COMBINING APPROACHES FOR PHOTOSYNTHETIC IMPROVEMENT TO ALLOW INCREASED SUSTAINABILITY IN EUROPEAN AGRICULTURE

Informazioni relative al progetto

CAPITALISE

ID dell’accordo di sovvenzione: 862201

DOI

10.3030/862201

Progetto chiuso

Data della firma CE 15 Aprile 2020

Data di avvio 1 Aprile 2020

Data di completamento 30 Novembre 2024

Finanziato da

• INDUSTRIAL LEADERSHIP - Leadership in enabling and industrial technologies – Biotechnology

Costo totale

€ 8 917 645,75

Contributo UE

€ 8 573 894,75

Coordinato da

WAGENINGEN UNIVERSITY
Netherlands

CORDIS fornisce collegamenti ai risultati finali pubblici e alle pubblicazioni dei progetti ORIZZONTE.

I link ai risultati e alle pubblicazioni dei progetti del 7° PQ, così come i link ad alcuni tipi di risultati specifici come dataset e software, sono recuperati dinamicamente da .OpenAIRE .

Risultati finali

Documents, reports (2)

Report on strategic agenda

A report will be produced, detailing the challenges, choices and impact of applying new innovations for increased photosynthetic efficiency. This will address general process recommendations for a reflective review of acceptance of new technologies.

European Strategic Research Agenda and Road Map to 2030

Road map and strategic research agenda available

Websites, patent fillings, videos etc. (1)

Project website operational

Project website online

Pubblicazioni

Peer reviewed articles (25)

Improving C3 photosynthesis by exploiting natural genetic variation: Hirschfeldia incana as a model species

Autori: Graham Taylor, Francesco Garassino, Mark G. M. Aarts, Jeremy Harbinson
Pubblicato in: Food and Energy Security, Numero 12, 2023, ISSN 2048-3694
Editore: John Wiley & Sons Ltd.
DOI: 10.1002/fes3.420

The genome sequence of Hirschfeldia incana, a new Brassicaceae model to improve photosynthetic light-use efficiency

Autori: Francesco Garassino, Raul Y. Wijfjes, Rene Boesten, Francisca Reyes Marquez, Frank F. M. Becker, Vittoria Clapero, Iris van den Hatert, Rens Holmer, M. Eric Schranz, Jeremy Harbinson, Dick de Ridder, Sandra Smit, Mark G. M. Aarts
Pubblicato in: The Plant Journal, Numero 112, 2022, Pagina/e 1298-1315, ISSN 0960-7412
Editore: Blackwell Publishing Inc.
DOI: 10.1111/tpj.16005

Genetic loci mediating circadian clock output plasticity and crop productivity under barley domestication

Autori: Manas R. Prusty, Eyal Bdolach, Eiji Yamamoto, Lalit D. Tiwari, Roi Silberman, Adi Doron‐Faigenbaum, Jeffrey L. Neyhart, David Bonfil, Khalil Kashkush, Klaus Pillen, Kevin P. Smith, Eyal Fridman
Pubblicato in: New Phytologist, Numero 230/5, 2021, Pagina/e 1787-1801, ISSN 0028-646X
Editore: Blackwell Publishing Inc.
DOI: 10.1111/nph.17284

Excised leaves show limited and species-specific effects on photosynthetic parameters across crop functional types

Autori: John N Ferguson, Tamanna Jithesh, Tracy Lawson, Johannes Kromdijk
Pubblicato in: Journal of Experimental Botany, Numero 74, 2023, Pagina/e 6662-6676, ISSN 0022-0957
Editore: Oxford University Press
DOI: 10.1093/jxb/erad319

Topology of the redox network during induction of photosynthesis as revealed by time-resolved proteomics in tobacco

Autori: David Zimmer, Corné Swart, Alexander Graf, Stéphanie Arrivault, Michael Tillich, Sebastian Proost, Zoran Nikoloski, Mark Stitt, Ralph Bock, Timo Mühlhaus, Alix Boulouis
Pubblicato in: Science Advances, Numero 7, 2024, ISSN 2375-2548
Editore: AAAS
DOI: 10.1126/sciadv.abi8307

Proteomics and constraint-based modelling reveal enzyme kinetic properties of Chlamydomonas reinhardtii on a genome scale

Autori: Marius Arend, David Zimmer, Rudan Xu, Frederik Sommer, Timo Mühlhaus, Zoran Nikoloski
Pubblicato in: Nature Communications, Numero 14, 2023, ISSN 2041-1723
Editore: Nature Publishing Group
DOI: 10.1038/s41467-023-40498-1

<i>Solanum pennellii</i> (<scp>LA5240</scp>) backcross inbred lines (<scp>BILs</scp>) for high resolution mapping in tomato

