Smart capture phases for proteomics, glycomics and biomarker assays

Información del proyecto

BioCapture

Identificador del acuerdo de subvención: 722171

DOI

10.3030/722171

Proyecto cerrado

Fecha de la firma de la CE 31 Agosto 2016

Fecha de inicio 1 Noviembre 2016

Fecha de finalización 31 Octubre 2021

Financiado con arreglo a

• EXCELLENT SCIENCE - Marie Skłodowska-Curie Actions

Coste total

€ 2 982 872,07

Aportación de la UE

€ 2 982 872,07

Coordinado por

MALMO UNIVERSITET
Sweden

CORDIS proporciona enlaces a los documentos públicos y las publicaciones de los proyectos de los programas marco HORIZONTE.

Los enlaces a los documentos y las publicaciones de los proyectos del Séptimo Programa Marco, así como los enlaces a algunos tipos de resultados específicos, como conjuntos de datos y «software», se obtienen dinámicamente de OpenAIRE .

Resultado final

Documents, reports (1)

Project vacancies advertised

Websites, patent fillings, videos etc. (3)

Project website published and accessible
Produce a minimum of two press releases
Produce a project poster and a presentation

Publicaciones

Peer reviewed articles (23)

Magnetic Synthetic Receptors for Selective Clean-Up in Protein Biomarker Quantification

Autores: Nicholas McKitterick, Frida Braathen, Magdalena A. Switnicka-Plak, Peter A. G. Cormack, Léon Reubsaet, Trine Grønhaug Halvorsen
Publicado en: Journal of Proteome Research, Edición 19/8, 2020, Página(s) 3573-3582, ISSN 1535-3893
Editor: American Chemical Society
DOI: 10.1021/acs.jproteome.0c00258

Oxoanion Imprinting Combining Cationic and Urea Binding Groups: A Potent Glyphosate Adsorber

Autores: Sudhirkumar Shinde, Mona Mansour, Liliia Mavliutova, Anil Incel, Celina Wierzbicka, Hussein I. Abdel-Shafy, and Börje Sellergren
Publicado en: ACS Omega, 2021, ISSN 2470-1343
Editor: American Chemical Society
DOI: 10.1021/acsomega.1c05079

Urea-based imprinted polymer hosts with switchable anion preference

Autores: Sudhirkumar Shinde; Sudhirkumar Shinde; Anıl İncel; Mona Mansour; Gustaf D. Olsson; Ian A. Nicholls; Cem Esen; Javier Urraca; Börje Sellergren; Börje Sellergren
Publicado en: Journal of the American Chemical Society, Edición 142(26), 2020, ISSN 0002-7863
Editor: American Chemical Society
DOI: 10.1021/jacs.0c00707

Improved Solvothermal Synthesis of γ-Fe2O3 Magnetic Nanoparticles for SiO2 Coating

Autores: Rashmi Mahajan; Subramanian Suriyanarayanan; Ian A. Nicholls
Publicado en: Nanomaterials, Edición 11(8), 2021, ISSN 2079-4991
Editor: MDPI
DOI: 10.3390/nano11081889

Affinity capture in bottom-up protein analysis –overview of current status of proteolytic peptide capture using antibodies and molecularly imprinted polymers

Autores: Halvorsen TG, McKitterick N, Kish, M.; Reubsaet, L.
Publicado en: Anal. Chim. Acta, Edición 1182, 2021, ISSN 0003-2670
Editor: Elsevier BV
DOI: 10.1016/j.aca.2021.338714

The glycosylation design space for recombinant lysosomal replacement enzymes produced in CHO cells.

