Readout of DNA methylation

Publicaciones

A genome-scale map of DNA methylation turnover identifies site-specific dependencies of DNMT and TET activity

Autores: Paul Adrian Ginno, Dimos Gaidatzis, Angelika Feldmann, Leslie Hoerner, Dilek Imanci, Lukas Burger, Frederic Zilbermann, Antoine H. F. M. Peters, Frank Edenhofer, Sébastien A. Smallwood, Arnaud R. Krebs, Dirk Schübeler
Publicado en: Nature Communications, Edición 11/1, 2020, ISSN 2041-1723
Editor: Nature Publishing Group
DOI: 10.1038/s41467-020-16354-x

Mechanisms of OCT4-SOX2 motif readout on nucleosomes

Autores: Alicia K. Michael, Ralph S. Grand, Luke Isbel, Simone Cavadini, Zuzanna Kozicka, Georg Kempf, Richard D. Bunker, Andreas D. Schenk, Alexandra Graff-Meyer, Ganesh R. Pathare, Joscha Weiss, Syota Matsumoto, Lukas Burger, Dirk Schübeler, Nicolas H. Thomä
Publicado en: Science, Edición 368/6498, 2020, Página(s) 1460-1465, ISSN 0036-8075
Editor: American Association for the Advancement of Science
DOI: 10.1126/science.abb0074

Molecular Co-occupancy Identifies Transcription Factor Binding Cooperativity In Vivo

Autores: Can Sönmezer, Rozemarijn Kleinendorst, Dilek Imanci, Guido Barzaghi, Laura Villacorta, Dirk Schübeler, Vladimir Benes, Nacho Molina, Arnaud Regis Krebs
Publicado en: Molecular Cell, Edición 81/2, 2021, Página(s) 255-267.e6, ISSN 1097-2765
Editor: Cell Press
DOI: 10.1016/j.molcel.2020.11.015

CG dinucleotides enhance promoter activity independent of DNA methylation

Autores: Dominik Hartl, Arnaud R. Krebs, Ralph S. Grand, Tuncay Baubec, Luke Isbel, Christiane Wirbelauer, Lukas Burger, Dirk Schübeler
Publicado en: Genome Research, Edición 29/4, 2019, Página(s) 554-563, ISSN 1088-9051
Editor: Cold Spring Harbor Laboratory Press
DOI: 10.1101/gr.241653.118

Binding of high mobility group A proteins to the mammalian genome occurs as a function of AT-content

Autores: Colombo, Daniele F; Burger, Lukas; Baubec, Tuncay; Schübeler, Dirk
Publicado en: PLoS Genetics, Edición 1, 2017, ISSN 1553-7404
Editor: Nick Gilbert, Edinburgh Cancer Centre
DOI: 10.5167/uzh-144792

Cis-regulatory landscapes of four cell types of the retina

Autores: Dominik Hartl, Arnaud R. Krebs, Josephine Jüttner, Botond Roska, Dirk Schübeler
Publicado en: Nucleic Acids Research, Edición 45/20, 2017, Página(s) 11607-11621, ISSN 0305-1048
Editor: Oxford University Press
DOI: 10.1093/nar/gkx923

Cell cycle-resolved chromatin proteomics reveals the extent of mitotic preservation of the genomic regulatory landscape

Autores: Paul Adrian Ginno, Lukas Burger, Jan Seebacher, Vytautas Iesmantavicius, Dirk Schübeler
Publicado en: Nature Communications, Edición 9/1, 2018, ISSN 2041-1723
Editor: Nature Publishing Group
DOI: 10.1038/s41467-018-06007-5

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