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AQUAculture infrastructures for EXCELlence in EUropean fish research 3.0

CORDIS fornisce collegamenti ai risultati finali pubblici e alle pubblicazioni dei progetti ORIZZONTE.

I link ai risultati e alle pubblicazioni dei progetti del 7° PQ, così come i link ad alcuni tipi di risultati specifici come dataset e software, sono recuperati dinamicamente da .OpenAIRE .

Risultati finali

TNA Application Package including online application & review system

Full set of materials to promote TNA provide guidance on the RIs and means of access terms and conditions and expected outputs

TNA Monitoring & Reporting online System

ARIAbased system including a repository for project documents and publications

Standardized protocol for real-time microbiome monitoring in fish experimental facilities

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Pubblicazioni

Isolation and Characterization of Highly Pure Type A Spermatogonia From Sterlet (Acipenser ruthenus) Using Flow-Cytometric Cell Sorting

Autori: Xuan Xie, Tomáš Tichopád, Galina Kislik, Lucie Langerová, Pavel Abaffy, Radek Šindelka, Roman Franěk, Michaela Fučíková, Christoph Steinbach, Mujahid Ali Shah, Ivo Šauman, Fan Chen and Martin Pšenička
Pubblicato in: Frontiers in Cell and Developmental Biology, 2021, ISSN 2296-634X
Editore: Frontiers Media
DOI: 10.3389/fcell.2021.772625

Production of common carp donor-derived offspring from goldfish surrogate broodstock

Autori: Roman Franěk, Vojtěch Kašpar, Mujahid Ali Shah, David Gela, Martin Pšenička
Pubblicato in: Aquaculture, Numero 534, 15 March 2021, 736252, 2021, ISSN 0044-8486
Editore: Elsevier BV
DOI: 10.1016/j.aquaculture.2020.736252

Understanding how high stocking densities and concurrent limited oxygen availability drive social cohesion and adaptive features in regulatory growth, antioxidant defense and lipid metabolism in farmed gilthead sea bream (Sparus aurata)

Autori: Holhorea PG, Naya-Català F, Belenguer Á, Calduch-Giner JA, Pérez-Sánchez J
Pubblicato in: Frontiers in Physiology, Numero 14, 2023, Pagina/e 1272267, ISSN 1664-042X
Editore: Frontiers Research Foundation
DOI: 10.3389/fphys.2023.1272267

Fish microbiomics: Strengths and limitations of MinION sequencing of gilthead sea bream (Sparus aurata) intestinal microbiota

Autori: Toxqui-Rodríguez S, Naya-Català F, Sitjà-Bobadilla A, Piazzon MA, Pérez-Sánchez J
Pubblicato in: Aquaculture, Numero 569, 2023, Pagina/e 739388, ISSN 0044-8486
Editore: Elsevier BV
DOI: 10.1016/j.aquaculture.2023.739388

Who is the best surrogate for germ stem cell transplantation in fish?

Autori: Roman Franěk, Yu Cheng, Michaela Fučíková, Vojtěch Kašpar, Xuan Xie, Mujahid Ali Shah, Otomar Linhart, Ivo Šauman, Martin Pšenička
Pubblicato in: Aquaculture, Numero 549, 2022, ISSN 0044-8486
Editore: Elsevier BV
DOI: 10.1016/j.aquaculture.2021.737759

Moving Beyond Oxford Nanopore Standard Procedures: New Insights from Water and Multiple Fish Microbiomes

Autori: Ricardo Domingo-Bretón, Federico Moroni, Socorro Toxqui-Rodríguez, Álvaro Belenguer, M. Carla Piazzon, Jaume Pérez-Sánchez, Fernando Naya-Català
Pubblicato in: International Journal of Molecular Sciences, Numero 25, 2024, Pagina/e 12603, ISSN 1422-0067
Editore: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms252312603

Cold-shock androgenesis in common carp (Cyprinus carpio)

Autori: Vojtěch Kašpar; Martin Hubálek; Martin Pšenička; Katsutoshi Arai; John B. Taggart; Roman Franěk
Pubblicato in: Aquaculture, Numero 548, 2022, ISSN 0044-8486
Editore: Elsevier BV
DOI: 10.1016/j.aquaculture.2021.737610

Are bold-shy personalities of European perch (Perca fluviatilis) linked to stress tolerance and immunity? A scope of harnessing fish behavior in aquaculture

Autori: Tatyana Gebauer, Radek Gebauer, Petr Císař, Jan Černý, Deepali Rahi Roy, Mahyar Zare, Marieke Verleih, Vlastimil Stejskal, Alexander Rebl
Pubblicato in: Fish & Shellfish Immunology, Numero online on 27th October 2023, 2023, Pagina/e 109190, ISSN 1050-4648
Editore: Academic Press
DOI: 10.1016/j.fsi.2023.109190

SAMBA: Structure-Learning of Aquaculture Microbiomes using a Bayesian Approach

Autori: Beatriz Soriano, Ahmed Ibrahem Hafez, Fernando Naya-Català, Federico Moroni, Roxana Andreea Moldovan, Socorro Toxqui-Rodríguez, M. Carla Piazzon, Vicente Arnau, Carlos Llorens, Jaume Pérez-Sánchez
Pubblicato in: Genes, Numero 14, 2024, Pagina/e 1650, ISSN 2073-4425
Editore: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.1101/2022.12.30.522281

