boulakia; Daniel Schober; Kristian Peters; Stian Soiland-Reyes; Daniel Garijo; Yolanda Gil; Michael R. Crusoe
Opublikowane w:
2019
Wydawca:
Zenodo
DOI:
10.5281/zenodo.2642530
Autorzy:
Pelletier, Eric; Corre, Erwan; Niang, Guita; Meng, Arnaud; Hoebeke, Mark; Finn, Robert
Opublikowane w:
2019
Wydawca:
Zenodo
DOI:
10.5281/zenodo.3234522
Autorzy:
Hooft, Rob; Goble, Carole; Evelo, Chris; Roos, Marco; Sansone, Susanna; Ehrhart, Friederike; Kuzak, Mateusz; Carta, Claudio; Parkinson, Helen; Jansen, Mascha; Mons, Barend
Opublikowane w:
2019
Wydawca:
Zenodo
DOI:
10.5281/zenodo.3207809
Autorzy:
Leskosek, Brane; Matalonga, Leslie; Beltran, Sergi; Roos, Marco
Opublikowane w:
2019
Wydawca:
Zenodo
DOI:
10.5281/zenodo.3234533
Autorzy:
Mitchell, Alex; Scheremetjew, Maxim; De Moro, Gianluca; Fosso, Bruno; Santamaria, Monica; Pesole, Graziano; Raj, Shriya; Bongo, Lars Ailo; Willassen, Nils Peder; Finn, Robert D.
Opublikowane w:
2019
Wydawca:
Zenodo
DOI:
10.5281/zenodo.3228302
Autorzy:
Finn, Robert; Mitchell, Alex; Cochrane, Guy; Burgin, Josephine; Willassen, Nils Peder
Opublikowane w:
2019
Wydawca:
Zenodo
DOI:
10.5281/zenodo.3234520
Autorzy:
Gut, Ivo G.; Beltran, Sergi; Roos, Marco; Blomberg, Niklas; Scollen, Serena; Matalonga, Leslie; Saunders, Gary
Opublikowane w:
2019
Wydawca:
Zenodo
DOI:
10.5281/zenodo.3228294
Autorzy:
Lauer, Katharina; Smith, Andrew
Opublikowane w:
Numer 1, 2019
Wydawca:
Zenodo
DOI:
10.5281/zenodo.3357734
Autorzy:
Durinx, Christine; Drysdale, Rachel; McEntyre, Jo; Stockinger, Heinz; Haas, Juergen; Redaschi, Nicole; Venkatesan, Aravind; Gruhl, Franziska; Cook, Chuck
Opublikowane w:
Numer 3, 2019
Wydawca:
Zenodo
DOI:
10.5281/zenodo.3362082
Autorzy:
Lantz, Henrik; Persson, Bengt; Vondrášek, Jirí; Leskošek, Brane
Opublikowane w:
Numer 3, 2019
Wydawca:
Zenodo
DOI:
10.5281/zenodo.3354328
Autorzy:
Capella-Gutierrez, Salvador; Haas, Juergen; Gelpí, Josep Ll.; Fernández, José Maria
Opublikowane w:
Numer 1, 2019
Wydawca:
Zenodo
DOI:
10.5281/zenodo.3362116
Autorzy:
Miguel, Célia; Pommier, Cyril; Finkers, Richard; Coppens, Frederik; Bolser, Dan; Ruiz, Manuel; Adam-Blondon, Anne-Françoise; Gruden, Kristina; Ramšak, Živa; Papoutsoglou, Evangelia; Faria, Daniel; Costa, Bruno; Chaves, Inês
Opublikowane w:
Numer 1, 2019
Wydawca:
Zenodo
DOI:
10.5281/zenodo.3354265
Autorzy:
Martin, Corrine; Smith, Andrew; Blomberg, Niklas; Velek, Premysl; Balzano, Melissa; Berman, Maia; Cook, Martin; Coppens, Frederik; Drysdale, Rachel; Durinx, Christine; Hancock, John; Harrow, Jennifer; Lanfear, Jerry; Lauer, Katharina; Palagi, Patricia; Pommier, Cyril; Repo, Susanna; Sansone, Susanna; Sarntivijai, Sirarat; Saunders, Gary; Tedds, Jonathan; van Gelder, Celia
Opublikowane w:
Numer 3, 2019
Wydawca:
Zenodo
DOI:
10.5281/zenodo.3384778
Autorzy:
Blanchet, Christophe; Borg, Mikael; Chien, Jinny; Codo, Laia; Gelpi, Jose Ll.; GonzaLEZ, Montserrat; Laitinen, Jarno; Lappalainen, Ilkka; Linden, Mikael; Matyska, Ludek; Newhouse, Steven; Nyrönen, Tommi; Prochazka, Michael; Ruda, Mirek; Salminen, Harri; Staiger, Christine; Tedds, Jonathan; Törnroos, Juha; Varma, Susheel; Wildish, Tony
Opublikowane w:
Numer 1, 2019
Wydawca:
Zenodo
DOI:
10.5281/zenodo.3381598
Autorzy:
Persson, Bengt; Jareborg, Niclas
Opublikowane w:
Numer 3, 2019
Wydawca:
Zenodo
DOI:
10.5281/zenodo.3381599
Autorzy:
DOMINGUEZ DEL ANGEL Victoria; SAND Olivier; MEDIGUE Claudine; VAN HELDEN Jacques
Opublikowane w:
Numer 2, 2019
Wydawca:
Zenodo
DOI:
10.5281/zenodo.3520131
Autorzy:
Segura, Joan; Sanchez-Garcia, Ruben; Martinez, Marta; Cuenca-Alba, Jesus; Tabas-Madrid, Daniel; Sorzano, C.O.S; Carazo, JM
Opublikowane w:
2017
Wydawca:
Zenodo
DOI:
10.5281/zenodo.1038018
Autorzy:
Pedro G. Ferreira, Manuel Muñoz-Aguirre, Ferran Reverter, Caio P. Sá Godinho, Abel Sousa, Alicia Amadoz, Reza Sodaei, Marta R. Hidalgo, Dmitri Pervouchine, Jose Carbonell-Caballero, Ramil Nurtdinov, Alessandra Breschi, Raziel Amador, Patrícia Oliveira, Cankut Çubuk, João Curado, François Aguet, Carla Oliveira, Joaquin Dopazo, Michael Sammeth, Kristin G. Ardlie, Roderic Guigó
Opublikowane w:
Nature Communications, Numer 9/1, 2018, ISSN 2041-1723
Wydawca:
Nature Publishing Group
DOI:
10.1038/s41467-017-02772-x
Autorzy:
Michiel Van Bel, Tim Diels, Emmelien Vancaester, Lukasz Kreft, Alexander Botzki, Yves Van de Peer, Frederik Coppens, Klaas Vandepoele
Opublikowane w:
Nucleic Acids Research, Numer 46/D1, 2017, Strona(/y) D1190-D1196, ISSN 0305-1048
Wydawca:
Oxford University Press
DOI:
10.1093/nar/gkx1002
Autorzy:
Victoria Dominguez Del Angel, Erik Hjerde, Lieven Sterck, Salvadors Capella-Gutierrez, Cederic Notredame, Olga Vinnere Pettersson, Joelle Amselem, Laurent Bouri, Stephanie Bocs, Christophe Klopp, Jean-Francois Gibrat, Anna Vlasova, Brane L. Leskosek, Lucile Soler, Mahesh Binzer-Panchal, Henrik Lantz
Opublikowane w:
F1000Research, Numer 7, 2018, Strona(/y) 148, ISSN 2046-1402
Wydawca:
F1000 Research Ltd.
