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CORDIS - Wyniki badań wspieranych przez UE
CORDIS

European Network of Fourier-Transform Ion-Cyclotron-Resonance Mass Spectrometry Centers

Rezultaty

Final report of the different short courses (Agenda, nber of participants, location, logistics & details) and short course materials - Location: Joensuu

The short course organised in Joensuu at month 52 will be reported in this deliverable

Course material and school proceedings for the different AUS

Pdf files of the slides from the speakers. Report of the round-tables. Resp: FC-LISB and PRAG. two submissions planned at M18; M43.

Final report of the different short courses (Agenda, nber of participants, location, logistics & details) and short course materials - Location: Lisbon

The short course organised in Lisbon at month 45 will be reported in this deliverable

Transfer of the ion mobility and imaging know-how

The protocol will describe the sample preparation the tuning of the instrument and the data treatment in a format similar to a Nature protocole article

"18-month activity report of the EU_FT-ICR_MS network (Number of proposals, number of experiences.) - Iteration#3"

Number of proposals number of experiences number of acknowledgments number of published papers ranking of the journals

Bid for the organization of the 2020 edition of the European FTMS conference (to be done at the 2018 edition)

Bid for the organization of the 2020 edition of the European FTMS conference (to be done at the 2018 edition) (CNRS-LILL – M3)

"Standardized protocols for the more common samples - iteration#2"

The protocol will describe the sample preparation, the tuning of the instrument and the data treatment in a format similar to a Nature protocole article.

Final report of the different short courses (Agenda, nber of participants, location, logistics & details) and short course materials - Locations: Liège-Lille

The shorts courses organised in Lige at month 54 and in Lille also at month 54 will be reported in this deliverable CNRSLILLE and LIEGE will be responsible for the deliverable

"Round-robin test results - iteration#3"

The results of the Roundrobin test results will consist of the anonymized results of all centers and of the statistic analysis of the data

Final report of the different End User Schools

The report will cover both the scientific content, the quality of exchanges with the speakers and between participants the quality of the teaching support and the accommodation. Resp: UEF and CNRS-LILL; two submissions planned at M9 and M31

Standardized protocol for ultra-high resolution FT-ICR MS measurement

The protocol will describe the steps for the tuning of the instrument and the data treatment in a format similar to a Nature protocole article

EU_FT-ICR_MS handbook for the proposal submission

The handbook will explain how to submit a project, the mitigation procedure if a project is refused, the sample transportation rules and the ethical guidelines

Data/metadata specification

The Data/metadata specification will include a open file format for allowing expoitation of the TNA (WP1) data by an external user. The Data/metadata specification will include a list of mandatory items and a list of facultative items.

"Final report of the different AUS - Iteration#2"

The report will cover both the scientific content the quality of exchanges with the speakers and between participants the quality of the teaching support and the accommodation

"18-month activity report of the EU_FT-ICR_MS network (Number of proposals, number of experiences.) - Iteration#2"

Number of proposals, number of experiences, number of acknowledgments, number of published papers, ranking of the journals.

Short-term impact assessment

"Round-robin test results - iteration#2"

The results of the Roundrobin test results will consist of the anonymized results of all centers and of the statistic analysis of the data

"Course material and school proceedings for the different AUS - Iteration#2"

Pdf files of the slides from the speakers Report of the roundtables

Recommendations to expand harmonics detection to high magnetic field

The recommendations will describe the steps for the tuning of the instrument and the data treatment in a format similar to a Nature protocole article

Final report of the different short courses (Agenda, number of participant, location, logistic detail) and short course material

Final report of the different short courses Agenda nub of participant location logistic detail and short course material 10 submissions are planned UHRO M4 CNRSORSA M11 ROMA M19 WARW M21 MOSC M23 FCLISB M28 PRAG M33 LIEG M35 UEF M40 CNRSLILL M45

"Standardized protocols for the more common samples - iteration#3"

The protocol will describe the sample preparation the tuning of the instrument and the data treatment in a format similar to a Nature protocole article

Final report of the different Advanced User Schools

The report will cover both the scientific content the quality of exchanges with the speakers and between participants the quality of the teaching support and the accommodation Resp FCLISB and PRAG two submissions planned at M18 M43

Annual activity report of the EU_FT-ICR_MS network (Number of proposals, number of experiences..)

Number of proposals, number of experiences, number of acknowledgments, number of published papers, ranking of the journals.

"Standardized protocols for the more common samples - iteration#1"

The protocol will describe the sample preparation, the tuning of the instrument and the data treatment in a format similar to a Nature protocole article.

Course material and school proceedings for the different EUS

Pdf files of the slides from the speakers. Report of the round-tables. Resp: UEF and CNRS-LILL. two submissions planned at M9; M31.

"Course material and school proceedings for the different EUS - Iteration#2"

Course material and school proceedings for the different EUS

"Round-robin test results - iteration#1"

The results of the Roundrobin test results will consist of the anonymized results of all centers and of the statistic analysis of the data

"Final report of the different End User Schools (Agenda, nber of participant, location, logistic detail) - Iteration#2"

The report will cover both the scientific content the quality of exchanges with the speakers and between participants the quality of the teaching support and the accommodation

Project handbook

internal governance, administrative and financial guidelines on the project management implementation

Project videos for general users

(conception and realization of interviews, concept videos)

Project Website

creation of the website page and content

Social network account

Creation of twitter project account

"Data management plan– Iterations#1 and #2"

The data management plan will be a cookbook giving all the good laboratory practices which will be mandatory for the academic partners for storing and archiving the data from TNA (WP1).

