Smart capture phases for proteomics, glycomics and biomarker assays

Informazioni relative al progetto

BioCapture

ID dell’accordo di sovvenzione: 722171

DOI

10.3030/722171

Progetto chiuso

Data della firma CE 31 Agosto 2016

Data di avvio 1 Novembre 2016

Data di completamento 31 Ottobre 2021

Finanziato da

• EXCELLENT SCIENCE - Marie Skłodowska-Curie Actions

Costo totale

€ 2 982 872,07

Contributo UE

€ 2 982 872,07

Coordinato da

MALMO UNIVERSITET
Sweden

CORDIS fornisce collegamenti ai risultati finali pubblici e alle pubblicazioni dei progetti ORIZZONTE.

I link ai risultati e alle pubblicazioni dei progetti del 7° PQ, così come i link ad alcuni tipi di risultati specifici come dataset e software, sono recuperati dinamicamente da .OpenAIRE .

Risultati finali

Documents, reports (1)

Project vacancies advertised

Websites, patent fillings, videos etc. (3)

Project website published and accessible
Produce a minimum of two press releases
Produce a project poster and a presentation

Pubblicazioni

Peer reviewed articles (23)

Magnetic Synthetic Receptors for Selective Clean-Up in Protein Biomarker Quantification

Autori: Nicholas McKitterick, Frida Braathen, Magdalena A. Switnicka-Plak, Peter A. G. Cormack, Léon Reubsaet, Trine Grønhaug Halvorsen
Pubblicato in: Journal of Proteome Research, Numero 19/8, 2020, Pagina/e 3573-3582, ISSN 1535-3893
Editore: American Chemical Society
DOI: 10.1021/acs.jproteome.0c00258

Oxoanion Imprinting Combining Cationic and Urea Binding Groups: A Potent Glyphosate Adsorber

Autori: Sudhirkumar Shinde, Mona Mansour, Liliia Mavliutova, Anil Incel, Celina Wierzbicka, Hussein I. Abdel-Shafy, and Börje Sellergren
Pubblicato in: ACS Omega, 2021, ISSN 2470-1343
Editore: American Chemical Society
DOI: 10.1021/acsomega.1c05079

Urea-based imprinted polymer hosts with switchable anion preference

Autori: Sudhirkumar Shinde; Sudhirkumar Shinde; Anıl İncel; Mona Mansour; Gustaf D. Olsson; Ian A. Nicholls; Cem Esen; Javier Urraca; Börje Sellergren; Börje Sellergren
Pubblicato in: Journal of the American Chemical Society, Numero 142(26), 2020, ISSN 0002-7863
Editore: American Chemical Society
DOI: 10.1021/jacs.0c00707

Improved Solvothermal Synthesis of γ-Fe2O3 Magnetic Nanoparticles for SiO2 Coating

Autori: Rashmi Mahajan; Subramanian Suriyanarayanan; Ian A. Nicholls
Pubblicato in: Nanomaterials, Numero 11(8), 2021, ISSN 2079-4991
Editore: MDPI
DOI: 10.3390/nano11081889

Affinity capture in bottom-up protein analysis –overview of current status of proteolytic peptide capture using antibodies and molecularly imprinted polymers

Autori: Halvorsen TG, McKitterick N, Kish, M.; Reubsaet, L.
Pubblicato in: Anal. Chim. Acta, Numero 1182, 2021, ISSN 0003-2670
Editore: Elsevier BV
DOI: 10.1016/j.aca.2021.338714

The glycosylation design space for recombinant lysosomal replacement enzymes produced in CHO cells.