Autores: Weihua Tian, Zilu Ye, Shengjun Wang, Morten Alder Schulz, Julie Van Coillie, Lingbo Sun, Yen-Hsi Chen, Yoshiki Narimatsu, Lars Hansen, Claus Kristensen, Ulla Mandel, Eric Paul Bennett, Siamak Jabbarzadeh-Tabrizi, Raphael Schiffmann, Jin-Song Shen, Sergey Y. Vakhrushev, Henrik Clausen & Zhang Yang
Publicado en: Nature Communications, Edición 10, 2019, ISSN 2041-1723
Editor: Nature Publishing Group
DOI: 10.1038/s41467-019-09809-3

Strategies for Molecular Imprinting and the Evolution of MIP Nanoparticles as Plastic Antibodies—Synthesis and Applications

Autores: Refaat, D.; Aggour, M. G.; Farghali, A. A.; Mahajan, R.; Wiklander, J. G.; Nicholls, I. A.; Piletsky, S. A.
Publicado en: Int. Journal of Molecular Sciences, Edición 20(24), 2019, ISSN 1422-0067
Editor: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms20246304

Selective Enrichment of Histidine Phosphorylated Peptides Using Molecularly Imprinted Polymers

Autores: Anıl Incel, Ignacio Arribas Díez, Celina Wierzbicka, Katarzyna Gajoch, Ole N. Jensen, Börje Sellergren
Publicado en: Analytical Chemistry, 2021, ISSN 0003-2700
Editor: American Chemical Society
DOI: 10.1021/acs.analchem.0c04474

An Atlas of Human Glycosylation Pathways Enables Display of the Human Glycome by Gene Engineered Cells

Autores: Narimatsu, Yoshiki; Joshi, Hiren J.; Nason, Rebecca; Van Coillie, Julie; Karlsson, Richard; Sun, Lingbo; Ye, Zilu; Chen, Yen-Hsi; Schjoldager, Katrine T.; Steentoft, Catharina; Furukawa, Sanae; Bensing, Barbara A.; Sullam, Paul M.; Thompson, Andrew J.; Paulson, James C.; Büll, Christian; Adema, Gosse J.; Mandel, Ulla; Hansen, Lars; Bennett, Eric Paul; Varki, Ajit; Vakhrushev, Sergey Y.; Yang, Zha
Publicado en: Mol Cell, Edición 75(2), 2019, ISSN 1097-2765
Editor: Cell Press
DOI: 10.1016/j.molcel.2019.05.017

Zirconium(IV)-IMAC Revisited: Improved Performance and Phosphoproteome Coverage by Magnetic Microparticles for Phosphopeptide Affinity Enrichment

Autores: Ignacio Arribas Diez, Ireshyn Govender, Previn Naicker, Stoyan Stoychev, Justin Jordaan, Ole N. Jensen
Publicado en: J. Proteome Research, Edición 20, 2021, ISSN 1535-3893
Editor: American Chemical Society
DOI: 10.1021/acs.jproteome.0c00508

The Use of Computational Methods for the Development of Molecularly Imprinted Polymers

Autores: Ian A. Nicholls; Kerstin Golker; Gustaf D. Olsson; Subramanian Suriyanarayanan; Jesper G. Wiklander
Publicado en: Polymers, Vol 13, Iss 2841, p 2841 (2021), Edición 1, 2021, ISSN 2073-4360
Editor: MDPI
DOI: 10.3390/polym13172841

Exploring Regulation of Protein O-Glycosylation in Isogenic Human HEK293 Cells by Differential O-Glycoproteomics

Autores: Narimatsu Y, Joshi HJ, Schjoldager KT, Hintze J, Halim A, Steentoft C, Nason R, Mandel U, Bennett EP, Clausen H, Vakhrushev SY
Publicado en: Mol. Cell Proteomics, Edición 18(7), 2019, ISSN 1535-9476
Editor: American Society for Biochemistry and Molecular Biology Inc.
DOI: 10.1074/mcp.ra118.001121