"Data management plan - iteration#3"

The data management plan will be a cookbook giving all the good laboratory practices which will be mandatory for the academic partners for storing and archiving the data from TNA (WP1).

"Data management plan - iteration #4"

The data management plan will be a cookbook giving all the good laboratory practices which will be mandatory for the academic partners for storing and archiving the data from TNA WP1

Publikacje

Editorial: Metabolomics in Crop Research—Current and Emerging Methodologies

Autorzy: Marta Sousa Silva, Carlos Cordeiro, Ute Roessner and Andreia Figueiredo
Opublikowane w: Frontiers in plant science, 2019, ISSN 0000-0000
Wydawca: -

pH modifies the oxidative potential and peroxide content of biomass burning HULIS under dark aging

Autorzy: Li, Chunlin; Fang, Zheng; Czech, Hendryk; Schneider, Eric; Rüger, Christopher P.; Pardo, Michal; Zimmermann, Ralf; Chen, Jianmin; Laskin, Alexandre; Rudich, Yinon
Opublikowane w: Science of The Total Environment, 2022, ISSN 0000-0000
Wydawca: Elsevier
DOI: 10.1016/j.scitotenv.2022.155365

On the Occurrence and Multimerization of Two-Polypeptide Phage Endolysins Encoded in Single Genes

Autorzy: Pinto, D., Gonçalo, R., Louro, M., Silva, M.S., Hernandez, G., Cordeiro, T.N., Cordeiro, C., São-José, C.
Opublikowane w: Microbiology Spectrum, 2022, ISSN 0000-0000
Wydawca: American Society for Microbiology
DOI: 10.1128/spectrum.01037-22

Ligation Motifs in Zinc-Bound Sulfonamide Drugs Assayed byIR Ion Spectroscopy

Autorzy: Corinti, Davide Chiavarino, Barbara Maitre, Philippe Crestoni, Maria Elisa Fornarini, Simonetta
Opublikowane w: Molecules, Numer 00000000, 2022, ISSN 0000-0000
Wydawca: MDPI
DOI: 10.3390/molecules27103144

In-Depth Analysis of Raw Bio-Oil and Its Hydrodeoxygenated Products for a Comprehensive Catalyst Performance Evaluation

Autorzy: Idoia Hita, Tomás Cordero-Lanzac, Timo Kekäläinen, Ogechukwu Okafor, José Rodríguez-Mirasol, Tomás Cordero, Javier Bilbao, Janne Jänis, Pedro Castano
Opublikowane w: ACS Sustainable Chemistry & Engineering, Numer 8/50, 2020, Strona(/y) 18433-18445, ISSN 2168-0485
Wydawca: American Chemical Society
DOI: 10.1021/acssuschemeng.0c05533

Molecular Properties of Bare and Microhydrated Vitamin B5–Calcium Complexes

Autorzy: Davide Corinti, Barbara Chiavarino, Debora Scuderi, Caterina Fraschetti, Antonello Filippi, Simonetta Fornarini, Maria Elisa Crestoni
Opublikowane w: International Journal of Molecular Sciences, Numer 22/2, 2021, Strona(/y) 692, ISSN 1422-0067
Wydawca: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms22020692

FT-ICR-MS-based metabolomics: A deep dive into plant metabolism

Autorzy: Maia, M., Figueiredo, A., Cordeiro, C., Sousa Silva, M.
Opublikowane w: Mass Spectrometry Review, 2021, ISSN 0000-0000
Wydawca: -
DOI: 10.1002/mas.21731

Platinum-Triggered Bond-Cleavage of Pentynoyl Amide and N -Propargyl Handles for Drug-Activation

Autorzy: Bruno L. Oliveira, Benjamin J. Stenton, V. B. Unnikrishnan, Cátia Rebelo de Almeida, João Conde, Magda Negrão, Felipe S. S. Schneider, Carlos Cordeiro, Miguel Godinho Ferreira, Giovanni F. Caramori, Josiel B. Domingos, Rita Fior, Gonçalo J. L. Bernardes
Opublikowane w: Journal of the American Chemical Society, Numer 142/24, 2020, Strona(/y) 10869-10880, ISSN 0002-7863
Wydawca: American Chemical Society
DOI: 10.1021/jacs.0c01622

Characterization of porphobilinogen deaminase mutants reveals that arginine-173 is crucial for polypyrrole elongation mechanism

Autorzy: Helene J. Bustad, Juha P. Kallio, Mikko Laitaoja, Karen Toska, Inari Kursula, Aurora Martinez, Janne Jänis
Opublikowane w: IScience, Numer 00000000, 2021, ISSN 0000-0000
Wydawca: CellPress
DOI: 10.1016/j.isci.2021.102152

Investigation of Island/Single-Core- and Archipelago/Multicore-Enriched Asphaltenes and Their Solubility Fractions by Thermal Analysis Coupled with High-Resolution Fourier Transform Ion Cyclotron Resonance Mass Spectrometry

Autorzy: Anika Neumann, Martha Liliana Chacón-Patiño, Ryan P. Rodgers, Christopher P. Rüger, Ralf Zimmermann
Opublikowane w: Energy & Fuels, 2020, ISSN 0887-0624
Wydawca: American Chemical Society
DOI: 10.1021/acs.energyfuels.0c03751

IR ion spectroscopy in a combined approach with MS/MS and IM-MS to discriminate epimeric anthocyanin glycosides (cyanidin 3-O-glucoside and -galactoside)

