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Great ape organoids to reconstruct uniquely human development

Pubblicazioni

CSS: cluster similarity spectrum integration of single-cell genomics data

Autori: Zhisong He, Agnieska Brazovskaja, Sebastian Ebert, J. Gray Camp, Barbara Treutlein
Pubblicato in: Genome Biology, Issue 21/1, 2020, Page(s) 224-244, ISSN 1474-760X
Editore: Springer Nature
DOI: 10.1186/s13059-020-02147-4

Resolving organoid brain region identities by mapping single-cell genomic data to reference atlases

Autori: Jonas Simon Fleck, Fátima Sanchís-Calleja, Zhisong He, Malgorzata Santel, Michael James Boyle, J. Gray Camp, Barbara Treutlein
Pubblicato in: Cell Stem Cell, Issue 28, 2021, Page(s) 1-12, ISSN 1934-5909
Editore: Cell Press
DOI: 10.1016/j.stem.2021.02.015

Charting human development using a multi-endodermal organ atlas and organoid models

Autori: Qianhui Yu, Umut Kilik, Emily M. Holloway, Yu-Hwai Tsai, Christoph Harmel, Angeline Wu, Joshua H. Wu, Michael Czerwinski, Charlie J. Childs, Zhisong He, Meghan M. Capeling, Sha Huang, Ian A. Glass, Peter D.R. Higgins, Barbara Treutlein, Jason R. Spence, J. Gray Camp
Pubblicato in: Cell, Issue 184, 2021, Page(s) 1-18, ISSN 0092-8674
Editore: Cell Press
DOI: 10.1016/j.cell.2021.04.028

Chromatin regulatory dynamics of early human small intestinal development using a directed differentiation model

Autori: Yu-Han Hung, Sha Huang, Michael K Dame, Qianhui Yu, Qing C Yu, Yi A Zeng, J Gray Camp, Jason R Spence, Praveen Sethupathy
Pubblicato in: Nucleic Acids Research, Issue 49/2, 2021, Page(s) 726-744, ISSN 0305-1048
Editore: Oxford University Press
DOI: 10.1093/nar/gkaa1204

Resolving Neurodevelopmental and Vision Disorders Using Organoid Single-Cell Multi-omics

Autori: Giovanna Brancati, Barbara Treutlein, J. Gray Camp
Pubblicato in: Neuron, Issue 107/6, 2020, Page(s) 1000-1013, ISSN 0896-6273
Editore: Cell Press
DOI: 10.1016/j.neuron.2020.09.001

Lineage recording in human cerebral organoids

Autori: Zhisong He, Ashley Maynard, Akanksha Jain, Tobias Gerber, Rebecca Petri, Hsiu-Chuan Lin, Malgorzata Santel, Kevin Ly, Jean-Samuel Dupré, Leila Sidow, Fatima Sanchis Calleja, Sophie M. J. Jansen, Stephan Riesenberg, J. Gray Camp, Barbara Treutlein
Pubblicato in: Nature Methods, 2021, Page(s) 90-99, ISSN 1548-7091
Editore: Nature Publishing Group
DOI: 10.1038/s41592-021-01344-8

Organoid single-cell genomic atlas uncovers human-specific features of brain development

Autori: Sabina Kanton, Michael James Boyle, Zhisong He, Malgorzata Santel, Anne Weigert, Fátima Sanchís-Calleja, Patricia Guijarro, Leila Sidow, Jonas Simon Fleck, Dingding Han, Zhengzong Qian, Michael Heide, Wieland B. Huttner, Philipp Khaitovich, Svante Pääbo, Barbara Treutlein, J. Gray Camp
Pubblicato in: Nature, Issue 574/7778, 2019, Page(s) 418-422, ISSN 0028-0836
Editore: Nature Publishing Group
DOI: 10.1038/s41586-019-1654-9

Mapping human cell phenotypes to genotypes with single-cell genomics

Autori: J. Gray Camp, Randall Platt, Barbara Treutlein
Pubblicato in: Science, Issue 365/6460, 2019, Page(s) 1401-1405, ISSN 0036-8075
Editore: American Association for the Advancement of Science
DOI: 10.1126/science.aax6648

Single-cell-resolution transcriptome map of human, chimpanzee, bonobo, and macaque brains

Autori: Ekaterina Khrameeva, Ilia Kurochkin, Dingding Han, Patricia Guijarro, Sabina Kanton, Malgorzata Santel, Zhengzong Qian, Shen Rong, Pavel Mazin, Marat Sabirov, Matvei Bulat, Olga Efimova, Anna Tkachev, Song Guo, Chet C. Sherwood, J. Gray Camp, Svante Pääbo, Barbara Treutlein, Philipp Khaitovich
Pubblicato in: Genome Research, Issue 30/5, 2020, Page(s) 776-789, ISSN 1088-9051
Editore: Cold Spring Harbor Laboratory Press
DOI: 10.1101/gr.256958.119

Human Stem Cell Resources Are an Inroad to Neandertal DNA Functions

Autori: Michael Dannemann, Zhisong He, Christian Heide, Benjamin Vernot, Leila Sidow, Sabina Kanton, Anne Weigert, Barbara Treutlein, Svante Pääbo, Janet Kelso, J. Gray Camp
Pubblicato in: Stem Cell Reports, Issue 15/1, 2020, Page(s) 214-225, ISSN 2213-6711
Editore: Cell Press
DOI: 10.1016/j.stemcr.2020.05.018

Organoid single-cell genomic atlas uncovers human-specific features of brain development

Autori: Sabina Kanton, Michael James Boyle, Zhisong He, Malgorzata Santel, Anne Weigert, Fátima Sanchís-Calleja, Patricia Guijarro, Leila Sidow, Jonas Simon Fleck, Dingding Han, Zhengzong Qian, Michael Heide, Wieland B. Huttner, Philipp Khaitovich, Svante Pääbo, Barbara Treutlein, J. Gray Camp
Pubblicato in: Nature, Issue 574/7778, 2019, Page(s) 418-422, ISSN 0028-0836
Editore: Nature Publishing Group
DOI: 10.1038/s41586-019-1654-9

Spatial transcriptomic and single-nucleus analysis reveals heterogeneity in a gigantic single-celled syncytium

Autori: Nico Schramma; Cristina Loureiro; Tobias Gerber; Siyu Chen; Akanksha Jain; Anne Weber; Anne Weigert; Malgorzata Santel; Karen Alim; Barbara Treutlein; J Gray Camp
Pubblicato in: eLife, Issue 1, 2022, ISSN 2050-084X
Editore: eLife Sciences Publications
DOI: 10.3929/ethz-b-000535011

Single-cell genomic analysis of human cerebral organoids

Autori: Sabina Kanton, Barbara Treutlein, J. Gray Camp
Pubblicato in: Human Pluripotent Stem Cell Derived Organoid Models, Issue 159, 2020, Page(s) 229-256, ISBN 9780128215319
Editore: Elsevier
DOI: 10.1016/bs.mcb.2020.03.013

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