High salt compatible oxyanion receptors by dual ion imprinting

Autores: Sudhirkumar Shinde; Mona Mansour; Anıl İncel; Liliia Mavliutova; Celina Wierzbicka; Börje Sellergren
Publicado en: Chemical Science, Edición 11 (16), 2020, ISSN 2041-6520
Editor: Royal Society of Chemistry
DOI: 10.1039/c9sc06508c

Combinatorial design of a sialic acid imprinted binding site exploring a dual ion receptor approach

Autores: Liliia Mavliutova; Elena Verduci; Börje Sellergren
Publicado en: RSC Advances, Edición 11, 2021, Página(s) 34329-34337, ISSN 2046-2069
Editor: Royal Society of Chemistry
DOI: 10.1039/d1ra06962d

Mesoporous polymeric microspheres with high affinity for phosphorylated biomolecules

Autores: Sudhirkumar Shinde, Jayashree Selvalatchmanan, Anil Incel, Maedeh Akhoundian, Anne K. Bendt, Federico Torta
Publicado en: New Journal of Chemistry, Edición 42/11, 2018, Página(s) 8603-8608, ISSN 1144-0546
Editor: Royal Society of Chemistry
DOI: 10.1039/C8NJ01114A

Highly efficient synthesis and assay of protein imprinted nanogels using magnetic templates

Autores: Rashmi Mahajan, Mona Rouhi, Sudhirkumar Shinde, Thomas Bedwell, Anil Incel, Liliia Mavliutova, Sergey Piletsky, Ian Nicholls, Börje K-E Sellergren
Publicado en: Angewandte Chemie International Edition, Edición 58 (3), 2018, ISSN 1433-7851
Editor: John Wiley & Sons Ltd.
DOI: 10.1002/anie.201805772

Selective detection of phospholipids using molecularly imprinted fluorescent sensory core-shell particles.

Autores: Qianjin Li, Sudhirkumar Shinde, Giuliana Grasso, Antonio Caroli, Rahma Abouhany, Michele Lanzillotta, Guoqing Pan, Wei Wan, Knut Rurack & Börje Sellergren
Publicado en: Nature Scientific Report, Edición 10, 2020, ISSN 2045-2322
Editor: Nature Publishing Group
DOI: 10.1038/s41598-020-66802-3

Facilitating serum determination of neuron specific enolase at clinically relevant levels by coupling on-line molecularly imprinted solid-phase extraction to LC-MS/MS

Autores: Nicholas McKitterick, Tugrul Cem Bicak, Peter A. G. Cormack, Léon Reubsaet, and Trine Grønhaug Halvorsen
Publicado en: Anal. Chim. Acta, Edición 1140, 2020, ISSN 0003-2670
Editor: Elsevier BV
DOI: 10.1016/j.aca.2020.10.022

Engineering mammalian cells to produce plant-specific N-glycosylation on proteins

Autores: Joachim Steen Larsen; Richard Karlsson; Weihua Tian; Morten Alder Schulz; Annemarie Matthes; Henrik Clausen; Bent Larsen Petersen; Zhang Yang
Publicado en: Glycobiology, Edición 1, 2020, ISSN 0959-6658
Editor: Oxford University Press
DOI: 10.1093/glycob/cwaa009

Probing the binding specificities of human Siglecs by cell-based glycan arrays

Autores: Christian Büll; Rebecca Nason; Lingbo Sun; Julie Van Coillie; Daniel Madriz Sørensen; Sam J. Moons; Zhang Yang; Steven Arbitman; Steve M. Fernandes; Sanae Furukawa; Ryan McBride; Corwin M. Nycholat; Gosse J. Adema; James C. Paulson; Ronald L. Schnaar; Thomas J. Boltje; Henrik Clausen; Yoshiki Narimatsu
Publicado en: Proc Natl Acad Sci U S A, Edición 118(17), 2021, ISSN 0027-8424
Editor: National Academy of Sciences
DOI: 10.1073/pnas.2026102118

On-line duplex molecularly imprinted solid-phase extraction for analysis of low-abundant biomarkers in human serum by liquid chromatography-tandem mass spectrometry