Autorzy: Davide Corinti, Alessandro Maccelli, Maria Elisa Crestoni, Stefania Cesa, Deborah Quaglio, Bruno Botta, Cinzia Ingallina, Luisa Mannina, Aura Tintaru, Barbara Chiavarino, Simonetta Fornarini
Opublikowane w: International Journal of Mass Spectrometry, Numer 444, 2019, Strona(/y) 116179, ISSN 1387-3806
Wydawca: Elsevier BV
DOI: 10.1016/j.ijms.2019.116179

Regio- and Stereo-Specific Chemical Depolymerization of High Molecular Weight Polybutadiene and Polyisoprene for Their Analysis by High-Resolution Fourier Transform Ion Cyclotron Resonance Mass Spectrometry: Comparison with Pyrolysis-Comprehensive Two-Dimensional Gas Chromatography/Mass Spectrometry, Atmospheric Solid Analysis Probe, Direct Inlet Probe-Atmospheric Pressure Chemical Ionization Mass

Autorzy: Ziad Mahmoud, Fabrice Bray, Marie Hubert-Roux, Michel Sablier, Carlos Afonso, Christian Rolando
Opublikowane w: Analytical Chemistry, Numer 92/24, 2020, Strona(/y) 15736-15744, ISSN 0003-2700
Wydawca: American Chemical Society
DOI: 10.1021/acs.analchem.0c02650

Molecular Interactions Driving Intermediate Filament Assembly

Autorzy: Vermeire P-J, Stalmans G, Lilina AV, Fiala J, Novak P, Herrmann H, Strelkov SV
Opublikowane w: Cells, Numer 00000000, 2021, ISSN 0000-0000
Wydawca: MDPI
DOI: 10.3390/cells10092457

Cost-efficient and user-friendly 17O/18O labeling procedures of fatty acids using mechanochemistry

Autorzy: Špačková, J.; Fabra, C.; Cazals, G.; Hubert-Roux, M.; Schmitz-Afonso, I.; Goldberga, I.; Berthomieu, D.; Lebrun, A.; Métro, T.-X.; Laurencin, D.
Opublikowane w: Chemical Communications, Numer 00000000, 2021, ISSN 0000-0000
Wydawca: Royal Society of Chemistry
DOI: 10.1039/d1cc02165f

MS-Based Approaches Enable the Structural Characterization of Transcription Factor/DNA Response Element Complex

Autorzy: Slavata, Chmelík, Kavan, Filandrová, Fiala, Rosůlek, Mrázek, Kukačka, Vališ, Man, Miller, McIntyre, Fabris, Novák
Opublikowane w: Biomolecules, Numer 9/10, 2019, Strona(/y) 535, ISSN 2218-273X
Wydawca: MDPI
DOI: 10.3390/biom9100535

LinX: A Software Tool for Uncommon Cross-Linking Chemistry.

Autorzy: Kukacka Z, Rosulek M, , Jelinek J, Slavata L, Kavan D, Novak P.
Opublikowane w: Journal of Proteome Research, Numer 00000000, 2021, ISSN 0000-0000
Wydawca: American Chemical Society
DOI: 10.1021/acs.jproteome.0c00858

SAP domain forms a flexible part of DNA aperture in Ku70/80.

Autorzy: Hnízda A, Tesina P, Nguyen TB, Kukačka Z, Kater L, Chaplin A, Beckmann R, Ascher DB, Novák P, Blundell TL.
Opublikowane w: The Febs Journal, Numer 00000000, 2021, ISSN 0000-0000
Wydawca: FebsPress
DOI: 10.1111/febs.15732

Visualization and identification of single meteoritic organic molecules by atomic force microscopy

Autorzy: Kaiser, K.; Schulz, F.; Maillard, J. F.; Hermann, F.; Pozo, I.; Peña, D.; Cleaves, H. J.; Burton, A. S.; Danger, G.; Afonso, C.
Opublikowane w: Meteoritics & Planetary Science, 2022, ISSN 0000-0000
Wydawca: John Wiley & Sons, Ltd
DOI: 10.1111/maps.13784

PyC2MC: an open-source software solution for visualization and treatment of high-resolution mass spectrometry data

Autorzy: Sueur, Maxime; Maillard, Julien F.; Lacroix-Andrivet, Oscar; Rüger, Christopher P.; Giusti, Pierre; Lavanant, Hélène; Afonso, Carlos
Opublikowane w: American Society for Mass Spectrometry, 2023, ISSN 0000-0000
Wydawca: ACS Publications
DOI: 10.1021/jasms.2c00323

Selective characterization of petroporphyrins in shipping fuels and their corresponding emissions using electron-transfer matrix-assisted laser desorption/ionization Fourier transform ion cyclotron resonance mass spectrometry

Autorzy: Sueur, Maxime; Rüger, Christopher P.; Maillard, Julien F.; Lavanant, Hélène; Zimmermann, Ralf; Afonso, Carlos
Opublikowane w: Fuel, 2023, ISSN 0000-0000
Wydawca: Science Direct
DOI: 10.1016/j.fuel.2022.126283

Does deamidation affect inhibitory mechanisms towards amyloid protein aggregation?

