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Microbial Communities in Biomedical and Environmental Areas, and Systems Biology

Deliverables

Organized Advanced course in metagenomics and OMICs data integration

Organized Advanced course in metagenomics and OMICs data integration

Dissemination and Communication strategy document prepared

Dissemination and Communication strategy document prepared

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Publications

Giardia intestinalis mitosomes undergo synchronized fission but not fusion and are constitutively associated with the endoplasmic reticulum

Author(s): Luboš Voleman, Vladimíra Najdrová, Ásgeir Ástvaldsson, Pavla Tůmová, Elin Einarsson, Zdeněk Švindrych, Guy M. Hagen, Jan Tachezy, Staffan G. Svärd, Pavel Doležal
Published in: BMC Biology, Issue 15/1, 2017, ISSN 1741-7007
DOI: 10.1186/s12915-017-0361-y

High-Throughput Analysis of Human Cytomegalovirus Genome Diversity Highlights the Widespread Occurrence of Gene-Disrupting Mutations and Pervasive Recombination

Author(s): Steven Sijmons, Kim Thys, Mirabeau Mbong Ngwese, Ellen Van Damme, Jan Dvorak, Marnix Van Loock, Guangdi Li, Ruth Tachezy, Laurent Busson, Jeroen Aerssens, Marc Van Ranst, Piet Maes
Published in: Journal of Virology, Issue 89/15, 2015, Page(s) 7673-7695, ISSN 0022-538X
DOI: 10.1128/JVI.00578-15

A Novel Protein, Ubiquitous in Marine Phytoplankton, Concentrates Iron at the Cell Surface and Facilitates Uptake

Author(s): Joe Morrissey, Robert Sutak, Javier Paz-Yepes, Atsuko Tanaka, Ahmed Moustafa, Alaguraj Veluchamy, Yann Thomas, Hugo Botebol, François-Yves Bouget, Jeffrey B. McQuaid, Leila Tirichine, Andrew E. Allen, Emmanuel Lesuisse, Chris Bowler
Published in: Current Biology, Issue 25/3, 2015, Page(s) 364-371, ISSN 0960-9822
DOI: 10.1016/j.cub.2014.12.004

A Eukaryote without a Mitochondrial Organelle

Author(s): Anna Karnkowska, Vojtěch Vacek, Zuzana Zubáčová, Sebastian C. Treitli, Romana Petrželková, Laura Eme, Lukáš Novák, Vojtěch Žárský, Lael D. Barlow, Emily K. Herman, Petr Soukal, Miluše Hroudová, Pavel Doležal, Courtney W. Stairs, Andrew J. Roger, Marek Eliáš, Joel B. Dacks, Čestmír Vlček, Vladimír Hampl
Published in: Current Biology, Issue 26/10, 2016, Page(s) 1274-1284, ISSN 0960-9822
DOI: 10.1016/j.cub.2016.03.053

Understanding the potential of hepatitis C virus internal ribosome entry site domains to modulate translation initiation via their structure and function

Author(s): Anas Khawaja, Vaclav Vopalensky, Martin Pospisek
Published in: Wiley Interdisciplinary Reviews: RNA, Issue 6/2, 2015, Page(s) 211-224, ISSN 1757-7004
DOI: 10.1002/wrna.1268

Lateral Gene Transfer and Gene Duplication Played a Key Role in the Evolution of Mastigamoeba balamuthi Hydrogenosomes

Author(s): Eva Nývltová, Courtney W. Stairs, Ivan Hrdý, Jakub Rídl, Jan Mach, Jan Pačes, Andrew J. Roger, Jan Tachezy
Published in: Molecular Biology and Evolution, Issue 32/4, 2015, Page(s) 1039-1055, ISSN 0737-4038
DOI: 10.1093/molbev/msu408

Horizontal transfer of whole mitochondria restores tumorigenic potential in mitochondrial DNA-deficient cancer cells

Author(s): Lan-Feng Dong, Jaromira Kovarova, Martina Bajzikova, Ayenachew Bezawork-Geleta, David Svec, Berwini Endaya, Karishma Sachaphibulkij, Ana R Coelho, Natasa Sebkova, Anna Ruzickova, An S Tan, Katarina Kluckova, Kristyna Judasova, Katerina Zamecnikova, Zuzana Rychtarcikova, Vinod Gopalan, Ladislav Andera, Margarita Sobol, Bing Yan, Bijay Pattnaik, Naveen Bhatraju, Jaroslav Truksa, Pavel Stopka, Pavel
Published in: eLife, Issue 6, 2017, ISSN 2050-084X
DOI: 10.7554/eLife.22187

Multilevel regulation of an α-arrestin by glucose depletion controls hexose transporter endocytosis

Author(s): Junie Hovsepian, Quentin Defenouillère, Véronique Albanèse, Libuše Váchová, Camille Garcia, Zdena Palková, Sébastien Léon
Published in: The Journal of Cell Biology, Issue 216/6, 2017, Page(s) 1811-1831, ISSN 0021-9525
DOI: 10.1083/jcb.201610094

Yeast cell differentiation: Lessons from pathogenic and non-pathogenic yeasts


Published in: ISSN 1084-9521
DOI: 10.1016/j.semcdb.2016.04.006

Cyc8p and Tup1p transcription regulators antagonistically regulate Flo11p expression and complexity of yeast colony biofilms

Author(s): Phu Van Nguyen, Otakar Hlaváček, Jana Maršíková, Libuše Váchová, Zdena Palková
Published in: PLOS Genetics, Issue 14/7, 2018, Page(s) e1007495, ISSN 1553-7404
DOI: 10.1371/journal.pgen.1007495

Messenger RNAs of Yeast Virus-Like Elements Contain Non-templated 5′ Poly(A) Leaders, and Their Expression Is Independent of eIF4E and Pab1

Author(s): Václav Vopálenský, Michal Sýkora, Tomáš Mašek, Martin Pospíšek
Published in: Frontiers in Microbiology, Issue 10, 2019, ISSN 1664-302X
DOI: 10.3389/fmicb.2019.02366

Copper and iron metabolism in Ostreococcus tauri – the role of phytotransferrin, plastocyanin and a chloroplast copper-transporting ATPase

Author(s): Ivo Florin Scheiber, Jana Pilátová, Ronald Malych, Eva Kotabova, Matyáš Krijt, Daniel Vyoral, Jan Mach, Thibaut Léger, Jean-Michel Camadro, Ondřej Prášil, Emmanuel Lesuisse, Robert Sutak
Published in: Metallomics, Issue 11/10, 2019, Page(s) 1657-1666, ISSN 1756-5901
DOI: 10.1039/c9mt00078j

Anaerobic peroxisomes in Mastigamoeba balamuthi

Author(s): Tien Le, Vojtěch Žárský, Eva Nývltová, Petr Rada, Karel Harant, Marie Vancová, Zdeněk Verner, Ivan Hrdý, Jan Tachezy
Published in: Proceedings of the National Academy of Sciences, 2019, Page(s) 201909755, ISSN 0027-8424
DOI: 10.1073/pnas.1909755117