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A DNA NANOtechology toolkit for artificial CELL design

Publications

Amphiphilic DNA nanostructures for bottom-up synthetic biology.

Author(s): Roger Rubio-Sánchez; Roger Rubio-Sánchez; Giacomo Fabrini; Pietro Cicuta; Lorenzo Di Michele; Lorenzo Di Michele
Published in: ChemComm, 2021, ISSN 1359-7345
Publisher: Royal Society of Chemistry
DOI: 10.1039/d1cc04311k

Cation-responsive and photocleavable hydrogels from non-canonical amphiphilic DNA nanostructures

Author(s): Giacomo Fabrini; Aisling Minard; Ryan A. Brady; Marco Di Antonio; Lorenzo Di Michele
Published in: Nano Letters, 2022, ISSN 1530-6984
Publisher: American Chemical Society
DOI: 10.1021/acs.nanolett.1c03314

Detecting Nanoscale Distribution of Protein Pairs by Proximity-Dependent Super-resolution Microscopy.

Author(s): Alexander H. Clowsley; William T. Kaufhold; Tobias Lutz; Anna Meletiou; Lorenzo Di Michele; Christian Soeller
Published in: Journal of the American Chemical Society, 2020, ISSN 0002-7863
Publisher: American Chemical Society
DOI: 10.1101/591081

Interplay of the mechanical and structural properties of DNA nanostructures determines their electrostatic interactions with lipid membranes

Author(s): Diana Morzy; Cem Tekin; Vincenzo Caroprese; Roger Rubio-Sánchez; Lorenzo Di Michele; Maartje M. C. Bastings
Published in: Nanoscale, 2023, ISSN 2040-3372
Publisher: Royal Society of Chemistry
DOI: 10.1039/d2nr05368c

Thermally Driven Membrane Phase Transitions Enable Content Reshuffling in Primitive Cells.

Author(s): Roger Rubio-Sánchez; Derek K. O’Flaherty; Anna Wang; Francesca Coscia; Gianluca Petris; Lorenzo Di Michele; Lorenzo Di Michele; Pietro Cicuta; Claudia Bonfio; Claudia Bonfio
Published in: Journal of the American Chemical Society, Issue 5, 2021, ISSN 0002-7863
Publisher: American Chemical Society
DOI: 10.1021/jacs.1c06595

Cations Regulate Membrane Attachment and Functionality of DNA Nanostructures

Author(s): Diana Morzy, Roger Rubio-Sánchez, Himanshu Joshi, Aleksei Aksimentiev, Lorenzo Di Michele, Ulrich F. Keyser
Published in: Journal of the American Chemical Society, Issue 143/19, 2021, Page(s) 7358-7367, ISSN 0002-7863
Publisher: American Chemical Society
DOI: 10.1021/jacs.1c00166

Fast, multicolour optical sectioning over extended fields of view with patterned illumination and machine learning

Author(s): Ward, Edward N; McClelland, Rebecca M; Lamb, Jacob R; Rubio-Sánchez, Roger; Christensen, Charles N; Mazumder, Bismoy; Kapsiani, Sofia; Mascheroni, Luca; Di Michele, Lorenzo; Kaminski Schierle, Gabriele S; Kaminski, Clemens F
Published in: Biomedical Optics Express, Issue 3, 2024, ISSN 2156-7085
Publisher: The Optical Society
DOI: 10.1364/boe.510912

Modulating membrane fusion through the design of fusogenic DNA circuits and bilayer composition

Author(s): Miguel Paez-Perez; I. Alasdair Russell; Pietro Cicuta; Lorenzo Di Michele
Published in: Soft Matter, 2022, ISSN 1744-683X
Publisher: Royal Society of Chemistry
DOI: 10.1039/d2sm00863g

Probing the Mechanical Properties of DNA Nanostructures with Metadynamics

Author(s): Will T. Kaufhold, Wolfgang Pfeifer, Carlos E. Castro, and Lorenzo Di Michele
Published in: ACS Nano, 2022, ISSN 1936-0851
Publisher: American Chemical Society
DOI: 10.1021/acsnano.1c08999