Autorzy: Yuko P. Y. Lam, Cookson K. C. Chiu, Christopher A. Wootton, Ian Hands-Portman, Meng Li, Mark P. Barrow, Peter B. O'Connor
Opublikowane w: Chemical Communications, Numer 56/68, 2020, Strona(/y) 9787-9790, ISSN 1359-7345
Wydawca: Royal Society of Chemistry
DOI: 10.1039/d0cc03548c

Effect of hydrothermal carbonization and eutectic salt mixture (KCl/LiCl) on the pyrolysis of Kraft lignin as revealed by thermal analysis coupled to advanced high-resolution mass spectrometry

Autorzy: Friederici, Lukas; Meščeriakovė, Sara-Maaria; Neumann, Anika; Sermyagina, Ekaterina; Meščeriakovas, Arūnas; Lähde, Anna; Grimmer, Christoph; Streibel, Thorsten; Rüger, Christopher P.; Zimmermann, Ralf
Opublikowane w: Journal of Analytical and Applied Pyrolysis, 2022, ISSN 0000-0000
Wydawca: Elsevier
DOI: 10.1016/j.jaap.2022.105604

Real time monitoring of slow pyrolysis of polyethylene terephthalate (PET) by different mass spectrometric techniques

Autorzy: Asma Dhahak, Christoph Grimmer, Anika Neumann, Christopher Rüger, Martin Sklorz, Thorsten Streibel, Ralf Zimmermann, Guillain Mauviel, Valérie Burkle-Vitzthum
Opublikowane w: Waste Management, Numer 106, 2020, Strona(/y) 226-239, ISSN 0956-053X
Wydawca: Pergamon Press Ltd.
DOI: 10.1016/j.wasman.2020.03.028

Toxicity of Water- and Organic-Soluble Wood Tar Fractions from Biomass Burning in Lung Epithelial Cells

Autorzy: Pardo, Michal, Chunlin Li, Zheng Fang, Smadar Levin-Zaidman, Nili Dezorella, Hendryk Czech, and Patrick Martens et al.
Opublikowane w: Chemical Research in Toxicology, Numer 00000000, 2021, ISSN 0000-0000
Wydawca: American Chemical Society
DOI: 10.1021/acs.chemrestox.1c00020

Comprehensive Chemical Description of Pyrolysis Chars from Low-Density Polyethylene by Thermal Analysis Hyphenated to Different Mass Spectrometric Approaches

Autorzy: Friederici, Lukas, Eric Schneider, Gaëtan Burnens, Thorsten Streibel, Pierre Giusti, Christopher P. Rüger, and Ralf Zimmermann
Opublikowane w: Energy Fuels, Numer 00000000, 2021, ISSN 0000-0000
Wydawca: American Chemical Society
DOI: 10.1021/acs.energyfuels.1c01994

Photoinduced damage of AsLOV2 domain is accompanied by increased singlet oxygen production due to flavin dissociation

Autorzy: Martina Petrenčáková, František Filandr, Andrej Hovan, Ghazaleh Yassaghi, Petr Man, Tibor Kožár, Marc-Simon Schwer, Daniel Jancura, Andreas Plückthun, Petr Novák, Pavol Miškovský, Gregor Bánó, Erik Sedlák
Opublikowane w: Scientific Reports, Numer 10/1, 2020, ISSN 2045-2322
Wydawca: Nature Publishing Group
DOI: 10.1038/s41598-020-60861-2

PDMS Curing Inhibition on 3D-Printed Molds: Why? Also, How to Avoid It?

Autorzy: Bastien Venzac, Shanliang Deng, Ziad Mahmoud, Aufried Lenferink, Aurélie Costa, Fabrice Bray, Cees Otto, Christian Rolando, Séverine Le Gac
Opublikowane w: Analytical Chemistry, Numer 93/19, 2021, Strona(/y) 7180-7187, ISSN 0003-2700
Wydawca: American Chemical Society
DOI: 10.1021/acs.analchem.0c04944

Characterization of Crude Oil Molecules Adsorbed onto Carbonate Rock Surface Using LDI FT-ICR MS

Autorzy: Terra, N.; Ligiero, L. M.; Molinier, V.; Giusti, P.; Agenet, N.; Loriau, M.; Hubert-Roux, M.; Afonso, C.; Rodgers, R. P.
Opublikowane w: Energy & Fuels, 2022, ISSN 0000-0000
Wydawca: American Chemical Society
DOI: 10.1021/acs.energyfuels.2c00840

How to Increase Further the Resolving Power of the Ultrahigh Magnetic Field FT ICR Instruments? The New Concept of the FT ICR Cell–the Open Dynamically Harmonized Cell as a Part of the Vacuum System Wall

Autorzy: Evgeny Nikolaev, Anton Lioznov
Opublikowane w: Analytical Chemistry, Numer 93/3, 2021, Strona(/y) 1249-1253, ISSN 0003-2700
Wydawca: American Chemical Society
DOI: 10.1021/acs.analchem.0c03237

Detailed nature of tire pyrolysis oil blended with light cycle oil and its hydroprocessed products using a NiW/HY catalyst

Autorzy: Palos R, Kekäläinen, T, Duodu F, Gutierrez A, Arandes JM, Jänis J, Castano P,
Opublikowane w: Waste Management, Numer 00000000, 2021, ISSN 0000-0000
Wydawca: Science Direct
DOI: 10.1016/j.wasman.2021.04.041

Chemico-Biological Characterization of Torpedino Di Fondi® Tomato Fruits: A Comparison with San Marzano Cultivar at Two Ripeness Stages