DOI:
10.12688/f1000research.13598.1
Autorzy:
Sergio Diaz-del-Pino, Oswaldo Trelles, Juan Falgueras
Opublikowane w:
BMC Genomics, Numer 19/1, 2018, ISSN 1471-2164
Wydawca:
BioMed Central
DOI:
10.1186/s12864-018-4439-x
Autorzy:
Matteo Chiara, Antonio Placido, Ernesto Picardi, Luigi Ruggiero Ceci, David Stephen Horner, Graziano Pesole
Opublikowane w:
BMC Genomics, Numer 19/1, 2018, ISSN 1471-2164
Wydawca:
BioMed Central
DOI:
10.1186/s12864-017-4369-z
Autorzy:
Alexia Giannoula, Alba Gutierrez-Sacristán, Álex Bravo, Ferran Sanz, Laura I. Furlong
Opublikowane w:
Scientific Reports, Numer 8/1, 2018, ISSN 2045-2322
Wydawca:
Nature Publishing Group
DOI:
10.1038/s41598-018-22578-1
Autorzy:
Terje Klemetsen, Inge A Raknes, Juan Fu, Alexander Agafonov, Sudhagar V Balasundaram, Giacomo Tartari, Espen Robertsen, Nils P Willassen
Opublikowane w:
Nucleic Acids Research, Numer 46/D1, 2017, Strona(/y) D692-D699, ISSN 0305-1048
Wydawca:
Oxford University Press
DOI:
10.1093/nar/gkx1036
Autorzy:
Joaquin Dopazo, Cesim Erten
Opublikowane w:
BMC Systems Biology, Numer 11/1, 2017, ISSN 1752-0509
Wydawca:
BioMed Central
DOI:
10.1186/s12918-017-0495-0
Autorzy:
Maria Levchenko, Yuci Gou, Florian Graef, Audrey Hamelers, Zhan Huang, Michele Ide-Smith, Anusha Iyer, Oliver Kilian, Jyothi Katuri, Jee-Hyub Kim, Nikos Marinos, Rakesh Nambiar, Michael Parkin, Xingjun Pi, Frances Rogers, Francesco Talo, Vid Vartak, Aravind Venkatesan, Johanna McEntyre
Opublikowane w:
Nucleic Acids Research, Numer 46/D1, 2017, Strona(/y) D1254-D1260, ISSN 0305-1048
Wydawca:
Oxford University Press
DOI:
10.1093/nar/gkx1005
Autorzy:
Javier Lopez, Jacobo Coll, Matthias Haimel, Swaathi Kandasamy, Joaquin Tarraga, Pedro Furio-Tari, Wasim Bari, Marta Bleda, Antonio Rueda, Stefan Gräf, Augusto Rendon, Joaquin Dopazo, Ignacio Medina
Opublikowane w:
Nucleic Acids Research, Numer 45/W1, 2017, Strona(/y) W189-W194, ISSN 0305-1048
Wydawca:
Oxford University Press
DOI:
10.1093/nar/gkx445
Autorzy:
Alba Gutiérrez-Sacristán, Àlex Bravo, Marta Portero-Tresserra, Olga Valverde, Antonio Armario, M.C. Blanco-Gandía, Adriana Farré, Lierni Fernández-Ibarrondo, Francina Fonseca, Jesús Giraldo, Angela Leis, Anna Mané, M.A. Mayer, Sandra Montagud-Romero, Roser Nadal, Jordi Ortiz, Francisco Javier Pavon, Ezequiel Jesús Perez, Marta Rodríguez-Arias, Antonia Serrano, Marta Torrens, Vincent Warn
Opublikowane w:
Database, Numer 2017/1, 2017, ISSN 1758-0463
Wydawca:
Oxford University Press
DOI:
10.1093/database/bax043
Autorzy:
L. Larcombe, R. Hendricusdottir, T.K. Attwood, F. Bacall, N. Beard, L.J. Bellis, W.B. Dunn, J.M. Hancock, A. Nenadic, C. Orengo, B. Overduin, S-A Sansone, M. Thurston, M.R. Viant, C.L. Winder, C.A. Goble, C.P. Ponting, G. Rustici
Opublikowane w:
F1000Research, Numer 6, 2017, Strona(/y) 952, ISSN 2046-1402
Wydawca:
F1000 Research Ltd.
DOI:
10.12688/f1000research.11837.1
Autorzy:
Rafael C. Jiménez, Mateusz Kuzak, Monther Alhamdoosh, Michelle Barker, Bérénice Batut, Mikael Borg, Salvador Capella-Gutierrez, Neil Chue Hong, Martin Cook, Manuel Corpas, Madison Flannery, Leyla Garcia, Josep Ll. Gelpí, Simon Gladman, Carole Goble, Montserrat González Ferreiro, Alejandra Gonzalez-Beltran, Philippa C. Griffin, Björn Grüning, Jonas Hagberg, Petr Holub, Rob Hooft, Jon Ison, D
Opublikowane w:
F1000Research, Numer 6, 2017, Strona(/y) 876, ISSN 2046-1402
Wydawca:
F1000 Research Ltd.