Autores: McKitterick, N.; Bicak, T. C.; Switnicka-Plak, M. A.; Cormack, P. A. G.; Reubsaet, L.; Halvorsen, T. G.
Publicado en: J. Chromatogr. A, Edición 1655, 2021, ISSN 0021-9673
Editor: Elsevier BV
DOI: 10.1016/j.chroma.2021.462490

Discrimination between sialic acid linkage modes using sialyllactose-imprinted polymers

Autores: Liliia Mavliutova; Bruna Munoz Aldeguer; Jesper Wiklander; Celina Wierzbicka; Chau Minh Huynh; Ian A. Nicholls; Knut Irgum; Börje Sellergren
Publicado en: RSC Advances, Edición 11, 2021, ISSN 2046-2069
Editor: Royal Society of Chemistry
DOI: 10.1039/d1ra02274a

Display of the human mucinome with defined O-glycans by gene engineered cells

Autores: Nason R, Büll C, KonstantinidiA, SunL, Ye Z, HalimA, Wenjuan Du, SørensenD, FurukawaS, MandelU, JoshiH, DworkinL, HansenL, DavidL, IversonR, BensingB, SullamP, VarkiA, de VrieE, de HaanC, VincentelliR, HenrissatB, VakhrushevS, ClausenH, Narimatsu
Publicado en: Nature Communications, Edición 12, 2021, ISSN 2041-1723
Editor: Nature Publishing Group
DOI: 10.1038/s41467-021-24366-4

Thesis and dissertations (4)

Molecularly Imprinted Polymers for the Analysis of Small Cell Lung Cancer Biomarkers by Liquid Chromatography-Tandem Mass Spectrometry

Autores: Nicholas McKitterick
Publicado en: Edición 15017710, 2021, ISSN 1501-7710
Editor: University of Oslo

Moleculary imprinted micro- and nanoparticles for cancer associated glycan motifs

Autores: Liliia Mavliutova
Publicado en: 2021, ISBN 9789178772056
Editor: Malmö University

Molecularly imprinted polymers for small cell lung cancer diagnosis

Autores: Bicak,Tugrul Cem
Publicado en: 2021
Editor: University of Strathclyde
DOI: 10.48730/0eyc-aj60

Amino acid sequence and side chain specific synthetic receptors targeting protein phosphorylation

Autores: Anil Incel
Publicado en: Malmö University, 2021, ISBN 9789178772070
Editor: Malmö University
DOI: 10.24834/isbn.9789178772087

Other (2)

Plastantikroppar som hittar cancerceller

Autores: EVA BARTONEK ROXÅ
Publicado en: Vetenskap och Hälsa, 2019
Editor: Lund University

Zirconium(IV)-IMAC for phosphopeptide enrichment in phosphoproteomics

Autores: IA Diez; Ireshyn S Govender; Previn Naicker; Stoyan Stoychev; Justin Jordaan; Ole Noerregaard Jensen
Publicado en: bioRxiv, 2020
Editor: CSHL
DOI: 10.1101/2020.04.13.038810

Conference proceedings (1)

Molecularly Imprinted Polymers for characterization of rare phosphorylation events

Autores: Arribas Díez, Ignacio
Publicado en: Arribas Díez , I , Anil Incel & Chau Huynh 2019 , ' Molecularly Imprinted Polymers for characterization of rare phosphorylation events ' , Proteomics in Cell Biology and Disease Mechanisms , Heidelberg , Germany , 07/03/2019 - 09/03/2019 ., Edición 1, 2019
Editor: EMBL

Derechos de propiedad intelectual

Patent (1)

MOLECULARLY IMPRINTED POLYMERS

Número de solicitud/publicación: 16 793088
Fecha: 2016-05-09
Solicitante(s): BUNDESANSTALT FUER MATERIALFORSCHUNG UND -PRUEFUNG