Autorzy: Cinzia Ingallina, Alessandro Maccelli, Mattia Spano, Giacomo Di Matteo, Antonella Di Sotto, Anna Maria Giusti, Giuliana Vinci, Silvia Di Giacomo, Mattia Rapa, Salvatore Ciano, Caterina Fraschetti, Antonello Filippi, Giovanna Simonetti, Carlos Cordeiro, Marta Sousa Silva, Maria Elisa Crestoni, Anatoly P. Sobolev, Simonetta Fornarini, Luisa Mannina
Opublikowane w: Antioxidants, Numer 9/10, 2020, Strona(/y) 1027, ISSN 2076-3921
Wydawca: PubMed
DOI: 10.3390/antiox9101027

Guanine Tautomerism in Ionic Complexes with Ag+ Investigated by IRMPD Spectroscopy and Mass Spectrometry

Autorzy: Cruz-Ortiz, Andres F. Molina, Franco L. Maitre, Philippe Pino, Gustavo A
Opublikowane w: The journal of physical chemistry. B, Numer 00000000, 2021, ISSN 0000-0000
Wydawca: American Chemical Society
DOI: 10.1021/acs.jpcb.1c03796

Imaging Matrix-Assisted Laser Desorption/Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry of oxaliplatin derivatives in human tissue sections

Autorzy: Ferey, J.; Larroque, M.; Schmitz-Afonso, I.; Le Maître, J.; Sgarbura, O.; Carrere, S.; Quenet, F.; Bouyssiere, B.; Enjalbal, C.; Mounicou, S.; Afonso, C.
Opublikowane w: Talanta -The International Journal of Pure and Applied Analytical Chemistry, 2022, ISSN 0000-0000
Wydawca: Elsevier
DOI: 10.1016/j.talanta.2021.122915

Evaluation of major historical ICR cell designs using electric field simulations

Autorzy: Evgeny Nikolaev, Anton Lioznov
Opublikowane w: Mass Spectrometry Reviews, 2020, ISSN 0277-7037
Wydawca: John Wiley & Sons Inc.
DOI: 10.1002/mas.21671

Compositions of dissolved organic matter in the ice-coveredwaters above the Aurora hydrothermal vent system,Gakkel Ridge, Arctic Ocean

Autorzy: Muhammed Fatih Sert, Helge Niemann, Eoghan P. Reeves, Mats A. Granskog, Kevin P. Hand, Timo Kekäläinen, Janne Jänis, Pamela E. Rossel, Bénédicte Ferré, Anna
Opublikowane w: Biogeosciences,, Numer 00000000, 2022, ISSN 0000-0000
Wydawca: Copernicus Publications
DOI: 10.5194/bg-19-2101-2022

Untargeted metabolomics reveals anti-depressant effects in a marine photosynthetic organism: the diatom Phaeodactylum tricornutum as a case study

Autorzy: Duarte, B., Feijão, E., Cruz de Carvalho, R., Duarte, I.A., Marques, A.P., Maia, M., Hertzog, J., Matos, A.R., Cabrita, M.T., Caçador, I., Figueiredo, A., Sousa Silva, M., Cordeiro, C., Fonseca, V.F.
Opublikowane w: Biology, 2022, Strona(/y) -, ISSN 0000-0000
Wydawca: MDPI
DOI: 10.3390/biology11121770

FT-ICR Mass Spectrometry Imaging at Extreme Mass Resolving Power Using a Dynamically Harmonized ICR Cell with 1ω or 2ω Detection

Autorzy: Mathieu Tiquet, Raphaël La Rocca, Stefan Kirnbauer, Samuele Zoratto, Daan Van Kruining, Loïc Quinton, Gauthier Eppe, Pilar Martinez-Martinez, Martina Marchetti-Deschmann, Edwin De Pauw, and Johann Far
Opublikowane w: Analytical Chemistry, 2022, ISSN 0000-0000
Wydawca: American Chemical Society
DOI: 10.1021/acs.analchem.2c00754

Binding modes of a cytotoxic dinuclear copper(II) complex with phosphate ligands probed by vibrational photodissociation ion spectroscopy

Autorzy: Giampà, Marco; Corinti, Davide; Maccelli, Alessandro; Fornarini, Simonetta; Berden, Giel; Oomens, Jos; Schwarzbich, Sabrina; Glaser, Thorsten; Crestoni, Maria Elisa
Opublikowane w: Inorganic Chemistry, 2023, Strona(/y) -, ISSN 0000-0000
Wydawca: ACS Publications
DOI: 10.1021/acs.inorgchem.2c02091

Mass shift in mass spectrometry imaging: comprehensive analysis and practical corrective workflow

Autorzy: Andréa McCann, Sophie Rappe, Raphaël La Rocca, Mathieu Tiquet, Loïc Quinton, Gauthier Eppe, Johann Far, Edwin De Pauw, Christopher Kune
Opublikowane w: Analytical and Bioanalytical Chemistry, 2021, ISSN 1618-2642
Wydawca: Springer Verlag
DOI: 10.1007/s00216-021-03174-1

Specification of organosulfur compounds in carbonaceous chondrites.

