High Throughput Systematic Single Cell Genomics using Micro/Nano-Fluidic Chips for Extracting, Pre-analysing, Selecting and Preparing Sequence-ready DNA

Publikacje

Publikacje za pośrednictwem OpenAIRE (11)

Sequencing Metrics of Human Genomes Extracted from Single Cancer Cells Individually Isolated in a Valveless Microfluidic Device

Autorzy: Marie, Rodolphe; Pødenphant, Marie; Koprowska, Kamila; Bærlocher, Loic; Vulders, Roland C.M.; Wilding, Jennifer; Ashley, Neil; McGowan, Simon J.; van Strijp, Dianne; van Hemert, Freek; Olesen, Tom; Agersnap, Niels; Bilenberg, Brian; Sabatel, Celine; Schira, Julien; Kristensen, Anders; Bodmer, Walter; van der Zaag, Pieter J.; Mir, Kalim U.
Opublikowane w: Cold Spring Harbor Laboratory 2018
Stały identyfikator: Digital Object Identifier:10.1101/258780

Cellular polarity modulates drug resistance in primary colorectal cancers via orientation of the multidrug resistance protein ABCB1.

Autorzy: Ashley, Neil; Ouaret, Djamila; Bodmer, Walter F
Opublikowane w: John Wiley & Sons, Ltd The Journal of Pathology 2018
Stały identyfikator: PubMed Central ID:PMC6519031; PubMed ID:30306567; Digital Object Identifier:10.1002/path.5179

Efficient Excitation of Channel Plasmons in Tailored, UV-Lithography-Defined V-Grooves

Autorzy: Smith, Cameron L. C.; Thilsted, Anil H.; Garcia-Ortiz, Cesar E.; Radko, Ilya P.; Marie, Rodolphe; Jeppesen, Claus; Vannahme, Christoph; Bozhevolnyi, Sergey I.; Kristensen, Anders
Opublikowane w: American Chemical Society (ACS) Nano Letters 2014
Stały identyfikator: Digital Object Identifier:10.1021/nl5002058; PubMed Central ID:PMC3964729; PubMed ID:24524631

Refractive index dispersion sensing using an array of photonic crystal resonant reflectors

Autorzy: Pétur Gordon Hermannsson; Anders Kristensen; Kristian Tølbøl Sørensen; Christoph Vannahme; Cameron L. C. Smith
Stały identyfikator: Digital Object Identifier:10.1063/1.4928548

Complete sequence-based pathway analysis by differential on-chip DNA and RNA extraction from a single cell

Autorzy: Anders Kristensen; M. A. van Driel; Rodolphe Marie; Kalim U. Mir; Marie Pødenphant; Roland C. M. Vulders; D. van Strijp; Thomas Steen Hansen; Wim Verhaegh; Tom Olesen; P. J. van der Zaag; Loïc Baerlocher; Julien Schira; Nicholas A. Larsen
Opublikowane w: Nature Publishing Group van Strijp , D , Vulders , R C M , Larsen , N A , Schira , J , Baerlocher , L , van Driel , M A , Jensen , M P , Hansen , T S , Kristensen , A , Mir , K U , Olesen , T , Verhaegh , W F J , Marie , R & van der Zaag , P J 2017 , ' Complete sequence-based pathway analysis by differential on-chip DNA and RNA extraction from a single cell ' , Scientific Reports , vol. 7 , no. 1 , 11030 . https://doi.org/10.1038/s41598-017-10704-4 2017
Stały identyfikator: PubMed Central ID:PMC5591254; PubMed ID:28887473; Digital Object Identifier:10.1038/s41598-017-10704-4

Nanofluidic devices towards single DNA molecule sequence mapping.

Autorzy: Rodolphe Marie; Anders Kristensen
Opublikowane w: Wiley Journal of Biophotonics; Vol 5 2012
Stały identyfikator: Digital Object Identifier:10.1002/jbio.201200050

How to determine local stretching and tension in a flow-stretched DNA molecule

Autorzy: Jonas Nyvold Pedersen; Anders Kristensen; Henrik Flyvbjerg; Rodolphe Marie
Opublikowane w: American Physical Society (APS) 2016
Stały identyfikator: Digital Object Identifier:10.1103/physreve.93.042405

Photothermal Transport of DNA in Entropy-Landscape Plasmonic Waveguides

Autorzy: Tomas Hugh Youngman; Jonas Nyvold Pedersen; Rodolphe Marie; Cameron L. C. Smith; Nicolai A. Michaelsen; Julia Cathrine Dyrnum; Anders Kristensen; Anil Haraksingh Thilsted
Opublikowane w: American Chemical Society (ACS) Smith , C , Thilsted , A H , Pedersen , J N , Youngman , T H , Dyrnum , J C , Michaelsen , N A , Marie , R & Kristensen , A 2017 , ' Photothermal Transport of DNA in Entropy-Landscape Plasmonic Waveguides ' , A C S Nano , pp. 4553-4563 . https://doi.org/10.1021/acsnano.6b08563 2017
Stały identyfikator: Digital Object Identifier:10.1021/acsnano.6b08563

How to connect time-lapse recorded trajectories of motile microorganisms with dynamical models in continuous time

Autorzy: Pedersen, Jonas Nyvold; Li, Liang; Gradinaru, Cristian; Austin, Robert H.; Cox, Edward C.; Flyvbjerg, Henrik
Opublikowane w: American Physical Society (APS) Pedersen , J N , Li , L , Gradinaru , C , Austin , R H , Cox , E C & Flyvbjerg , H 2016 , ' How to connect time-lapse recorded trajectories of motile microorganisms with dynamical models in continuous time ' , Physical Review E , vol. 94 , no. 6 , 062401 . https://doi.org/10.1103/PhysRevE.94.062401 2016
Stały identyfikator: Digital Object Identifier:10.1103/physreve.94.062401

Concentrating and labeling genomic DNA in a nanofluidic array

Autorzy: Marie, Rodolphe; Pedersen, Jonas N.; Mir, Kalim U.; Bilenberg, Brian; Kristensen, Anders
Stały identyfikator: Digital Object Identifier:10.1039/c7nr06016e

Integrated view of genome structure and sequence of a single DNA molecule in a nanofluidic device

Autorzy: David L.V. Bauer; Emanuela V. Volpi; Rodolphe Marie; Kristian Hagsted Rasmussen; Kalim U. Mir; Anders Kristensen; Mohammed Yusuf; Mohammed Yusuf; Henrik Flyvbjerg; Jonas Nyvold Pedersen
Stały identyfikator: PubMed Central ID:PMC3612670; PubMed ID:23479649; Digital Object Identifier:10.1073/pnas.1214570110