COMBINING APPROACHES FOR PHOTOSYNTHETIC IMPROVEMENT TO ALLOW INCREASED SUSTAINABILITY IN EUROPEAN AGRICULTURE

Información del proyecto

CAPITALISE

Identificador del acuerdo de subvención: 862201

DOI

10.3030/862201

Proyecto cerrado

Fecha de la firma de la CE 15 Abril 2020

Fecha de inicio 1 Abril 2020

Fecha de finalización 30 Noviembre 2024

Financiado con arreglo a

• INDUSTRIAL LEADERSHIP - Leadership in enabling and industrial technologies – Biotechnology

Coste total

€ 8 917 645,75

Aportación de la UE

€ 8 573 894,75

Coordinado por

WAGENINGEN UNIVERSITY
Netherlands

CORDIS proporciona enlaces a los documentos públicos y las publicaciones de los proyectos de los programas marco HORIZONTE.

Los enlaces a los documentos y las publicaciones de los proyectos del Séptimo Programa Marco, así como los enlaces a algunos tipos de resultados específicos, como conjuntos de datos y «software», se obtienen dinámicamente de OpenAIRE .

Resultado final

Documents, reports (2)

Report on strategic agenda

A report will be produced, detailing the challenges, choices and impact of applying new innovations for increased photosynthetic efficiency. This will address general process recommendations for a reflective review of acceptance of new technologies.

European Strategic Research Agenda and Road Map to 2030

Road map and strategic research agenda available

Websites, patent fillings, videos etc. (1)

Project website operational

Project website online

Publicaciones

Peer reviewed articles (25)

Improving C3 photosynthesis by exploiting natural genetic variation: Hirschfeldia incana as a model species

Autores: Graham Taylor, Francesco Garassino, Mark G. M. Aarts, Jeremy Harbinson
Publicado en: Food and Energy Security, Edición 12, 2023, ISSN 2048-3694
Editor: John Wiley & Sons Ltd.
DOI: 10.1002/fes3.420

The genome sequence of Hirschfeldia incana, a new Brassicaceae model to improve photosynthetic light-use efficiency

Autores: Francesco Garassino, Raul Y. Wijfjes, Rene Boesten, Francisca Reyes Marquez, Frank F. M. Becker, Vittoria Clapero, Iris van den Hatert, Rens Holmer, M. Eric Schranz, Jeremy Harbinson, Dick de Ridder, Sandra Smit, Mark G. M. Aarts
Publicado en: The Plant Journal, Edición 112, 2022, Página(s) 1298-1315, ISSN 0960-7412
Editor: Blackwell Publishing Inc.
DOI: 10.1111/tpj.16005

Genetic loci mediating circadian clock output plasticity and crop productivity under barley domestication

Autores: Manas R. Prusty, Eyal Bdolach, Eiji Yamamoto, Lalit D. Tiwari, Roi Silberman, Adi Doron‐Faigenbaum, Jeffrey L. Neyhart, David Bonfil, Khalil Kashkush, Klaus Pillen, Kevin P. Smith, Eyal Fridman
Publicado en: New Phytologist, Edición 230/5, 2021, Página(s) 1787-1801, ISSN 0028-646X
Editor: Blackwell Publishing Inc.
DOI: 10.1111/nph.17284

Excised leaves show limited and species-specific effects on photosynthetic parameters across crop functional types

Autores: John N Ferguson, Tamanna Jithesh, Tracy Lawson, Johannes Kromdijk
Publicado en: Journal of Experimental Botany, Edición 74, 2023, Página(s) 6662-6676, ISSN 0022-0957
Editor: Oxford University Press
DOI: 10.1093/jxb/erad319

Topology of the redox network during induction of photosynthesis as revealed by time-resolved proteomics in tobacco

Autores: David Zimmer, Corné Swart, Alexander Graf, Stéphanie Arrivault, Michael Tillich, Sebastian Proost, Zoran Nikoloski, Mark Stitt, Ralph Bock, Timo Mühlhaus, Alix Boulouis
Publicado en: Science Advances, Edición 7, 2024, ISSN 2375-2548
Editor: AAAS
DOI: 10.1126/sciadv.abi8307

Proteomics and constraint-based modelling reveal enzyme kinetic properties of Chlamydomonas reinhardtii on a genome scale

Autores: Marius Arend, David Zimmer, Rudan Xu, Frederik Sommer, Timo Mühlhaus, Zoran Nikoloski
Publicado en: Nature Communications, Edición 14, 2023, ISSN 2041-1723
Editor: Nature Publishing Group
DOI: 10.1038/s41467-023-40498-1

<i>Solanum pennellii</i> (<scp>LA5240</scp>) backcross inbred lines (<scp>BILs</scp>) for high resolution mapping in tomato

