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Pan-genome Graph Algorithms and Data Integration

Projektbeschreibung

Graph-based representation of the genome sequence data

Modern sequencing technology produces genome sequence data on a gigantic scale reaching into exabytes. The emerging urgent question is how these volumes of data could be arranged and analysed in a computationally efficient and biomedically meaningful manner. This EU-funded project is going to explore graph-based representation of large genome datasets and determine their advantages over traditional sequence-based presentation of pan-genomic data. Genomes that are evolutionarily close vary only a little and graph-based pan-genomic representation allows to remove redundancies while highlighting important differences. The research is going to demonstrate the advantage of the shift to the new data representation approach using comparative analysis, compression, integration and exploitation of genome data as the fundamental points.

Wissenschaftliches Gebiet

  • /Naturwissenschaften/Biowissenschaften/Genetik und Vererbung
  • /Naturwissenschaften/Biowissenschaften/Genetik und Vererbung/Nukleotid
  • /Naturwissenschaften/Biowissenschaften/Genetik und Vererbung/Genom
  • /Sozialwissenschaften/Rechtswissenschaften

Aufforderung zur Vorschlagseinreichung

H2020-MSCA-RISE-2019
Andere Projekte für diesen Aufruf anzeigen

Finanzierungsplan

MSCA-RISE - Marie Skłodowska-Curie Research and Innovation Staff Exchange (RISE)

Koordinator

UNIVERSITA' DEGLI STUDI DI MILANO-BICOCCA
Adresse
Piazza Dell'ateneo Nuovo 1
20126 Milano
Italien
Aktivitätstyp
Higher or Secondary Education Establishments
EU-Beitrag
€ 197 800

Beteiligte (6)

STICHTING NEDERLANDSE WETENSCHAPPELIJK ONDERZOEK INSTITUTEN
Niederlande
EU-Beitrag
€ 142 600
Adresse
Winthontlaan 2
3526 KV Utrecht
Aktivitätstyp
Research Organisations
UNIVERSITAET BIELEFELD
Deutschland
EU-Beitrag
€ 202 400
Adresse
Universitaetsstrasse 25
33615 Bielefeld
Aktivitätstyp
Higher or Secondary Education Establishments
UNIVERZITA KOMENSKEHO V BRATISLAVE
Slowakei
EU-Beitrag
€ 128 800
Adresse
Safarikovo Nam 6
814 99 Bratislava
Aktivitätstyp
Higher or Secondary Education Establishments
GENETON S.R.O.
Slowakei
EU-Beitrag
€ 322 000
Adresse
Ilkovicova 8
841 04 Bratislava
Aktivitätstyp
Private for-profit entities (excluding Higher or Secondary Education Establishments)
INSTITUT PASTEUR
Frankreich
EU-Beitrag
€ 147 200
Adresse
Rue Du Docteur Roux 25-28
75724 Paris Cedex 15
Aktivitätstyp
Research Organisations
ILLUMINA CAMBRIDGE LTD
United Kingdom
EU-Beitrag
€ 0
Adresse
Illumina Centre 19 Granta Park
CB21 9DF Great Abington
Aktivitätstyp
Private for-profit entities (excluding Higher or Secondary Education Establishments)

Partner (4)

CORNELL UNIVERSITY
Vereinigte Staaten
Adresse
Pine Tree Road 373
14850 Ithaca Ny
Aktivitätstyp
Higher or Secondary Education Establishments
NATIONAL UNIVERSITY CORPORATION THEUNIVERSITY OF TOKYO
Japan
Adresse
Hongo Bunkyo Ku 7 3 1
113 8656 Tokyo
Aktivitätstyp
Higher or Secondary Education Establishments
Simon Fraser University
Kanada
Adresse
University Drive 8888
V5A 1S6 Burnaby
Aktivitätstyp
Higher or Secondary Education Establishments
The Pennsylvania State University
Vereinigte Staaten
Adresse
Technology Center Bldg. 110
16802 University Park
Aktivitätstyp
Higher or Secondary Education Establishments