DOI:
10.12688/f1000research.11407.1
Autorzy:
Víctor López-Ferrando, Andrea Gazzo, Xavier de la Cruz, Modesto Orozco, Josep Ll Gelpí
Opublikowane w:
Nucleic Acids Research, Numer 45/W1, 2017, Strona(/y) W222-W228, ISSN 0305-1048
Wydawca:
Oxford University Press
DOI:
10.1093/nar/gkx313
Autorzy:
Kuzmanic, A.; Sutto, L.; Saladino, G.; Nebreda, A. R.; Gervasio, F. L.; Orozco, M.
Opublikowane w:
eLife , 6 , Article e22175. (2017), Numer 2, 2017, ISSN 2050-084X
Wydawca:
eLife Sciences Publications
DOI:
10.7554/eLife.22175.001
Autorzy:
Héctor Climente-González, Eduard Porta-Pardo, Adam Godzik, Eduardo Eyras
Opublikowane w:
Cell Reports, Numer 20/9, 2017, Strona(/y) 2215-2226, ISSN 2211-1247
Wydawca:
Cell Press
DOI:
10.1016/j.celrep.2017.08.012
Autorzy:
Roni Rasnic, Nathan Linial, Michal Linial
Opublikowane w:
Nucleic Acids Research, Numer 45/9, 2017, Strona(/y) 5048-5060, ISSN 0305-1048
Wydawca:
Oxford University Press
DOI:
10.1093/nar/gkx210
Autorzy:
Annemarie H. Eckes, Tomasz Gubała, Piotr Nowakowski, Tomasz Szymczyszyn, Rachel Wells, Judith A. Irwin, Carlos Horro, John M. Hancock, Graham King, Sarah C. Dyer, Wiktor Jurkowski
Opublikowane w:
F1000Research, Numer 6, 2017, Strona(/y) 465, ISSN 2046-1402
Wydawca:
F1000 Research Ltd.
DOI:
10.12688/f1000research.11301.1
Autorzy:
Antonija Kuzmanic, Ludovico Sutto, Giorgio Saladino, Angel R Nebreda, Francesco L Gervasio, Modesto Orozco
Opublikowane w:
eLife, Numer 6, 2017, ISSN 2050-084X
Wydawca:
eLife Sciences Publications
DOI:
10.7554/eLife.22175
Autorzy:
Juan Antonio Vizcaíno, Mathias Walzer, Rafael C. Jiménez, Wout Bittremieux, David Bouyssié, Christine Carapito, Fernando Corrales, Myriam Ferro, Albert J.R. Heck, Peter Horvatovich, Martin Hubalek, Lydie Lane, Kris Laukens, Fredrik Levander, Frederique Lisacek, Petr Novak, Magnus Palmblad, Damiano Piovesan, Alfred Pühler, Veit Schwämmle, Dirk Valkenborg, Merlijn van Rijswijk, Jiri Vondrasek,
Opublikowane w:
F1000Research, Numer 6, 2017, Strona(/y) 875, ISSN 2046-1402
Wydawca:
F1000 Research Ltd.
DOI:
10.12688/f1000research.11751.1
Autorzy:
Kenzo-Hugo Hillion, Ivan Kuzmin, Anton Khodak, Eric Rasche, Michael Crusoe, Hedi Peterson, Jon Ison, Hervé Ménager
Opublikowane w:
F1000Research, Numer 6, 2017, Strona(/y) 2074, ISSN 2046-1402
Wydawca:
F1000 Research Ltd.
DOI:
10.12688/f1000research.12974.1
Autorzy:
Alba Gutiérrez-Sacristán, Carles Hernández-Ferrer, Juan R González, Laura I Furlong
Opublikowane w:
Bioinformatics, Numer 33/24, 2017, Strona(/y) 4004-4006, ISSN 1367-4803
Wydawca:
Oxford University Press
DOI:
10.1093/bioinformatics/btx506
Autorzy:
Matias M. Falco, Marta Bleda, José Carbonell-Caballero, Joaquín Dopazo
Opublikowane w:
Scientific Reports, Numer 6/1, 2016, ISSN 2045-2322
Wydawca:
Nature Publishing Group
DOI:
10.1038/srep39709
Autorzy:
Marta R. Hidalgo, Cankut Cubuk, Alicia Amadoz, Francisco Salavert, José Carbonell-Caballero, Joaquin Dopazo
Opublikowane w:
Oncotarget, Numer 8/3, 2017, ISSN 1949-2553
Wydawca:
Impact Journals
DOI:
10.18632/oncotarget.14107
Autorzy:
Ana Luisa Toribio, Blaise Alako, Clara Amid, Ana Cerdeño-Tarrága, Laura Clarke, Iain Cleland, Susan Fairley, Richard Gibson, Neil Goodgame, Petra ten Hoopen, Suran Jayathilaka, Simon Kay, Rasko Leinonen, Xin Liu, Josué Martínez-Villacorta, Nima Pakseresht, Jeena Rajan, Kethi Reddy, Marc Rosello, Nicole Silvester, Dmitriy Smirnov, Daniel Vaughan, Vadim Zalunin, Guy Cochrane
Opublikowane w:
Nucleic Acids Research, Numer 45/D1, 2017, Strona(/y) D32-D36, ISSN 0305-1048
Wydawca:
Oxford University Press
DOI:
10.1093/nar/gkw1106
Autorzy:
Janet Piñero, Àlex Bravo, Núria Queralt-Rosinach, Alba Gutiérrez-Sacristán, Jordi Deu-Pons, Emilio Centeno, Javier García-García, Ferran Sanz, Laura I. Furlong
Opublikowane w:
Nucleic Acids Research, Numer 45/D1, 2017, Strona(/y) D833-D839, ISSN 0305-1048
Wydawca:
Oxford University Press
DOI:
10.1093/nar/gkw943
Autorzy:
D. Tabas-Madrid, J. Segura, R. Sanchez-Garcia, J. Cuenca-Alba, C.O.S. Sorzano, J.M. Carazo
Opublikowane w:
Journal of Structural Biology, Numer 194/2, 2016, Strona(/y) 231-234, ISSN 1047-8477
Wydawca:
Academic Press
DOI:
10.1016/j.jsb.2016.02.007
Autorzy:
José Carbonell-Caballero, Alicia Amadoz, Roberto Alonso, Marta R Hidalgo, Cankut Çubuk, David Conesa, Antonio López-Quílez, Joaquín Dopazo
Opublikowane w:
Bioinformatics, Numer 33/22, 2017, Strona(/y) 3511-3517, ISSN 1367-4803
Wydawca:
Oxford University Press
DOI:
10.1093/bioinformatics/btx482
Autorzy:
Carlos Horro, Martin Cook, Teresa K Attwood, Michelle D Brazas, John M Hancock, Patricia Palagi, Manuel Corpas, Rafael Jimenez
Opublikowane w:
Bioinformatics, Numer 33/16, 2017, Strona(/y) 2607-2608, ISSN 1367-4803
Wydawca:
Oxford University Press
DOI:
10.1093/bioinformatics/btx213
Autorzy:
Mona Alshahrani, Mohammad Asif Khan, Omar Maddouri, Akira R Kinjo, Núria Queralt-Rosinach, Robert Hoehndorf
Opublikowane w:
Bioinformatics, Numer 33/17, 2017, Strona(/y) 2723-2730, ISSN 1367-4803
Wydawca:
Oxford University Press
DOI:
10.1093/bioinformatics/btx275
Autorzy:
Joaquim Aguirre-Plans, Janet Piñero, Jörg Menche, Ferran Sanz, Laura Furlong, Harald Schmidt, Baldo Oliva, Emre Guney
Opublikowane w:
Pharmaceuticals, Numer 11/3, 2018, Strona(/y) 61, ISSN 1424-8247
Wydawca:
Multidisciplinary Digital Publishing Institute (MDPI)
DOI:
10.3390/ph11030061
Autorzy:
Stephanie O. M. Dyke, Mikael Linden, Ilkka Lappalainen, Jordi Rambla De Argila, Knox Carey, David Lloyd, J. Dylan Spalding, Moran N. Cabili, Giselle Kerry, Julia Foreman, Tim Cutts, Mahsa Shabani, Laura L. Rodriguez, Maximilian Haeussler, Brian Walsh, Xiaoqian Jiang, Shuang Wang, Daniel Perrett, Tiffany Boughtwood, Andreas Matern, Anthony J. Brookes, Miro Cupak, Marc Fiume, Ravi Pandya, Ilia Tulch
Opublikowane w:
European Journal of Human Genetics, 2018, ISSN 1018-4813
Wydawca:
Natue Publishing Group
DOI:
10.1038/s41431-018-0219-y
Autorzy:
Chacón, Alejandro; Camps, Jordi; Espinosa, Antonio; Gut, Marta; Laurie, Steve; Marco‐Sola, Santiago; Heath, Simon; Trotta, Jean‐Remi; Beltran, Sergi; Gut, Ivo; Fernandez‐Callejo, Marcos
Opublikowane w:
Human Mutation, Numer 2, 2016, ISSN 1098-1004
Wydawca:
Wiley Online Library
DOI:
10.1002/humu.23114
Autorzy:
Youri Hoogstrate, Chao Zhang, Alexander Senf, Jochem Bijlard, Saskia Hiltemann, David van Enckevort, Susanna Repo, Jaap Heringa, Guido Jenster, Remond J.A. Fijneman, Jan-Willem Boiten, Gerrit A. Meijer, Andrew Stubbs, Jordi Rambla, Dylan Spalding, Sanne Abeln
Opublikowane w:
F1000Research, Numer 5, 2016, Strona(/y) 2841, ISSN 2046-1402
Wydawca:
F1000 Research Ltd.
DOI:
10.12688/f1000research.10221.1
Autorzy:
Niklas Blomberg, Arlindo Oliveira, Barend Mons, Bengt Persson, Inge Jonassen
Opublikowane w:
F1000Research, 2015, ISSN 2046-1402
Wydawca:
F1000 Research Ltd.
DOI:
10.12688/f1000research.7587.1
Autorzy:
Aravind Venkatesan, Jee-Hyub Kim, Francesco Talo, Michele Ide-Smith, Julien Gobeill, Jacob Carter, Riza Batista-Navarro, Sophia Ananiadou, Patrick Ruch, Johanna McEntyre
Opublikowane w:
Wellcome Open Research, Numer 1, 2012, Strona(/y) 25, ISSN 2398-502X
Wydawca:
Wellcome Open Research
DOI:
10.12688/wellcomeopenres.10210.1
Autorzy:
Christine Durinx, Jo McEntyre, Ron Appel, Rolf Apweiler, Mary Barlow, Niklas Blomberg, Chuck Cook, Elisabeth Gasteiger, Jee-Hyub Kim, Rodrigo Lopez, Nicole Redaschi, Heinz Stockinger, Daniel Teixeira, Alfonso Valencia
Opublikowane w:
F1000Research, Numer 5, 2016, Strona(/y) 2422, ISSN 2046-1402
Wydawca:
F1000 Research Ltd.
DOI:
10.12688/f1000research.9656.1
Autorzy:
Haydee Artaza, Neil Chue Hong, Manuel Corpas, Angel Corpuz, Rob Hooft, Rafael C. Jimenez, Brane Leskošek, Brett G. Olivier, Jan Stourac, Radka Svobodová Vařeková, Thomas Van Parys, Daniel Vaughan
Opublikowane w:
F1000Research, Numer 5, 2016, Strona(/y) 2000, ISSN 2046-1402
Wydawca:
F1000 Research Ltd.