Autori: Weihua Tian, Zilu Ye, Shengjun Wang, Morten Alder Schulz, Julie Van Coillie, Lingbo Sun, Yen-Hsi Chen, Yoshiki Narimatsu, Lars Hansen, Claus Kristensen, Ulla Mandel, Eric Paul Bennett, Siamak Jabbarzadeh-Tabrizi, Raphael Schiffmann, Jin-Song Shen, Sergey Y. Vakhrushev, Henrik Clausen & Zhang Yang
Pubblicato in: Nature Communications, Numero 10, 2019, ISSN 2041-1723
Editore: Nature Publishing Group
DOI: 10.1038/s41467-019-09809-3

Strategies for Molecular Imprinting and the Evolution of MIP Nanoparticles as Plastic Antibodies—Synthesis and Applications

Autori: Refaat, D.; Aggour, M. G.; Farghali, A. A.; Mahajan, R.; Wiklander, J. G.; Nicholls, I. A.; Piletsky, S. A.
Pubblicato in: Int. Journal of Molecular Sciences, Numero 20(24), 2019, ISSN 1422-0067
Editore: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms20246304

Selective Enrichment of Histidine Phosphorylated Peptides Using Molecularly Imprinted Polymers

Autori: Anıl Incel, Ignacio Arribas Díez, Celina Wierzbicka, Katarzyna Gajoch, Ole N. Jensen, Börje Sellergren
Pubblicato in: Analytical Chemistry, 2021, ISSN 0003-2700
Editore: American Chemical Society
DOI: 10.1021/acs.analchem.0c04474

An Atlas of Human Glycosylation Pathways Enables Display of the Human Glycome by Gene Engineered Cells

Autori: Narimatsu, Yoshiki; Joshi, Hiren J.; Nason, Rebecca; Van Coillie, Julie; Karlsson, Richard; Sun, Lingbo; Ye, Zilu; Chen, Yen-Hsi; Schjoldager, Katrine T.; Steentoft, Catharina; Furukawa, Sanae; Bensing, Barbara A.; Sullam, Paul M.; Thompson, Andrew J.; Paulson, James C.; Büll, Christian; Adema, Gosse J.; Mandel, Ulla; Hansen, Lars; Bennett, Eric Paul; Varki, Ajit; Vakhrushev, Sergey Y.; Yang, Zha
Pubblicato in: Mol Cell, Numero 75(2), 2019, ISSN 1097-2765
Editore: Cell Press
DOI: 10.1016/j.molcel.2019.05.017

Zirconium(IV)-IMAC Revisited: Improved Performance and Phosphoproteome Coverage by Magnetic Microparticles for Phosphopeptide Affinity Enrichment

Autori: Ignacio Arribas Diez, Ireshyn Govender, Previn Naicker, Stoyan Stoychev, Justin Jordaan, Ole N. Jensen
Pubblicato in: J. Proteome Research, Numero 20, 2021, ISSN 1535-3893
Editore: American Chemical Society
DOI: 10.1021/acs.jproteome.0c00508

The Use of Computational Methods for the Development of Molecularly Imprinted Polymers

Autori: Ian A. Nicholls; Kerstin Golker; Gustaf D. Olsson; Subramanian Suriyanarayanan; Jesper G. Wiklander
Pubblicato in: Polymers, Vol 13, Iss 2841, p 2841 (2021), Numero 1, 2021, ISSN 2073-4360
Editore: MDPI
DOI: 10.3390/polym13172841

Exploring Regulation of Protein O-Glycosylation in Isogenic Human HEK293 Cells by Differential O-Glycoproteomics

Autori: Narimatsu Y, Joshi HJ, Schjoldager KT, Hintze J, Halim A, Steentoft C, Nason R, Mandel U, Bennett EP, Clausen H, Vakhrushev SY
Pubblicato in: Mol. Cell Proteomics, Numero 18(7), 2019, ISSN 1535-9476
Editore: American Society for Biochemistry and Molecular Biology Inc.
DOI: 10.1074/mcp.ra118.001121

High salt compatible oxyanion receptors by dual ion imprinting

Autori: Sudhirkumar Shinde; Mona Mansour; Anıl İncel; Liliia Mavliutova; Celina Wierzbicka; Börje Sellergren
Pubblicato in: Chemical Science, Numero 11 (16), 2020, ISSN 2041-6520
Editore: Royal Society of Chemistry
DOI: 10.1039/c9sc06508c