Autori: Shai Torgeman, Tzili Pleban, Yael Goldberg, Paola Ferrante, Giuseppe Aprea, Giovanni Giuliano, Yoav Yichie, Josef Fisher, Itay Zemach, Amit Koch, Edan Rochsar, Matan Oved, Kfir Bandel, Dani Zamir
Pubblicato in: The Plant Journal, Numero 119, 2024, Pagina/e 595-603, ISSN 0960-7412
Editore: Blackwell Publishing Inc.
DOI: 10.1111/tpj.16755

Epistatic QTLs for yield heterosis in tomato

Autori: Shai Torgeman, Dani Zamir
Pubblicato in: Proceedings of the National Academy of Sciences, Numero 120, 2023, ISSN 0027-8424
Editore: National Academy of Sciences
DOI: 10.1073/pnas.2205787119

Maximization of non-idle enzymes improves the coverage of the estimated maximal <i>in vivo</i> enzyme catalytic rates in <i>Escherichia coli</i>

Autori: Rudan Xu, Zahra Razaghi-Moghadam, Zoran Nikoloski
Pubblicato in: Bioinformatics, Numero 37, 2023, Pagina/e 3848-3855, ISSN 1367-4803
Editore: Oxford University Press
DOI: 10.1093/bioinformatics/btab575

Transcriptomic response to nitrogen availability reveals signatures of adaptive plasticity during tetraploid wheat domestication

Autori: Alice Pieri, Romina Beleggia, Tania Gioia, Hao Tong, Valerio Di Vittori, Giulia Frascarelli, Elena Bitocchi, Laura Nanni, Elisa Bellucci, Fabio Fiorani, Nicola Pecchioni, Stefania Marzario, Concetta De Quattro, Antonina Rita Limongi, Pasquale De Vita, Marzia Rossato, Ulrich Schurr, Jacques L David, Zoran Nikoloski, Roberto Papa
Pubblicato in: The Plant Cell, Numero 36, 2024, Pagina/e 3809-3823, ISSN 1040-4651
Editore: American Society of Plant Biologists
DOI: 10.1093/plcell/koae202

Relative flux trade-offs and optimization of metabolic network functionalities

Autori: Seirana Hashemi, Zahra Razaghi-Moghadam, Roosa A. E. Laitinen, Zoran Nikoloski
Pubblicato in: Computational and Structural Biotechnology Journal, Numero 20, 2022, Pagina/e 3963-3971, ISSN 2001-0370
Editore: Elsevier
DOI: 10.1016/j.csbj.2022.07.038

Cytonuclear interactions modulate the plasticity of photosynthetic rhythmicity and growth in wild barley

Autori: Lalit Dev Tiwari, Eyal Bdolach, Manas Ranjan Prusty, Schewach Bodenheimer, Avital Be'ery, Adi Faigenboim‐Doron, Eiji Yamamoto, Klára Panzarová, Khalil Kashkush, Noam Shental, Eyal Fridman
Pubblicato in: Physiologia Plantarum, Numero 176, 2024, ISSN 0031-9317
Editore: Blackwell Publishing Inc.
DOI: 10.1111/ppl.14192

Maximizing multi-reaction dependencies provides more accurate and precise predictions of intracellular fluxes than the principle of parsimony

Autori: Seirana Hashemi, Zahra Razaghi-Moghadam, Zoran Nikoloski
Pubblicato in: PLOS Computational Biology, Numero 19, 2023, Pagina/e e1011489, ISSN 1553-7358
Editore: PLOS
DOI: 10.1371/journal.pcbi.1011489

Combination of network and molecule structure accurately predicts competitive inhibitory interactions

Autori: Zahra Razaghi-Moghadam, Ewelina M. Sokolowska, Marcin A. Sowa, Aleksandra Skirycz, Zoran Nikoloski
Pubblicato in: Computational and Structural Biotechnology Journal, Numero 19, 2024, Pagina/e 2170-2178, ISSN 2001-0370
Editore: CSB
DOI: 10.1016/j.csbj.2021.04.012

Regulation of Rubisco activity in crops

Autori: Joana Amaral, Ana K. M. Lobo, Elizabete Carmo‐Silva
Pubblicato in: New Phytologist, Numero 241, 2024, Pagina/e 35-51, ISSN 0028-646X
Editore: Blackwell Publishing Inc.
DOI: 10.1111/nph.19369

Crops under past diversification and ongoing climate change: more than just selection of nuclear genes for flowering

Autori: Lalit Dev Tiwari, Ayelet Kurtz-Sohn, Eyal Bdolach, Eyal Fridman
Pubblicato in: Journal of Experimental Botany, Numero 74, 2023, Pagina/e 5431-5440, ISSN 0022-0957
Editore: Oxford University Press
DOI: 10.1093/jxb/erad283

From data to knowledge – big data needs stewardship, a plant phenomics perspective