A Web-Based Platform for Efficient and Robust Simulation of Aquaculture Systems using Integrated Intelligent Agents

Autori: Aya Saad, Biao Su, Finn Olav Bjørnson
Pubblicato in: Procedia Computer Science, Numero 225 (2023), 2023, Pagina/e 4560-4569, ISSN 1877-0509
Editore: Elsevier
DOI: 10.1016/j.procs.2023.10.454

Enhancement of zebrafish sperm production via a large body-sized surrogate with germ cell transplantation

Autori: Rigolin Nayak, Roman Franěk, Radek Šindelka, Martin Pšenička
Pubblicato in: Communication biology, Numero Volume 6, 14th April 2023, 2023, ISSN 2399-3642
Editore: Nature
DOI: 10.1038/s42003-023-04800-7

Effects of dietary co-exposure to fungal and herbal functional feed additives on immune parameters and microbial intestinal diversity in rainbow trout (Oncorhynchus mykiss)

Autori: Julia Mougin, Victor P. Lobanov, M. Danion, R. Roquigny, L. Goardon, T. Grard, T. Morin, L. Labbe, Alyssa Joyce
Pubblicato in: Fish & Shellfish Immunology, Numero Volume 137, June 2023, 108773, 2023, ISSN 1050-4648
Editore: Academic Press
DOI: 10.1016/j.fsi.2023.108773

Optimization of in vitro culture conditions of common carp germ cells for purpose of surrogate production

Autori: Xuan Xie; Roman Franěk; Martin Pšenička; Fan Chen; Vojtech Kašpar
Pubblicato in: Frontiers in Veterinary Science, Numero 9-2022, 2022, ISSN 2297-1769
Editore: Front.Vet.Sci.
DOI: 10.3389/fvets.2022.1036495

Quantifying dominant bacterial genera detected in metagenomic data from fish eggs and larvae using genus-specific primers

Autori: Babak Najafpour, Patricia I.S. Pinto, V.M. Canario, Deborah M. Power
Pubblicato in: Microorganisms, Numero 20, 2021, ISSN 2076-2607
Editore: MDPI
DOI: 10.1002/mbo3.1274

Behavioural Monitoring Underlines Habituation to Repeated Stressor Stimuli in Farmed Gilthead Sea Bream (Sparus aurata) Reared at a High Stocking Density

Autori: Paul G. Holhorea, Fernando Naya-Català, Ricardo Domingo-Bretón, Federico Moroni, Álvaro Belenguer, Josep À. Calduch-Giner, Jaume Pérez-Sánchez
Pubblicato in: Biology, Numero 13, 2024, Pagina/e 879, ISSN 2079-7737
Editore: MDPI
DOI: 10.3390/biology13110879

Effects of Hydrostatic Pressure Treatment of Newly Fertilized Eggs on the Ploidy Level and Karyotype of Pikeperch Sander lucioperca (Linnaeus, 1758)

Autori: Jenő Káldy; Eszter Patakiné Várkonyi; Georgina Fazekas; Zoltán Nagy; Zsuzsanna Jakabné Sándor; Katalin Bogár; Gyula Kovács; Mariann Molnár; Bence Lázár; Katalin Goda; Zsuzsanna Gyöngy; Zsuzsanna Ritter; Péter Nánási; Ákos Horváth; Uroš Ljubobratović
Pubblicato in: Life; Volume 11; Numero 12; Pages: 1296, Numero 1, 2021, ISSN 2075-1729
Editore: MDPI
DOI: 10.3390/life11121296

Differential Reshaping of Skin and Intestinal Microbiota by Stocking Density and Oxygen Availability in Farmed Gilthead Sea Bream (Sparus aurata): A Behavioral and Network-Based Integrative Approach

Autori: Toxqui-Rodríguez S, Holhorea PG, Naya-Català F, Calduch-Giner JÀ, Sitjà-Bobadilla A, Piazzon C, Pérez-Sánchez J
Pubblicato in: Microorganisms, Numero 12, 2024, Pagina/e 1360, ISSN 2076-2607
Editore: MDPI
DOI: 10.3390/microorganisms12071360

Revising the Impact and Prospects of Activity and Ventilation Rate Bio-Loggers for Tracking Welfare and Fish-Environment Interactions in Salmonids and Mediterranean Farmed Fish

Autori: Calduch-Giner J, Holhorea PG, Ferrer MÁ, Naya-Català F, Rosell-Moll E, Vega García C, Prunet P, Espmark ÅM, Leguen I, Kolarevic J, Vega A, Kerneis T, Goardon L, Afonso JM, Pérez-Sánchez J.
Pubblicato in: Frontiers in Marine Science, Numero 9, 2022, Pagina/e 854888, ISSN 2296-7745
Editore: Frontiers Media
DOI: 10.3389/fmars.2022.854888

Are the Main Methionine Sources Equivalent? A Focus on DL-Methionine and DL-Methionine Hydroxy Analog Reveals Differences on Rainbow Trout Hepatic Cell Lines Functions

Autori: Karine Pinel, Cécile Heraud, Guillaume Morin, Karine Dias, Annaëlle Marcé, Linda Beauclair, Stéphanie Fontagné-Dicharry, Karthik   Masagounder, Martina Klünemann, Iban Seiliez and Florian Beaumatin
Pubblicato in: International Journal of Molecular Sciences, Numero Semimonthly, 2022, ISSN 1422-0067
Editore: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms23062935

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