Combinatorial design of a sialic acid imprinted binding site exploring a dual ion receptor approach

Autori: Liliia Mavliutova; Elena Verduci; Börje Sellergren
Pubblicato in: RSC Advances, Numero 11, 2021, Pagina/e 34329-34337, ISSN 2046-2069
Editore: Royal Society of Chemistry
DOI: 10.1039/d1ra06962d

Mesoporous polymeric microspheres with high affinity for phosphorylated biomolecules

Autori: Sudhirkumar Shinde, Jayashree Selvalatchmanan, Anil Incel, Maedeh Akhoundian, Anne K. Bendt, Federico Torta
Pubblicato in: New Journal of Chemistry, Numero 42/11, 2018, Pagina/e 8603-8608, ISSN 1144-0546
Editore: Royal Society of Chemistry
DOI: 10.1039/C8NJ01114A

Highly efficient synthesis and assay of protein imprinted nanogels using magnetic templates

Autori: Rashmi Mahajan, Mona Rouhi, Sudhirkumar Shinde, Thomas Bedwell, Anil Incel, Liliia Mavliutova, Sergey Piletsky, Ian Nicholls, Börje K-E Sellergren
Pubblicato in: Angewandte Chemie International Edition, Numero 58 (3), 2018, ISSN 1433-7851
Editore: John Wiley & Sons Ltd.
DOI: 10.1002/anie.201805772

Selective detection of phospholipids using molecularly imprinted fluorescent sensory core-shell particles.

Autori: Qianjin Li, Sudhirkumar Shinde, Giuliana Grasso, Antonio Caroli, Rahma Abouhany, Michele Lanzillotta, Guoqing Pan, Wei Wan, Knut Rurack & Börje Sellergren
Pubblicato in: Nature Scientific Report, Numero 10, 2020, ISSN 2045-2322
Editore: Nature Publishing Group
DOI: 10.1038/s41598-020-66802-3

Facilitating serum determination of neuron specific enolase at clinically relevant levels by coupling on-line molecularly imprinted solid-phase extraction to LC-MS/MS

Autori: Nicholas McKitterick, Tugrul Cem Bicak, Peter A. G. Cormack, Léon Reubsaet, and Trine Grønhaug Halvorsen
Pubblicato in: Anal. Chim. Acta, Numero 1140, 2020, ISSN 0003-2670
Editore: Elsevier BV
DOI: 10.1016/j.aca.2020.10.022

Engineering mammalian cells to produce plant-specific N-glycosylation on proteins

Autori: Joachim Steen Larsen; Richard Karlsson; Weihua Tian; Morten Alder Schulz; Annemarie Matthes; Henrik Clausen; Bent Larsen Petersen; Zhang Yang
Pubblicato in: Glycobiology, Numero 1, 2020, ISSN 0959-6658
Editore: Oxford University Press
DOI: 10.1093/glycob/cwaa009

Probing the binding specificities of human Siglecs by cell-based glycan arrays

Autori: Christian Büll; Rebecca Nason; Lingbo Sun; Julie Van Coillie; Daniel Madriz Sørensen; Sam J. Moons; Zhang Yang; Steven Arbitman; Steve M. Fernandes; Sanae Furukawa; Ryan McBride; Corwin M. Nycholat; Gosse J. Adema; James C. Paulson; Ronald L. Schnaar; Thomas J. Boltje; Henrik Clausen; Yoshiki Narimatsu
Pubblicato in: Proc Natl Acad Sci U S A, Numero 118(17), 2021, ISSN 0027-8424
Editore: National Academy of Sciences
DOI: 10.1073/pnas.2026102118

On-line duplex molecularly imprinted solid-phase extraction for analysis of low-abundant biomarkers in human serum by liquid chromatography-tandem mass spectrometry