DOI:
10.12688/f1000research.9206.1
Autorzy:
Adam Hospital, Pau Andrio, Cesare Cugnasco, Laia Codo, Yolanda Becerra, Pablo D. Dans, Federica Battistini, Jordi Torres, Ramón Goñi, Modesto Orozco, Josep Ll. Gelpí
Opublikowane w:
Nucleic Acids Research, Numer 44/D1, 2016, Strona(/y) D272-D278, ISSN 0305-1048
Wydawca:
Oxford University Press
DOI:
10.1093/nar/gkv1301
Autorzy:
Jaroslav Bendl, Jan Stourac, Eva Sebestova, Ondrej Vavra, Milos Musil, Jan Brezovsky, Jiri Damborsky
Opublikowane w:
Nucleic Acids Research, Numer 44/W1, 2016, Strona(/y) W479-W487, ISSN 0305-1048
Wydawca:
Oxford University Press
DOI:
10.1093/nar/gkw416
Autorzy:
Jon Ison, Kristoffer Rapacki, Hervé Ménager, Matúš Kalaš, Emil Rydza, Piotr Chmura, Christian Anthon, Niall Beard, Karel Berka, Dan Bolser, Tim Booth, Anthony Bretaudeau, Jan Brezovsky, Rita Casadio, Gianni Cesareni, Frederik Coppens, Michael Cornell, Gianmauro Cuccuru, Kristian Davidsen, Gianluca Della Vedova, Tunca Dogan, Olivia Doppelt-Azeroual, Laura Emery, Elisabeth Gasteiger, Thomas Gat
Opublikowane w:
Nucleic Acids Research, Numer 44/D1, 2016, Strona(/y) D38-D47, ISSN 0305-1048
Wydawca:
Oxford University Press
DOI:
10.1093/nar/gkv1116
Autorzy:
Francisco Salavert, Marta R. Hidago, Alicia Amadoz, Cankut Çubuk, Ignacio Medina, Daniel Crespo, Jose Carbonell-Caballero, Joaquín Dopazo
Opublikowane w:
Nucleic Acids Research, Numer 44/W1, 2016, Strona(/y) W212-W216, ISSN 0305-1048
Wydawca:
Oxford University Press
DOI:
10.1093/nar/gkw369
Autorzy:
Àlex Bravo, Tong Shu Li, Andrew I. Su, Benjamin M. Good, Laura I. Furlong
Opublikowane w:
Database, Numer 2016, 2016, Strona(/y) baw094, ISSN 1758-0463
Wydawca:
Oxford University Press
DOI:
10.1093/database/baw094
Autorzy:
Jiří Damborský; Jaroslav Zendulka; Miloš Musil; Jan Štourač; Jaroslav Bendl; Jan Brezovský
Opublikowane w:
PLoS Computational Biology, Numer 1, 2016, ISSN 1553-734X
Wydawca:
Public Library of Science
DOI:
10.1371/journal.pcbi.1004962
Autorzy:
D. Digles, B. Zdrazil, J.-M. Neefs, H. Van Vlijmen, C. Herhaus, A. Caracoti, J. Brea, B. Roibás, M. I. Loza, N. Queralt-Rosinach, L. I. Furlong, A. Gaulton, L. Bartek, S. Senger, C. Chichester, O. Engkvist, C. T. Evelo, N. I. Franklin, D. Marren, G. F. Ecker, E. Jacoby
Opublikowane w:
Med. Chem. Commun., Numer 7/6, 2016, Strona(/y) 1237-1244, ISSN 2040-2503
Wydawca:
Royal Society of Chemistry
DOI:
10.1039/C6MD00065G
Autorzy:
Tong Shu Li, Àlex Bravo, Laura I. Furlong, Benjamin M. Good, Andrew I. Su
Opublikowane w:
Database, Numer 2016, 2016, Strona(/y) baw051, ISSN 1758-0463
Wydawca:
Oxford University Press
DOI:
10.1093/database/baw051
Autorzy:
Núria Queralt-Rosinach, Janet Piñero, Àlex Bravo, Ferran Sanz, Laura I. Furlong
Opublikowane w:
Bioinformatics, Numer 32/14, 2016, Strona(/y) 2236-2238, ISSN 1367-4803
Wydawca:
Oxford University Press
DOI:
10.1093/bioinformatics/btw214
Autorzy:
Janet Piñero, Ariel Berenstein, Abel Gonzalez-Perez, Ariel Chernomoretz, Laura I. Furlong
Opublikowane w:
Scientific Reports, Numer 6, 2016, Strona(/y) 24570, ISSN 2045-2322
Wydawca:
Nature Publishing Group
DOI:
10.1038/srep24570
Autorzy:
Lukáš Pravda, David Sehnal, Dominik Toušek, Veronika Navrátilová, Václav Bazgier, Karel Berka, Radka Svobodová Vařeková, Jaroslav Koča, Michal Otyepka
Opublikowane w:
Nucleic Acids Research, Numer 46/W1, 2018, Strona(/y) W368-W373, ISSN 0305-1048
Wydawca:
Oxford University Press
DOI:
10.1093/nar/gky309
Autorzy:
Gaël Manes, Willy Joly, Thomas Guignard, Vasily Smirnov, Sylvie Berthemy, Béatrice Bocquet, Isabelle Audo, Christina Zeitz, José Sahel, Chantal Cazevieille, Audrey Sénéchal, Jean-François Deleuze, Hélène Blanché-Koch, Anne Boland, Patrick Carroll, David Geneviève, Xavier Zanlonghi, Carl Arndt, Christian P Hamel, Sabine Defoort-Dhellemmes, Isabelle Meunier
Opublikowane w:
Human Molecular Genetics, Numer 26/22, 2017, Strona(/y) 4367-4374, ISSN 0964-6906
Wydawca:
Oxford University Press
DOI:
10.1093/hmg/ddx322
Autorzy:
Alexandre Almeida, Alex L Mitchell, Aleksandra Tarkowska, Robert D Finn
Opublikowane w:
GigaScience, Numer 7/5, 2018, ISSN 2047-217X
Wydawca:
GigaScience, Oxford University Press
DOI:
10.1093/gigascience/giy054
Autorzy:
Sergio Díaz-del-Pino, Juan Falgueras, Esteban Perez-Wohlfeil, Oswaldo Trelles
Opublikowane w:
Bioinformatics, Numer 34/5, 2017, Strona(/y) 869-870, ISSN 1367-4803
Wydawca:
Oxford University Press
DOI:
10.1093/bioinformatics/btx673
Autorzy:
Inge Alexander Raknes, Lars Ailo Bongo
Opublikowane w:
F1000Research, Numer 7, 2018, Strona(/y) 32, ISSN 2046-1402
Wydawca:
F1000 Research Ltd.
