CORDIS oferuje możliwość skorzystania z odnośników do publicznie dostępnych publikacji i rezultatów projektów realizowanych w ramach programów ramowych HORYZONT.
Odnośniki do rezultatów i publikacji związanych z poszczególnymi projektami 7PR, a także odnośniki do niektórych konkretnych kategorii wyników, takich jak zbiory danych i oprogramowanie, są dynamicznie pobierane z systemu OpenAIRE .
Rezultaty
The report will: i) shortly introduce the role of nutrients and especially nitrogen for crop performancesii) shortly describe the plant material and methodology used for root system assessment iii) describe the data collection and methodology for transcriptomic analysis iv) establish a list of potential candidates for root system plasticity in response to nitrogen deprivation/supplyiv) shortly discuss the implications of the results for the role of nitrogen in coffee and cocoa root system architectureRelated to Task 1.2
Intital Data management plan (odnośnik otworzy się w nowym oknie)The DMP report will be updated on a regular basis in order to have a clear policy on:i) Which data is stored and in which formats;ii) How to make the data FAIR (Findable, Accessible, Interoperable and Re-usable);iii)Ethical aspects (privacy and confidentiality).The DMP will provide details on the type of data collated, collected and used, as well as the methodology and standards applied to process, monitor and store the said data. The DMP will also specify the required associated metadata, and the legal documents related to access and benefit sharing according to Nagoya protocol and to biosecurity and specimen traceability. In accordance with the EU guidelines and FAIR principles, data will be submitted to open repositories/projects, either general or topic relevant. The DMP will explain which research data generated will be made open. More details are found in part 1.2.6 of the DoA.Related to Task 6.1
Intermediary Data Management Plan (odnośnik otworzy się w nowym oknie)The DMP report will be updated at M36 in order to have a clear policy on:i) Which data is stored and in which formats;ii) How to make the data FAIR (Findable, Accessible, Interoperable and Re-usable);iii)Ethical aspects (privacy and confidentiality).The DMP will provide details on the type of data collated, collected and used, as well as the methodology and standards applied to process, monitor and store the said data. The DMP will also specify the required associated metadata, and the legal documents related to access and benefit sharing according to Nagoya protocol and to biosecurity and specimen traceability. In accordance with the EU guidelines and FAIR principles, data will be submitted to open repositories/projects, either general or topic relevant. The DMP will explain which research data generated will be made open. More details are found in part 1.2.6 of the DoA.Related to Task 6.1
Report of identification of labelled exudates in soil for coffee (odnośnik otworzy się w nowym oknie)This report will:i)Describe the protocols set up for the labelling of coffee root exudatesii)identify and quantify the exudates emitted by coffee plantsiii)discuss the results in the context of the potential roles of these exudates in the formation and maintenance of the coffee root microbiomeRelated to Task 2.1
Report on BOLERO's ethical considerations, including OSS (odnośnik otworzy się w nowym oknie)The report will:1)Explore advantages and disadvantages of using open-source principles relative to other models to promote innovation and just distribution of benefits in sectors relying on common resources (e.g. genetic materials)2)A review of the existing initiatives that are experimenting with open-source principles for accessing, exchanging and distributing germplasm and seeds3)A discussion of opportunities and challenges of applying open-source principles for innovation in association with coffee and cocoa seedsA proposal for open-source licences co-developed with relevant stakeholders adapted to actors, regulations and practices within coffee and cocoa networksRelated to Task 6.5
Images' analysis report for root and shoot traits over time of cocoa and coffee genotypes grown in root pots under contrasting N conditions (odnośnik otworzy się w nowym oknie)The report will: i) shortly introduce the role of nutrients and especially nitrogen for crop performancesii) shortly describe the plant material and methodology used for root system assessment iii) describe the data collection and images analysis tools iv) shortly discuss the implications of the results for the role of nitrogen in coffee and cocoa root system architectureRelated to Task 1.2