Autori: Daniel Arend; Dennis Psaroudakis; Junaid Altaf Memon; Elena Rey‐Mazón; Danuta Schüler; Jedrzej Jakub Szymanski; Uwe Scholz; Astrid Junker; Matthias Lange
Pubblicato in: The Plant Journal, Numero 09607412, 2022, Pagina/e 335-347, ISSN 0960-7412
Editore: Blackwell Publishing Inc.
DOI: 10.1111/tpj.15804

Data integration across conditions improves turnover number estimates and metabolic predictions

Autori: Philipp Wendering, Marius Arend, Zahra Razaghi-Moghadam, Zoran Nikoloski
Pubblicato in: Nature Communications, Numero 14, 2023, Pagina/e 1485, ISSN 2041-1723
Editore: Nature Publishing Group
DOI: 10.1038/s41467-023-37151-2

Improving plant productivity by re-tuning the regeneration of RuBP in the Calvin–Benson–Bassham cycle

Autori: Christine Raines
Pubblicato in: New Phytologist, 2022, Pagina/e 236, ISSN 0028-646X
Editore: Blackwell Publishing Inc.
DOI: 10.1111/nph.18394

Genetic variation in photosynthesis: many variants make light work

Autori: Johannes Kromdijk, Alistair J McCormick
Pubblicato in: Journal of Experimental Botany, Numero 73, 2022, Pagina/e 3053-3056, ISSN 0022-0957
Editore: Oxford University Press
DOI: 10.1093/jxb/erac129

Prediction of metabolite–protein interactions based on integration of machine learning and constraint-based modeling

Autori: Fayaz Soleymani Babadi, Zahra Razaghi-Moghadam, Fatemeh Zare-Mirakabad, Zoran Nikoloski
Pubblicato in: Bioinformatics Advances, Numero 3, 2023, ISSN 2635-0041
Editore: Oxford University Press
DOI: 10.1093/bioadv/vbad098

Perspectives on improving photosynthesis to increase crop yield

Autori: Roberta Croce, Elizabete Carmo-Silva, Young B Cho, Maria Ermakova, Jeremy Harbinson, Tracy Lawson, Alistair J McCormick, Krishna K Niyogi, Donald R Ort, Dhruv Patel-Tupper, Paolo Pesaresi, Christine Raines, Andreas P M Weber, Xin-Guang Zhu
Pubblicato in: The Plant Cell, Numero 36, 2024, Pagina/e 3944-3973, ISSN 1040-4651
Editore: American Society of Plant Biologists
DOI: 10.1093/plcell/koae132

Genetics as a key to improving crop photosynthesis

Autori: Tom P.J.M Theeuwen; Louise L. Logie; Jeremy Harbinson; Mark G. M. Aarts
Pubblicato in: Journal of Experimental Botany, Volume 73, Numero 10, Numero 10, 2022, Pagina/e 3122–3137, ISSN 0022-0957
Editore: Oxford University Press
DOI: 10.1093/jxb/erac076

Breeding by intervening: Exploring the role of associations and deliberation in consumer acceptance of different breeding techniques

Autori: Paul Nales, Arnout R.H. Fischer
Pubblicato in: Public Understanding of Science, Numero 32, 2024, Pagina/e 889-906, ISSN 0963-6625
Editore: SAGE Publications
DOI: 10.1177/09636625231168087

Identification of gene function based on models capturing natural variability of Arabidopsis thaliana lipid metabolism

Autori: Sandra Correa Córdoba, Hao Tong, Asdrúbal Burgos, Feng Zhu, Saleh Alseekh, Alisdair R. Fernie, Zoran Nikoloski
Pubblicato in: Nature Communications, Numero 14, 2023, ISSN 2041-1723
Editore: Nature Publishing Group
DOI: 10.1038/s41467-023-40644-9

Book chapters (2)

Radiometric determination of rubisco activation state and quantity in leaves

Autori: Catherine J. Ashton, Rhiannon Page, Ana K.M. Lobo, Joana Amaral, Joao A. Siqueira, Douglas J. Orr, Elizabete Carmo-Silva
Pubblicato in: Methods in Enzymology, Carboxylases, 2024, Pagina/e 323-351
Editore: Elsevier
DOI: 10.1016/bs.mie.2024.10.018

Purification of Rubisco from Leaves

Autori: Joana Amaral, Ana K. M. Lobo, Elizabete Carmo-Silva, Douglas J. Orr
Pubblicato in: Methods in Molecular Biology, Photosynthesis, 2024, Pagina/e 417-426
Editore: Springer US
DOI: 10.1007/978-1-0716-3790-6_22

Other (1)

Harnessing the optimization of enzyme catalytic rates in engineering of metabolic phenotypes

Autori: Zahra Razaghi-Moghadam, Fayaz Soleymani Babadi, Zoran Nikoloski
Pubblicato in: PLOS Computational Biology, 2024
Editore: Research Square Platform LLC
DOI: 10.21203/rs.3.rs-3915216/v1