DOI:
10.12688/f1000research.13256.2
Autorzy:
Adam Hospital, Michela Candotti, Josep Lluís Gelpí, Modesto Orozco
Opublikowane w:
The Journal of Physical Chemistry B, Numer 121/15, 2017, Strona(/y) 3636-3643, ISSN 1520-6106
Wydawca:
American Chemical Society
DOI:
10.1021/acs.jpcb.6b09676
Autorzy:
Doppelt-Azeroual, O., Mareuil F., Deveaud, E.; Kalaš, M., Soranzo, N.; van den Beek, M., Grüning, B., Ison, J. and Ménager, H.
Opublikowane w:
GigaScience, 2017, ISSN 2047-217X
Wydawca:
Oxford University Press
DOI:
10.1093/gigascience/gix022
Autorzy:
Oliver S. Smart, Vladimír Horský, Swanand Gore, Radka Svobodová Vařeková, Veronika Bendová, Gerard J. Kleywegt, Sameer Velankar
Opublikowane w:
Acta Crystallographica Section D Structural Biology, Numer 74/3, 2018, Strona(/y) 228-236, ISSN 2059-7983
Wydawca:
Acta Crystallographica Section D - STRUCTURAL BIOLOGY
DOI:
10.1107/S2059798318002541
Autorzy:
Luc Mottin, Julien Gobeill, Emilie Pasche, Pierre-André Michel, Isabelle Cusin, Pascale Gaudet, Patrick Ruch
Opublikowane w:
Database, Numer 2016, 2016, Strona(/y) baw098, ISSN 1758-0463
Wydawca:
Oxford University Press
DOI:
10.1093/database/baw098
Autorzy:
Oliver S. Smart, Vladimír Horský, Swanand Gore, Radka Svobodová Vařeková, Veronika Bendová, Gerard J. Kleywegt, Sameer Velankar
Opublikowane w:
Acta Crystallographica Section D Structural Biology, Numer 74/3, 2018, Strona(/y) 237-244, ISSN 2059-7983
Wydawca:
Acta Crystallographica Section D
DOI:
10.1107/S2059798318003303
Autorzy:
E. Chacón‐Solano, C. León, F. Díaz, F. García‐García, M. García, M.J. Escámez, S. Guerrero‐Aspizua, C.J. Conti, Á. Mencía, L. Martínez‐Santamaría, S. Llames, M. Pévida, J. Carbonell‐Caballero, J.A. Puig‐Butillé, R. Maseda, S. Puig, R. de Lucas, E. Baselga, F. Larcher, J. Dopazo, M. Río
Opublikowane w:
British Journal of Dermatology, Numer 181/3, 2019, Strona(/y) 512-522, ISSN 0007-0963
Wydawca:
Blackwell Publishing Inc.
DOI:
10.1111/bjd.17698
Autorzy:
Cankut Çubuk, Marta R. Hidalgo, Alicia Amadoz, Kinza Rian, Francisco Salavert, Miguel A. Pujana, Francesca Mateo, Carmen Herranz, Jose Carbonell-Caballero, Joaquín Dopazo
Opublikowane w:
npj Systems Biology and Applications, Numer 5/1, 2019, ISSN 2056-7189
Wydawca:
Europe PMC
DOI:
10.1038/s41540-019-0087-2
Autorzy:
Espen Mikal Robertsen, Hubert Denise, Alex Mitchell, Robert D. Finn, Lars Ailo Bongo, Nils Peder Willassen
Opublikowane w:
F1000Research, 2017, ISSN 2046-1402
Wydawca:
F1000 Research Ltd.
DOI:
10.12688/f1000research.10443.1
Autorzy:
B. Fosso M. Santamaria M. D’Antonio D. Lovero G. Corrado E. Vizza N. Passaro A.R. Garbuglia M.R. Capobianchi M. Crescenzi G. Valiente G. Pesole
Opublikowane w:
Bioinformatics, 2017, ISSN 1460-2059
Wydawca:
Oxford University Press
DOI:
10.1093/bioinformatics/btx036
Autorzy:
Mark D. Wilkinson, Michel Dumontier, IJsbrand Jan Aalbersberg, Gabrielle Appleton, Myles Axton, Arie Baak, Niklas Blomberg, Jan-Willem Boiten, Luiz Bonino da Silva Santos, Philip E. Bourne, Jildau Bouwman, Anthony J. Brookes, Tim Clark, Mercè Crosas, Ingrid Dillo, Olivier Dumon, Scott Edmunds, Chris T. Evelo, Richard Finkers, Alejandra Gonzalez-Beltran, Alasdair J.G. Gray, Paul Groth, Carole Gobl
Opublikowane w:
Sci Data, 2016, ISSN 2052-4463
Wydawca:
Springer Nature
DOI:
10.1038/sdata.2016.18
Autorzy:
Amadís Pagès, Ivan Dotu, Joan Pallarès-Albanell, Eulàlia Martí, Roderic Guigó, Eduardo Eyras
Opublikowane w:
Nucleic Acids Research, Numer 46/3, 2017, Strona(/y) e15-e15, ISSN 0305-1048
Wydawca:
Oxford University Press
DOI:
10.1093/nar/gkx1115
Autorzy:
Nicole Silvester, Blaise Alako, Clara Amid, Ana Cerdeño-Tarrága, Laura Clarke, Iain Cleland, Peter W Harrison, Suran Jayathilaka, Simon Kay, Thomas Keane, Rasko Leinonen, Xin Liu, Josué Martínez-Villacorta, Manuela Menchi, Kethi Reddy, Nima Pakseresht, Jeena Rajan, Marc Rossello, Dmitriy Smirnov, Ana L Toribio, Daniel Vaughan, Vadim Zalunin, Guy Cochrane
Opublikowane w:
Nucleic Acids Research, Numer 46/D1, 2017, Strona(/y) D36-D40, ISSN 0305-1048
Wydawca:
Oxford University Press
DOI:
10.1093/nar/gkx1125