Autorzy: Zherebker, Alexander, Yury Kostyukevich, Dmitry S. Volkov, Ratibor G. Chumakov, Lukas Friederici, Christopher P. Rüger, and Alexey Kononikhin et al
Opublikowane w: Scientific Reports, Numer 00000000, 2021, ISSN 0000-0000
Wydawca: Springer Nature
DOI: 10.1038/s41598-021-86576-6

Phase relationships in two-dimensional mass spectrometry

Autorzy: Maria A. van Agthoven, David P. A. Kilgour, Alice M. Lynch, Mark P. Barrow, Tomos E. Morgan, Christopher A. Wootton, Lionel Chiron, Marc-André Delsuc, Peter B. O’Connor
Opublikowane w: Journal of The American Society for Mass Spectrometry, Numer 30/12, 2019, Strona(/y) 2594-2607, ISSN 1044-0305
Wydawca: Elsevier BV
DOI: 10.1007/s13361-019-02308-1

Molecular Characterization of Water-Soluble Aerosol Particle Extracts by Ultrahigh-Resolution Mass Spectrometry: Observation of Industrial Emissions and an Atmospherically Aged Wildfire Plume at Lake Baikal

Autorzy: Schneider, Eric; Czech, Hendryk; Popovicheva, Olga; Lütdke, Hannes; Schnelle-Kreis, Jürgen; Khodzher, Tamara; Rüger, Christopher P.; Zimmermann, Ralf
Opublikowane w: ACS Earth Space Chem., 2022, ISSN 0000-0000
Wydawca: American Chemical Society
DOI: 10.1021/acsearthspacechem.2c00017

Analysis of complex drugs by comprehensive two-dimensional gas chromatography and high-resolution mass spectrometry: detailed chemical description of the active pharmaceutical ingredient sodium bituminosulfonate and its process intermediates

Autorzy: Schwalb, Lukas; Tiemann, Ole; Käfer, Uwe; Gröger, Thomas; Rüger, Christopher Paul; Gayko, Guido; Zimmermann, Ralf
Opublikowane w: Analytical and Bioanalytical Chemistry, 2022, ISSN 0000-0000
Wydawca: Springer
DOI: 10.1007/s00216-022-04393-w

Gas phase structure and fragmentation of Cytosine-Guanine Ag+ complex studied by mass-resolved IRMPD spectroscopy

Autorzy: Cruz-Ortiz, A. F. Jara-Toro, R. A. Berdakin, M. Loire, E. Pino, G. A.
Opublikowane w: The European Physical Journal D, 2021, ISSN 0000-0000
Wydawca: Springer
DOI: 10.1140/epjd/s10053-021-00129-0

IRMPD Spectroscopy of Bare Monodeprotonated Genistein, anAntioxidant Flavonoid

Autorzy: Paciotti, Roberto Chiavarino, Barbara Coletti, Cecilia Scuderi, Debora Re, Nazzareno Corinti, Davide Rotari, Lucretia Fornarini, Simonetta Crestoni, Maria Elisa
Opublikowane w: ACS Omega, Numer 00000000, 2022, ISSN 0000-0000
Wydawca: American Chemical Society
DOI: 10.1021/acsomega.2c01236

Determination of the Aggregate Binding Site of Amyloid Protofibrils Using Electron Capture Dissociation Tandem Mass Spectrometry

Autorzy: Yuko P. Y. Lam, Christopher A. Wootton, Ian Hands-Portman, Juan Wei, Cookson K. C. Chiu, I. Romero-Canelon, Frederik Lermyte, Mark P. Barrow, Peter B. O’Connor
Opublikowane w: Journal of the American Society for Mass Spectrometry, Numer 31/2, 2020, Strona(/y) 267-276, ISSN 1044-0305
Wydawca: Elsevier BV
DOI: 10.1021/jasms.9b00053

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Opublikowane w: Scientific Reports, Numer 9/1, 2019, ISSN 2045-2322
Wydawca: Nature Publishing Group
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Early modification of cytochrome c by hydrogen peroxide triggers its fast degradation

Autorzy: Nataša Tomášková, Petr Novák, Tibor Kožár, Martina Petrenčáková, Daniel Jancura, Ghazaleh Yassaghi, Petr Man, Erik Sedlák
Opublikowane w: International Journal of Biological Macromolecules, Numer 174, 2021, Strona(/y) 413-423, ISSN 0141-8130
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Comparison of Silica and Cellulose Stationary Phases to Analyze Bitumen by High-Performance Thin-Layer Chromatography Coupled to Laser Desorption Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry

Autorzy: Oscar Lacroix-Andrivet, Marie Hubert-Roux, Anna Luiza Mendes Siqueira, Yang Bai, Carlos Afonso
Opublikowane w: Energy & Fuels, Numer 34/8, 2020, Strona(/y) 9296-9303, ISSN 0887-0624
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Binary Simplification as an Effective Tool in MetabolomicsData Analysis

Autorzy: Traquete, F.; Luz, J.; Cordeiro, C.; Sousa Silva, M.; Ferreira, A.E.N
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Infrared Multiple Photon Dissociation Spectroscopy of Protonated Cyameluric Acid

Autorzy: """Olmedo, Walter E. Jimenez, Liliana B. Cruz-Ortiz, Andres F. Maitre, Philippe Pino, Gustavo A. Rossa, Maximiliano"""
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Wydawca: American Chemical Society
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Structural Insights from Tandem Mass Spectrometry, Ion Mobility-Mass Spectrometry, and Infrared/Ultraviolet Spectroscopy on Sphingonodin I: Lasso vs Branched-Cyclic Topoisomers

Autorzy: Dit Fouque, Kevin Jeanne Scutelnic, Valeriu Hegemann, Julian D. Rebuffat, Sylvie Maitre, Philippe Rizzo, Thomas R. Fernandez-Lima, Francisco
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Wydawca: American Chemical Society
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Ion Mobility Mass Spectrometry for Structural Elucidation of Petroleum Compounds