Autori: McKitterick, N.; Bicak, T. C.; Switnicka-Plak, M. A.; Cormack, P. A. G.; Reubsaet, L.; Halvorsen, T. G.
Pubblicato in: J. Chromatogr. A, Numero 1655, 2021, ISSN 0021-9673
Editore: Elsevier BV
DOI: 10.1016/j.chroma.2021.462490

Discrimination between sialic acid linkage modes using sialyllactose-imprinted polymers

Autori: Liliia Mavliutova; Bruna Munoz Aldeguer; Jesper Wiklander; Celina Wierzbicka; Chau Minh Huynh; Ian A. Nicholls; Knut Irgum; Börje Sellergren
Pubblicato in: RSC Advances, Numero 11, 2021, ISSN 2046-2069
Editore: Royal Society of Chemistry
DOI: 10.1039/d1ra02274a

Display of the human mucinome with defined O-glycans by gene engineered cells

Autori: Nason R, Büll C, KonstantinidiA, SunL, Ye Z, HalimA, Wenjuan Du, SørensenD, FurukawaS, MandelU, JoshiH, DworkinL, HansenL, DavidL, IversonR, BensingB, SullamP, VarkiA, de VrieE, de HaanC, VincentelliR, HenrissatB, VakhrushevS, ClausenH, Narimatsu
Pubblicato in: Nature Communications, Numero 12, 2021, ISSN 2041-1723
Editore: Nature Publishing Group
DOI: 10.1038/s41467-021-24366-4

Thesis and dissertations (4)

Molecularly Imprinted Polymers for the Analysis of Small Cell Lung Cancer Biomarkers by Liquid Chromatography-Tandem Mass Spectrometry

Autori: Nicholas McKitterick
Pubblicato in: Numero 15017710, 2021, ISSN 1501-7710
Editore: University of Oslo

Moleculary imprinted micro- and nanoparticles for cancer associated glycan motifs

Autori: Liliia Mavliutova
Pubblicato in: 2021, ISBN 9789178772056
Editore: Malmö University

Molecularly imprinted polymers for small cell lung cancer diagnosis

Autori: Bicak,Tugrul Cem
Pubblicato in: 2021
Editore: University of Strathclyde
DOI: 10.48730/0eyc-aj60

Amino acid sequence and side chain specific synthetic receptors targeting protein phosphorylation

Autori: Anil Incel
Pubblicato in: Malmö University, 2021, ISBN 9789178772070
Editore: Malmö University
DOI: 10.24834/isbn.9789178772087

Other (2)

Plastantikroppar som hittar cancerceller

Autori: EVA BARTONEK ROXÅ
Pubblicato in: Vetenskap och Hälsa, 2019
Editore: Lund University

Zirconium(IV)-IMAC for phosphopeptide enrichment in phosphoproteomics

Autori: IA Diez; Ireshyn S Govender; Previn Naicker; Stoyan Stoychev; Justin Jordaan; Ole Noerregaard Jensen
Pubblicato in: bioRxiv, 2020
Editore: CSHL
DOI: 10.1101/2020.04.13.038810

Conference proceedings (1)

Molecularly Imprinted Polymers for characterization of rare phosphorylation events

Autori: Arribas Díez, Ignacio
Pubblicato in: Arribas Díez , I , Anil Incel & Chau Huynh 2019 , ' Molecularly Imprinted Polymers for characterization of rare phosphorylation events ' , Proteomics in Cell Biology and Disease Mechanisms , Heidelberg , Germany , 07/03/2019 - 09/03/2019 ., Numero 1, 2019
Editore: EMBL

Diritti di proprietà intellettuale

Patent (1)

MOLECULARLY IMPRINTED POLYMERS

Numero candidatura/pubblicazione: 16 793088
Data: 2016-05-09
Candidato/i: BUNDESANSTALT FUER MATERIALFORSCHUNG UND -PRUEFUNG