Autores: Shai Torgeman, Tzili Pleban, Yael Goldberg, Paola Ferrante, Giuseppe Aprea, Giovanni Giuliano, Yoav Yichie, Josef Fisher, Itay Zemach, Amit Koch, Edan Rochsar, Matan Oved, Kfir Bandel, Dani Zamir
Publicado en: The Plant Journal, Edición 119, 2024, Página(s) 595-603, ISSN 0960-7412
Editor: Blackwell Publishing Inc.
DOI: 10.1111/tpj.16755

Epistatic QTLs for yield heterosis in tomato

Autores: Shai Torgeman, Dani Zamir
Publicado en: Proceedings of the National Academy of Sciences, Edición 120, 2023, ISSN 0027-8424
Editor: National Academy of Sciences
DOI: 10.1073/pnas.2205787119

Maximization of non-idle enzymes improves the coverage of the estimated maximal <i>in vivo</i> enzyme catalytic rates in <i>Escherichia coli</i>

Autores: Rudan Xu, Zahra Razaghi-Moghadam, Zoran Nikoloski
Publicado en: Bioinformatics, Edición 37, 2023, Página(s) 3848-3855, ISSN 1367-4803
Editor: Oxford University Press
DOI: 10.1093/bioinformatics/btab575

Transcriptomic response to nitrogen availability reveals signatures of adaptive plasticity during tetraploid wheat domestication

Autores: Alice Pieri, Romina Beleggia, Tania Gioia, Hao Tong, Valerio Di Vittori, Giulia Frascarelli, Elena Bitocchi, Laura Nanni, Elisa Bellucci, Fabio Fiorani, Nicola Pecchioni, Stefania Marzario, Concetta De Quattro, Antonina Rita Limongi, Pasquale De Vita, Marzia Rossato, Ulrich Schurr, Jacques L David, Zoran Nikoloski, Roberto Papa
Publicado en: The Plant Cell, Edición 36, 2024, Página(s) 3809-3823, ISSN 1040-4651
Editor: American Society of Plant Biologists
DOI: 10.1093/plcell/koae202

Relative flux trade-offs and optimization of metabolic network functionalities

Autores: Seirana Hashemi, Zahra Razaghi-Moghadam, Roosa A. E. Laitinen, Zoran Nikoloski
Publicado en: Computational and Structural Biotechnology Journal, Edición 20, 2022, Página(s) 3963-3971, ISSN 2001-0370
Editor: Elsevier
DOI: 10.1016/j.csbj.2022.07.038

Cytonuclear interactions modulate the plasticity of photosynthetic rhythmicity and growth in wild barley

Autores: Lalit Dev Tiwari, Eyal Bdolach, Manas Ranjan Prusty, Schewach Bodenheimer, Avital Be'ery, Adi Faigenboim‐Doron, Eiji Yamamoto, Klára Panzarová, Khalil Kashkush, Noam Shental, Eyal Fridman
Publicado en: Physiologia Plantarum, Edición 176, 2024, ISSN 0031-9317
Editor: Blackwell Publishing Inc.
DOI: 10.1111/ppl.14192

Maximizing multi-reaction dependencies provides more accurate and precise predictions of intracellular fluxes than the principle of parsimony

Autores: Seirana Hashemi, Zahra Razaghi-Moghadam, Zoran Nikoloski
Publicado en: PLOS Computational Biology, Edición 19, 2023, Página(s) e1011489, ISSN 1553-7358
Editor: PLOS
DOI: 10.1371/journal.pcbi.1011489

Combination of network and molecule structure accurately predicts competitive inhibitory interactions

Autores: Zahra Razaghi-Moghadam, Ewelina M. Sokolowska, Marcin A. Sowa, Aleksandra Skirycz, Zoran Nikoloski
Publicado en: Computational and Structural Biotechnology Journal, Edición 19, 2024, Página(s) 2170-2178, ISSN 2001-0370
Editor: CSB
DOI: 10.1016/j.csbj.2021.04.012

Regulation of Rubisco activity in crops

Autores: Joana Amaral, Ana K. M. Lobo, Elizabete Carmo‐Silva
Publicado en: New Phytologist, Edición 241, 2024, Página(s) 35-51, ISSN 0028-646X
Editor: Blackwell Publishing Inc.
DOI: 10.1111/nph.19369

Crops under past diversification and ongoing climate change: more than just selection of nuclear genes for flowering

Autores: Lalit Dev Tiwari, Ayelet Kurtz-Sohn, Eyal Bdolach, Eyal Fridman
Publicado en: Journal of Experimental Botany, Edición 74, 2023, Página(s) 5431-5440, ISSN 0022-0957
Editor: Oxford University Press
DOI: 10.1093/jxb/erad283

From data to knowledge – big data needs stewardship, a plant phenomics perspective