Autorzy: Acter, T.; Uddin, N.; Cho, E.; Riches, E.; Giusti, P.; Afonso, C.; Kim, S.
Opublikowane w: TrAC Trends in Analytical Chemistry, 2022, ISSN 0000-0000
Wydawca: Elsevier
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Xylonolactonase from Caulobacter crescentus Is a MononuclearNonheme Iron Hydrolase

Autorzy: Pääkkönen, J., Penttinen, L., Andberg, M., Koivula, A., Hakulinen, N., Rouvinen, J., & Jänis, J.
Opublikowane w: Biochemistry, Numer 00000000, 2021, ISSN 0000-0000
Wydawca: American Chemical Society
DOI: 10.1021/acs.biochem.1c00249

Fourier transform ion cyclotron resonance mass spectrometry for the analysis of molecular composition and batch‐to‐batch consistency of plant‐derived polyphenolic ligands developed for biomedical application

Autorzy: Alexander Ya. Zherebker, Gleb D. Rukhovich, Oleg N. Kharybin, Elena I. Fedoros, Irina V. Perminova, Evgeny N. Nikolaev
Opublikowane w: Rapid Communications in Mass Spectrometry, Numer 34/18, 2020, ISSN 0951-4198
Wydawca: John Wiley & Sons Inc.
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Elusive intermediates in cisplatin reaction with target amino acids: Platinum(II)-cysteine complexes assayed by IR ion spectroscopy and DFT calculations

Autorzy: Corinti, Davide; Paciotti, Roberto; Coletti, Cecilia; Re, Nazzareno; Chiavarino, Barbara; Crestoni, Maria Elisa; Fornarini, Simonetta
Opublikowane w: Journal of Inorganic Biochemistry, 2022, ISSN 0000-0000
Wydawca: Science Direct
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Characterization and Valorization of ‘Sulmona Red Garlic’ Peels and Small Bulbs

Autorzy: Cairone, Francesco; Cesa, Stefania; Maccelli, Alessandro; Crestoni, Maria Elisa; Menghini, Luigi; Carradori, Simone; Marinacci, Beatrice; Gallorini, Marialucia; Elsallabi, Osama; Pesce, Mirko; Patruno, Antonia
Opublikowane w: Antioxidants, 2022, Strona(/y) -, ISSN 0000-0000
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Conserved cysteine dioxidation enhances membrane interaction of human Cl − intracellular channel 5

Autorzy: Alisa Ferofontov, Pavla Vankova, Petr Man, Moshe Giladi, Yoni Haitin
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Thermokinetic Analysis of Protein Subunit Exchange by Variable-Temperature Native Mass Spectrometry

Autorzy: Senthil K. Thangaraj, Salman James, Juha Rouvinen, Janne Jänis
Opublikowane w: Biochemistry, Numer 58/50, 2019, Strona(/y) 5025-5029, ISSN 0006-2960
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Graph Properties of Mass-Difference Networks for Profiling and Discrimination in Untargeted Metabolomics

Autorzy: Traquete, F., Luz, J., Cordeiro, C., Sousa Silva, M.*, Ferreira
Opublikowane w: Frontiers in Molecular Biosciences, 2022, ISSN 0000-0000
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Impact of Thermal Stress on Abrasive Dust from a Carbon Fiber-Reinforced Concrete Composite

Autorzy: Koch, Arne; Friederici, Lukas; Fiala, Petra; Springer, Armin; Di Bucchianico, Sebastiano; Stintz, Michael; Frank, Marcus; Rüger, Christopher Paul; Streibel, Thorsten; Zimmermann, Ralf
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Cation-π Interactions between a Noble Metal and a Polyfunctional Aromatic Ligand: Ag+(benzylamine)

Autorzy: Davide Corinti, Alessandro Maccelli, Barbara Chiavarino, Markus Schütz, Aude Bouchet, Otto Dopfer, Maria Elisa Crestoni, Simonetta Fornarini
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Influence of cross-linker polarity on selectivity towards lysine side chains

Autorzy: Zdeněk Kukačka; Jan Fiala; Petr Novák
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Nanoemulsions of Satureja montana Essential Oil: Antimicrobial and Antibiofilm Activity against Avian Escherichia coli Strains

Autorzy: Federica Rinaldi, Linda Maurizi, Antonietta Lucia Conte, Massimiliano Marazzato, Alessandro Maccelli, Maria Elisa Crestoni, Patrizia Nadia Hanieh, Jacopo Forte, Maria Pia Conte, Carlo Zagaglia, Catia Longhi, Carlotta Marianecci, Maria Grazia Ammendolia, Maria Carafa
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Adaptive pixel mass recalibration for mass spectrometry imaging based on locally endogenous biological signals

Autorzy: Raphaël La Rocca, Christopher Kune, Mathieu Tiquet, Lachlan Stuart, Gauthier Eppe, Theodore Alexandrov, Edwin De Pauw, Loïc Quinton
Opublikowane w: 2020
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Phase relationships in two-dimensional mass spectrometry

Autorzy: Maria A. van Agthoven; Marc-André Delsuc; Tomos E. Morgan; David P. A. Kilgour; David P. A. Kilgour; Alice M. Lynch; Alice M. Lynch; Peter B. O’Connor; Mark P. Barrow; Christopher A. Wootton; Lionel Chiron
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Deconvolution of isotopic pattern in 2D-FTICR Mass Spectrometry of peptides and proteins

Autorzy: Duciel, Laura; Cherni, Afef; Delsuc, Marc-André
Opublikowane w: Numer 5, 2019, ISSN 0000-0000
Wydawca: eprint arXiv:1906.06218