Report on agronomic performance of grafted and non-grafted Robusta coffee (odnośnik otworzy się w nowym oknie)The report will: i) shortly introduce the role of grafting in coffee for crop performance,ii) describe the study area and farming context of the 30 grafted and 40 non-grafted coffee farms in the provinces of Gia Lai, Dak Lak, Dak Nong and Lam dong, iii) outline the data collection methodology incl. the agronomic parameters and approach to data analysis, iv) present in quantitative terms and with figures the results of the agronomic performance of grafted coffee compared with non-grafted coffee; and v) shortly discuss the implications of the findings for the role of grafted coffee in Vietnam and in general. Related to Task 5.1
Table of grafting compatibility between species (odnośnik otworzy się w nowym oknie)The report will: i) shortly introduce the role of grafting in coffee for crop performanceii) shortly describe the plant material and protocol used for graftingiii) establish a table summarizing the various grafting motives testediv) shortly discuss the importance of the results for the role of compatibility in coffeeRelated to Task 1.5
Report on taxonomic microbiome profile analyses for all coffee and cocoa samples (odnośnik otworzy się w nowym oknie)The report will: i)introduce the role of the root microbiome in plant growth and health; ii)describe the plant material, protocols and methods used for root microbiome sampling for coffee and cocoa plants;iii)describe the taxonomic microbiome profile analysis for coffee and cocoa plants;iv)discuss the results and the potential implications of the results for future microbiome-assisted coffee and cocoa cultivationRelated to Task 2.2
Report on the creation of 300 Robusta progenies and 21 cocoa progenies for grafting plant production (odnośnik otworzy się w nowym oknie)The report will: i) shortly introduce the genetic diversity used to create the populationii) shortly describe the methodology for progenies creationiii) report in a table the progenies obtained, and the limitation faced during the creationiv) shortly discuss the potentiality of this new population created, and its use for rootstock breedingRelated to Task 4.1
Report on assembled pangenome for coffee and genome of wild cocoa species (odnośnik otworzy się w nowym oknie)This report will:i)Provide store data about presence / absence of genes, gene copy numbers, and chromosomal rearrangementsii)Consolidate data available in the coffee genome hubiii)Characterize the structural variants across coffee accessions and pan-genome assemblyRelated to Task 3.1
Images' analysis report for shoot and root traits over time of coffee and cocoa grown in rhizotrons (odnośnik otworzy się w nowym oknie)The report will: i) shortly introduce the role of root system architecture for plant development and adaptation,ii) shortly describe the plant material and methodology used for root system assessment iii) describe the data collection and images analysis tools iv) shortly discuss the implications of the results for the role of root system for coffee and cocoaRelated to Task 1.1
The database will provide:i)tools for describing in the same way the experiments performed in all laboratories involved in Boleroii)a space for storing all data generatediii)tools for mining and uploading relevant datasets to answer specific questionsRelated to Task 3.1
The demonstration will include:i)Machine learning models to predict microbiome composition using omics data from roots as predictors. The models will employ state-of-the-art multi-trait regression approaches based on regularization techniques.ii)Variance explained by the derived models for individual microbes as well as their composition.Related to Task 3.3
Publikacje
Autorzy:
David Hobby; Hao Tong; Marc Heuermann; Alain J. Mbebi; Roosa A. E. Laitinen; Matteo Dell’Acqua; Thomas Altmann; Zoran Nikoloski
Opublikowane w:
Nature Plants, 2025, ISSN 2055-0278
Wydawca:
Springer nature
DOI:
10.1038/S41477-025-01986-Y
Autorzy:
Alain J. Mbebi; Facundo Mercado; David Hobby; Hao Tong; Zoran Nikoloski
Opublikowane w:
Briefings in Bioinformatics, 2025, ISSN 1477-4054
Wydawca:
Oxford University press
DOI:
10.1101/2025.03.05.641610
Wyszukiwanie danych OpenAIRE...
Podczas wyszukiwania danych OpenAIRE wystąpił błąd
Brak wyników