Autores: Daniel Arend; Dennis Psaroudakis; Junaid Altaf Memon; Elena Rey‐Mazón; Danuta Schüler; Jedrzej Jakub Szymanski; Uwe Scholz; Astrid Junker; Matthias Lange
Publicado en: The Plant Journal, Edición 09607412, 2022, Página(s) 335-347, ISSN 0960-7412
Editor: Blackwell Publishing Inc.
DOI: 10.1111/tpj.15804

Data integration across conditions improves turnover number estimates and metabolic predictions

Autores: Philipp Wendering, Marius Arend, Zahra Razaghi-Moghadam, Zoran Nikoloski
Publicado en: Nature Communications, Edición 14, 2023, Página(s) 1485, ISSN 2041-1723
Editor: Nature Publishing Group
DOI: 10.1038/s41467-023-37151-2

Improving plant productivity by re-tuning the regeneration of RuBP in the Calvin–Benson–Bassham cycle

Autores: Christine Raines
Publicado en: New Phytologist, 2022, Página(s) 236, ISSN 0028-646X
Editor: Blackwell Publishing Inc.
DOI: 10.1111/nph.18394

Genetic variation in photosynthesis: many variants make light work

Autores: Johannes Kromdijk, Alistair J McCormick
Publicado en: Journal of Experimental Botany, Edición 73, 2022, Página(s) 3053-3056, ISSN 0022-0957
Editor: Oxford University Press
DOI: 10.1093/jxb/erac129

Prediction of metabolite–protein interactions based on integration of machine learning and constraint-based modeling

Autores: Fayaz Soleymani Babadi, Zahra Razaghi-Moghadam, Fatemeh Zare-Mirakabad, Zoran Nikoloski
Publicado en: Bioinformatics Advances, Edición 3, 2023, ISSN 2635-0041
Editor: Oxford University Press
DOI: 10.1093/bioadv/vbad098

Perspectives on improving photosynthesis to increase crop yield

Autores: Roberta Croce, Elizabete Carmo-Silva, Young B Cho, Maria Ermakova, Jeremy Harbinson, Tracy Lawson, Alistair J McCormick, Krishna K Niyogi, Donald R Ort, Dhruv Patel-Tupper, Paolo Pesaresi, Christine Raines, Andreas P M Weber, Xin-Guang Zhu
Publicado en: The Plant Cell, Edición 36, 2024, Página(s) 3944-3973, ISSN 1040-4651
Editor: American Society of Plant Biologists
DOI: 10.1093/plcell/koae132

Genetics as a key to improving crop photosynthesis

Autores: Tom P.J.M Theeuwen; Louise L. Logie; Jeremy Harbinson; Mark G. M. Aarts
Publicado en: Journal of Experimental Botany, Volume 73, Edición 10, Edición 10, 2022, Página(s) 3122–3137, ISSN 0022-0957
Editor: Oxford University Press
DOI: 10.1093/jxb/erac076

Breeding by intervening: Exploring the role of associations and deliberation in consumer acceptance of different breeding techniques

Autores: Paul Nales, Arnout R.H. Fischer
Publicado en: Public Understanding of Science, Edición 32, 2024, Página(s) 889-906, ISSN 0963-6625
Editor: SAGE Publications
DOI: 10.1177/09636625231168087

Identification of gene function based on models capturing natural variability of Arabidopsis thaliana lipid metabolism

Autores: Sandra Correa Córdoba, Hao Tong, Asdrúbal Burgos, Feng Zhu, Saleh Alseekh, Alisdair R. Fernie, Zoran Nikoloski
Publicado en: Nature Communications, Edición 14, 2023, ISSN 2041-1723
Editor: Nature Publishing Group
DOI: 10.1038/s41467-023-40644-9

Book chapters (2)

Radiometric determination of rubisco activation state and quantity in leaves

Autores: Catherine J. Ashton, Rhiannon Page, Ana K.M. Lobo, Joana Amaral, Joao A. Siqueira, Douglas J. Orr, Elizabete Carmo-Silva
Publicado en: Methods in Enzymology, Carboxylases, 2024, Página(s) 323-351
Editor: Elsevier
DOI: 10.1016/bs.mie.2024.10.018

Purification of Rubisco from Leaves

Autores: Joana Amaral, Ana K. M. Lobo, Elizabete Carmo-Silva, Douglas J. Orr
Publicado en: Methods in Molecular Biology, Photosynthesis, 2024, Página(s) 417-426
Editor: Springer US
DOI: 10.1007/978-1-0716-3790-6_22

Other (1)

Harnessing the optimization of enzyme catalytic rates in engineering of metabolic phenotypes

Autores: Zahra Razaghi-Moghadam, Fayaz Soleymani Babadi, Zoran Nikoloski
Publicado en: PLOS Computational Biology, 2024
Editor: Research Square Platform LLC
DOI: 10.21203/rs.3.rs-3915216/v1