The chemical universe of wine revealed by FT-ICR-MS metabolomic

Autorzy: Sousa Silva, M. & Cordeiro. C.
Opublikowane w: Sociedad Española de Espectrometría de Masas - XRSEEM, 2022, Strona(/y) -
Wydawca: Sociedad Española de Espectrometría de Masas - XRSEEM

Comprehensive high resolution mass spectrometric evolved gas analysis in the context of Petroleomics: Analysis of bitumen, heavy crude oils and asphaltenes

Autorzy: Christopher P. Rüger, Anika Neumann, Christoph Grimmer, Uwe Käfer, Thomas Gröger, Thorsten Streibel, Martin Sklorz, Ralf Zimmermann
Opublikowane w: EFTMS Conference, Numer 23.4. - 27.4.2018, 2018
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Comprehensive mass spectrometric evolved gas analysis in the context of petroleomics

Autorzy: Christopher P. Rüger, Anika Neumann, Christoph Grimmer, Uwe Käfer, Martin Sklorz, Ralf Zimmermann
Opublikowane w: DGMS Conference, Numer 11.3. - 15.3.2018, 2018
Wydawca: -

Comparison of Xe/Kr atmospheric pressure photo ionisation (APPI) to atmospheric pressure chemical ionisation for the analysis of complex mixtures

Autorzy: Anika Neumann, Christopher P. Rüger, Martin Sklorz, Ralf Zimmermann
Opublikowane w: DGMS Conference, Numer 11.3. - 15.3.2018, 2018
Wydawca: -

Comparison of Xe/Kr atmospheric pressure photo ionisation (APPI) to atmospheric pressure chemical ionisation for the analysis of complex petrochemical mixtures

Autorzy: Anika Neumann, Christopher P. Rüger, Martin Sklorz, Ralf Zimmermann
Opublikowane w: EFTMS Conference, Numer 23.4. - 27.4.2018, 2018
Wydawca: -

"""Structural investigation of natural organic matter using direct fractionation and selective isotopic labeling coupled to fticr ms"" "

Autorzy: """Alexander Zherebker, Yury Kostyukevich, Evgeny Shirshin, Oleg Kharybin, Alexey Kononikhin, Irina V Perminova, Evgeny Nikolaev"" "
Opublikowane w: IMSC Conference, Numer 26.08-31.08 2018, 2018
Wydawca: -

Ion source multiplexing on a single mass spectrometer

Autorzy: Yury Kostyukevich, Alexander Zherebker, Evgeny Nikolaev
Opublikowane w: IMSC Conference, Numer 26.08-31.08 2018, 2018
Wydawca: -

Characterization of hydroxymethylbilane synthase and its acute intermittent porphyria associated mutants by Fourier transform ion cyclotron resonance mass spectrometry

Autorzy: Janne Jänis, Helene J. Bustad, Juha Kallio, Mikko Laitaoja, Karen Toska, Inari Kursula and Aurora Martinez
Opublikowane w: Proceedings of the ASMS conference on Mass Spectrometry, Numer 2018, 2018
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A GA for non-uniform sampling harmonic analysis

Autorzy: Ulviya Abdulkarimova, Igor Santos Peretta, Anna Ouskova Leonteva, Younes Monjid, Rabih Amhaz, Marc Haegelin, Pierre Collet, Christian Rolando
Opublikowane w: Proceedings of the 2020 Genetic and Evolutionary Computation Conference Companion, 2020, Strona(/y) 253-254, ISBN 9781450371278
Wydawca: ACM
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Unraveling compound taxonomy through artificial inteligence

Autorzy: Henrique Silva
Opublikowane w: 2022, Strona(/y) -, ISSN 0000-0000
Wydawca: FCUL

Développements d’algorithmes d'apprentissage machine pour l'analyse automatique de données biophysiques de haute résolution.Not already published. PhD thesis defended on September 23, 2022.The manuscript will be made public soon by the university.

Autorzy: Laura Duciel
Opublikowane w: 2022, Strona(/y) -
Wydawca: -

The assembly of protein complexes in vivo: Pathways and stability

Autorzy: Mariana Louro
Opublikowane w: 2022
Wydawca: FCUL

Magnetic resonance mass spectrometry: From proteomics to protein complexes

Autorzy: Cordeiro, C. & Sousa Silva, M.
Opublikowane w: Sociedad Española de Espectrometría de Masas - XRSEEM, 2022, Strona(/y) -
Wydawca: Sociedad Española de Espectrometría de Masas - XRSEEM

Estudo de N‐alquilamino 2’‐,3’‐ e 4’‐cloropropriofenonas por GC‐MS/MS e FT-ICR

Autorzy: Daniela Pinto
Opublikowane w: 2022, Strona(/y) -, ISSN 0000-0000
Wydawca: FCUL

The invisible world of fingerprints revealed by mass spectrometry

Autorzy: Mariana Pereira
Opublikowane w: 2022, Strona(/y) -
Wydawca: FCUL

The assembly of protein complexes in vivo: Pathways and stability

Autorzy: Mariana Louro
Opublikowane w: UNIVERSIDADE DE LISBOA, 2022
Wydawca: UNIVERSIDADE DE LISBOA

Metabolomics in Crop Research – Current and Emerging Methodologies

Autorzy: Sousa Silva, M., Figueiredo, A., Roessner, U., Cordeiro, C.,
Opublikowane w: 2019, ISBN 9782889631582
Wydawca: Frontiers in Plant Science
DOI: 10.3389/978-2-88963-158-2

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