Adaptable DNA interactions regulate surface triggered self assembly

Author(s): Roberta Lanfranco, Pritam Kumar Jana, Gilles Bruylants, Pietro Cicuta, Bortolo Matteo Mognetti, Lorenzo Di Michele
Published in: Nanoscale, Issue 12/36, 2020, Page(s) 18616-18620, ISSN 2040-3364
Publisher: Royal Society of Chemistry
DOI: 10.1039/d0nr04461j

Reaction-diffusion patterning of DNA-based artificial cells

Author(s): Adrian Leathers; Michal Walczak; Ryan A. Brady; Assala Al Samad; Jurij Kotar; Michael J. Booth; Pietro Cicuta; Lorenzo Di Michele
Published in: Journal of the American Chemical Society, 2022, ISSN 0002-7863
Publisher: American Chemical Society
DOI: 10.1021/jacs.2c06140

DNA-Based Optical Quantification of Ion Transport across Giant Vesicles

Author(s): Marcus Fletcher; Jinbo Zhu; Roger Rubio-Sánchez; Sarah E Sandler; Kareem Al Nahas; Lorenzo Di Michele; Ulrich F Keyser; Ran Tivony
Published in: ACS Nano, 2023, ISSN 1936-0851
Publisher: American Chemical Society
DOI: 10.1021/acsnano.2c07496

DNA-Origami Line-Actants Control Domain Organization and Fission in Synthetic Membranes

Author(s): Roger Rubio-Sánchez; Bortolo Matteo Mognetti; Pietro Cicuta; Lorenzo Di Michele
Published in: Journal of the American Chemical Society, 2022, ISSN 0002-7863
Publisher: American Chemical Society
DOI: 10.1021/jacs.3c01493

A Modular, Dynamic, DNA-Based Platform for Regulating Cargo Distribution and Transport between Lipid Domains

Author(s): Roger Rubio-Sánchez, Simone Eizagirre Barker, Michal Walczak, Pietro Cicuta, Lorenzo Di Michele
Published in: Nano Letters, Issue 21/7, 2021, Page(s) 2800-2808, ISSN 1530-6984
Publisher: American Chemical Society
DOI: 10.1021/acs.nanolett.0c04867

A Synthetic Signaling Network Imitating the Actionof Immune Cells in Response to Bacterial Metabolism

Author(s): Michal Walczak, Leonardo Mancini, Jiayi Xu, Federica Raguseo, Jurij Kotar, Pietro Cicuta,and Lorenzo Di Michele
Published in: Advanced Materials, 2023, ISSN 1521-4095
Publisher: Wiley
DOI: 10.1002/adma.202301562

Influence of hydrophobic moieties on the crystallization of amphiphilic DNA nanostructures

Author(s): Jurij Kotar; Adrian Leathers; Michal Walczak; Ryan Brady; Lorenzo Di Michele
Published in: The Journal of Chemical Physics, 2023, ISSN 0021-9606
Publisher: American Institute of Physics
DOI: 10.1063/5.0132484

Repeat DNA-PAINT suppresses background and non-specific signals in optical nanoscopy

Author(s): Alexander H. Clowsley, William T. Kaufhold, Tobias Lutz, Anna Meletiou, Lorenzo Di Michele, Christian Soeller
Published in: Nature Communications, Issue 12/1, 2021, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-020-20686-z

DNA-assisted selective electrofusion (DASE) of <i>Escherichia coli</i> and giant lipid vesicles

Author(s): Pietro Cicuta; Lorenzo Di Michele; Sho Takamori; Shoji Takeuchi
Published in: Nanoscale, 2022, ISSN 2040-3372
Publisher: Royal Society of Chemistry
DOI: 10.1039/d2nr03105a

Responsive core-shell DNA particles trigger lipid-membrane disruption and bacteria entrapment

Author(s): Michal Walczak, Ryan A. Brady, Leonardo Mancini, Claudia Contini, Roger Rubio-Sánchez, William T. Kaufhold, Pietro Cicuta, Lorenzo Di Michele
Published in: Nature Communications, Issue 12/1, 2021, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-021-24989-7

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