Autorzy:
Lukáš Pravda, David Sehnal, Radka Svobodová Vařeková, Veronika Navrátilová, Dominik Toušek, Karel Berka, Michal Otyepka, Jaroslav Koča
Opublikowane w:
Nucleic Acids Research, Numer 46/D1, 2017, Strona(/y) D399-D405, ISSN 0305-1048
Wydawca:
Oxford University Press
DOI:
10.1093/nar/gkx868
Autorzy:
Alex L Mitchell, Maxim Scheremetjew, Hubert Denise, Simon Potter, Aleksandra Tarkowska, Matloob Qureshi, Gustavo A Salazar, Sebastien Pesseat, Miguel A Boland, Fiona M I Hunter, Petra ten Hoopen, Blaise Alako, Clara Amid, Darren J Wilkinson, Thomas P Curtis, Guy Cochrane, Robert D Finn
Opublikowane w:
Nucleic Acids Research, Numer 46/D1, 2017, Strona(/y) D726-D735, ISSN 0305-1048
Wydawca:
Oxford University Press
DOI:
10.1093/nar/gkx967
Autorzy:
Konstantinos Zagganas, Thanasis Vergoulis, Maria D. Paraskevopoulou, Ioannis S. Vlachos, Spiros Skiadopoulos, Theodore Dalamagas
Opublikowane w:
BMC Bioinformatics, Numer 18/1, 2017, ISSN 1471-2105
Wydawca:
BioMed Central
DOI:
10.1186/s12859-017-1812-8
Autorzy:
José M. Juanes, Asunción Gallego, Joaquín Tárraga, Felipe J. Chaves, Pablo Marín-Garcia, Ignacio Medina, Vicente Arnau, Joaquín Dopazo
Opublikowane w:
BMC Bioinformatics, Numer 18/1, 2017, ISSN 1471-2105
Wydawca:
BioMed Central
DOI:
10.1186/s12859-017-1837-z
Autorzy:
Sarah L Morgan, Patricia M Palagi, Pedro L Fernandes, Eija Koperlainen, Jure Dimec, Diana Marek, Lee Larcombe, Gabriella Rustici, Teresa K Attwood, Allegra Via
Opublikowane w:
F1000Research, Numer 6, 2017, Strona(/y) 1557, ISSN 2046-1402
Wydawca:
F1000 Research Ltd.
DOI:
10.12688/f1000research.12332.1
Autorzy:
Chao Zhang, Jochem Bijlard, Christine Staiger, Serena Scollen, David van Enckevort, Youri Hoogstrate, Alexander Senf, Saskia Hiltemann, Susanna Repo, Wibo Pipping, Mariska Bierkens, Stefan Payralbe, Bas Stringer, Jaap Heringa, Andrew Stubbs, Luiz Olavo Bonino Da Silva Santos, Jeroen Belien, Ward Weistra, Rita Azevedo, Kees van Bochove, Gerrit Meijer, Jan-Willem Boiten, Jordi Rambla, Remond Fijnema
Opublikowane w:
F1000Research, Numer 6, 2017, Strona(/y) 1488, ISSN 2046-1402
Wydawca:
F1000 Research Ltd.
DOI:
10.12688/f1000research.12168.1
Autorzy:
Aleksandra Pawlik, Celia W.G. van Gelder, Aleksandra Nenadic, Patricia M. Palagi, Eija Korpelainen, Philip Lijnzaad, Diana Marek, Susanna-Assunta Sansone, John Hancock, Carole Goble
Opublikowane w:
F1000Research, Numer 6, 2017, Strona(/y) 1040, ISSN 2046-1402
Wydawca:
F1000 Research Ltd.
DOI:
10.12688/f1000research.11718.1
Autorzy:
Daniel Faria, Catia Pesquita, Isabela Mott, Catarina Martins, Francisco M. Couto, Isabel F. Cruz
Opublikowane w:
Journal of Biomedical Semantics, Numer 9/1, 2018, ISSN 2041-1480
Wydawca:
Journal of Biomedical Science
DOI:
10.1186/s13326-017-0170-9
Autorzy:
Petra ten Hoopen, Robert D. Finn, Lars Ailo Bongo, Erwan Corre, Bruno Fosso, Folker Meyer, Alex Mitchell, Eric Pelletier, Graziano Pesole, Monica Santamaria, Nils Peder Willassen, Guy Cochrane
Opublikowane w:
GigaScience, Numer 6/8, 2017, Strona(/y) 1-11, ISSN 2047-217X
Wydawca:
Oxford Academic
DOI:
10.1093/gigascience/gix047
Autorzy:
Susanna-Assunta Sansone, Alejandra Gonzalez-Beltran, Philippe Rocca-Serra, George Alter, Jeffrey S. Grethe, Hua Xu, Ian M. Fore, Jared Lyle, Anupama E. Gururaj, Xiaoling Chen, Hyeon-eui Kim, Nansu Zong, Yueling Li, Ruiling Liu, I. Burak Ozyurt, Lucila Ohno-Machado
Opublikowane w:
Scientific Data, Numer 4, 2017, Strona(/y) 170059, ISSN 2052-4463
Wydawca:
Nature Research
DOI:
10.1038/sdata.2017.59
Autorzy:
António Marcos Ramos, Ana Usié, Pedro Barbosa, Pedro M. Barros, Tiago Capote, Inês Chaves, Fernanda Simões, Isabl Abreu, Isabel Carrasquinho, Carlos Faro, Joana B. Guimarães, Diogo Mendonça, Filomena Nóbrega, Leandra Rodrigues, Nelson J. M. Saibo, Maria Carolina Varela, Conceição Egas, José Matos, Célia M. Miguel, M. Margarida Oliveira, Cândido P. Ricardo, Sónia Gonçalves
Opublikowane w:
Scientific Data, Numer 5, 2018, Strona(/y) 180069, ISSN 2052-4463
Wydawca:
Scientific Data
DOI:
10.1038/sdata.2018.69
Autorzy:
Sarala M. Wimalaratne, Nick Juty, John Kunze, Greg Janée, Julie A. McMurry, Niall Beard, Rafael Jimenez, Jeffrey S. Grethe, Henning Hermjakob, Maryann E. Martone, Tim Clark
Opublikowane w:
Scientific Data, Numer 5, 2018, Strona(/y) 180029, ISSN 2052-4463
Wydawca:
Scientific Data
DOI:
10.1038/sdata.2018.29
Autorzy:
Segura, Joan; Sanchez-Garcia, Ruben; Martinez, Marta; Cuenca-Alba, Jesus; Tabas-Madrid, Daniel; Sorzano, C.O.S; Carazo, JM
Opublikowane w:
Bioinformatics, 2017, ISSN 1460-2059
Wydawca:
Oxford Journals
DOI:
10.5281/zenodo.1038019
Autorzy:
Celia van Gelder; Sarah Morgan; Allegra Via; Rita Hendricusdottir; Eija Korpelainen; Chris Ponting; Terri Attwood; Patricia Palagi
Opublikowane w:
Zenodo, 2016, ISSN 0000-0000
Wydawca:
Zenodo
DOI:
10.5281/zenodo.61411
Autorzy:
M. Gonzalez; S. Suhr
Opublikowane w:
Zenodo, 2016, ISSN 0000-0000
Wydawca:
Zenodo
DOI:
10.5281/zenodo.61417
Autorzy:
Lars Ailo Bongo; Mikael Borg; Amelie Cornelis; Montserrat Gonzalez; Luis Gracia; Rob Hooft; Jarno Laitinen; Ilkka Lappalainen; Mikael Linden; Ludek Matyska; Steven Newhouse; Tommi Nyrönen; Michal Prochazka; Mirek Ruda; Harri Salminen; Christine Staiger; Tony Wildish
Opublikowane w:
Zenodo, 2016, ISSN 0000-0000
Wydawca:
Zenodo
DOI:
10.5281/zenodo.60291
Autorzy:
Johanna McEntyre; Christine Durinx; ELIXIR Partners
Opublikowane w:
Zenodo, 2016, ISSN 0000-0000
Wydawca:
Zenodo
DOI:
10.5281/zenodo.60706
Autorzy:
All EXCELERATE-funded partners, and many other non- ELIXIR organisations (see https://bio.tools/governance) have contributed to this work
Opublikowane w:
Zenodo, 2016, ISSN 0000-0000
Wydawca:
Zenodo
DOI:
10.5281/zenodo.61416
Autorzy:
Dylan Spalding; Helen Parkinson; Jordi Rambla; Niclas Jareborg; Abdulrahman Azab; Ilkka Lappalainen; Jeff Almaida-King; Alexander Senf; Saif Ur-Rehman
Opublikowane w:
Zenodo, 2016, ISSN 0000-0000
Wydawca:
Zenodo
DOI:
10.5281/zenodo.61414
Autorzy:
Salvador Capella-Gutierrez; Diana de la Iglesia; Jürgen Haas; Josep Lluís Gelpi; José María Fernández
Opublikowane w:
Zenodo, 2017, ISSN 0000-0000
Wydawca:
Zenodo
DOI:
10.5281/zenodo.557010
Autorzy:
Inge Alexander Raknes; Guy Cochrane; Lars Ailo Bongo; Nils Peder Willassen; Rob Finn; Juan Fu; Sudhagar Veerabadran Balasundaram; Espen Robertsen; Terje Klementsen; Giacomo Tartari
Opublikowane w:
Zenodo, 2017, ISSN 0000-0000
Wydawca:
Zenodo
DOI:
10.5281/zenodo.557021
Autorzy:
Stephanie Suhr; Niklas Blomberg
Opublikowane w:
Zenodo, 2016, ISSN 0000-0000
Wydawca:
Zenodo
DOI:
10.5281/zenodo.557027
Autorzy:
Jaako Vilo; Ondřej Hradil; Babis Savakis; Brane Leskosek
Opublikowane w:
Zenodo, 2017, ISSN 0000-0000
Wydawca:
Zenodo
DOI:
10.5281/zenodo.557029
Autorzy:
Ivo Gut; Marco Roos; et al.
Opublikowane w:
Zenodo, 2016, ISSN 0000-0000
Wydawca:
Zenodo
DOI:
10.5281/zenodo.557065
Autorzy:
Henrik Lantz; Bengt Persson
Opublikowane w:
Zenodo, 2016, ISSN 0000-0000
Wydawca:
Zenodo
DOI:
10.5281/zenodo.557060
Autorzy:
Pérez-Pérez, Martin; Rabal, Obdulia; Pérez-Rodríguez, Gael; Vazquez, Miguel; Fdez-Riverola, Florentino; Oyarzabal, Julen; Valencia, Alfonso; Lourenço, Anália; Krallinger, Martin
Opublikowane w:
2017
Wydawca:
Universidade do Minho
Autorzy:
Palagi, Patricia M.; van Gelder, Celia W. G.; Attwood, Teresa K; Leskosek, Brane L.; Morgan, Sarah; Dimec, Jure; Mulder, Nicola
Opublikowane w:
Numer 1, 2016
Wydawca:
Zenodo
DOI:
10.5281/zenodo.166378
Autorzy:
Carole Goble; Rafael Jimenez; Alasdair Gray; Niall Beard; Giuseppe Profiti; Norman Morrison
Opublikowane w:
2017
Wydawca:
f1000Research
DOI:
10.7490/f1000research.1114493.1
Autorzy:
Kalaš, Matúš; Plantard, Laure; Sladoje, Nataša; Lindblad, Joakim; Kirschmann, Moritz,; Jones, Martin; Chessel, Anatole; Scholz, Leandro,; Rössler, Fabienne; Dufour, Alexandre; Bogovic, John; Zhang, Chong; Waithe, Dominic; Sampaio, Paula; Paavolainen, Lassi; Hörl, David; Munck, Sebastien; Golani, Ofra; Moore, Josh; Gaignard, Alban; Levet, Florian; Paul-Gilloteaux, Perrine; Ison, Jon; Miura, K
Opublikowane w:
NEUBIAS, Feb 2019, Luxembourg, Luxembourg, Numer 1, 2019
Wydawca:
HAL
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