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Structure function relationships of the phyllosphere microbiota

Publicaciones

Bipartite interactions, antibiotic production and biosynthetic potential of the Arabidopsis leaf microbiome

Autores: Eric J. N. Helfrich, Christine M. Vogel, Reiko Ueoka, Martin Schäfer, Florian Ryffel, Daniel B. Müller, Silke Probst, Markus Kreuzer, Jörn Piel, Julia A. Vorholt
Publicado en: Nature Microbiology, Issue 3/8, 2018, Page(s) 909-919, ISSN 2058-5276
Editor: Springer Nature
DOI: 10.1038/s41564-018-0200-0

Synthetic microbiota reveal priority effects and keystone strains in the Arabidopsis phyllosphere

Autores: Charlotte I. Carlström, Christopher M. Field, Miriam Bortfeld-Miller, Barbara Müller, Shinichi Sunagawa, Julia A. Vorholt
Publicado en: Nature Ecology & Evolution, Issue 3/10, 2019, Page(s) 1445-1454, ISSN 2397-334X
Editor: Springer Nature
DOI: 10.1038/s41559-019-0994-z

Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics software

Autores: Alexander Sczyrba, Peter Hofmann, Peter Belmann, David Koslicki, Stefan Janssen, Johannes Dröge, Ivan Gregor, Stephan Majda, Jessika Fiedler, Eik Dahms, Andreas Bremges, Adrian Fritz, Ruben Garrido-Oter, Tue Sparholt Jørgensen, Nicole Shapiro, Philip D Blood, Alexey Gurevich, Yang Bai, Dmitrij Turaev, Matthew Z DeMaere, Rayan Chikhi, Niranjan Nagarajan, Christopher Quince, Fernando Meyer, Monika
Publicado en: Nature Methods, Issue 14/11, 2017, Page(s) 1063-1071, ISSN 1548-7091
Editor: Nature Publishing Group
DOI: 10.1038/nmeth.4458

Establishing Causality: Opportunities of Synthetic Communities for Plant Microbiome Research

Autores: Julia A. Vorholt, Christine Vogel, Charlotte I. Carlström, Daniel B. Müller
Publicado en: Cell Host & Microbe, Issue 22/2, 2017, Page(s) 142-155, ISSN 1931-3128
Editor: Cell Press
DOI: 10.1016/j.chom.2017.07.004

Genomic features of bacterial adaptation to plants

Autores: Asaf Levy, Isai Salas Gonzalez, Maximilian Mittelviefhaus, Scott Clingenpeel, Sur Herrera Paredes, Jiamin Miao, Kunru Wang, Giulia Devescovi, Kyra Stillman, Freddy Monteiro, Bryan Rangel Alvarez, Derek S. Lundberg, Tse-Yuan Lu, Sarah Lebeis, Zhao Jin, Meredith McDonald, Andrew P. Klein, Meghan E. Feltcher, Tijana Glavina Rio, Sarah R. Grant, Sharon L. Doty, Ruth E. Ley, Bingyu Zhao, Vittorio Ventu
Publicado en: Nature Genetics, Issue 50/1, 2018, Page(s) 138-150, ISSN 1061-4036
Editor: Nature Publishing Group
DOI: 10.1038/s41588-017-0012-9

The Plant Microbiota: Systems-Level Insights and Perspectives

Autores: Daniel B. Müller, Christine Vogel, Yang Bai, Julia A. Vorholt
Publicado en: Annual Review of Genetics, Issue 50/1, 2016, Page(s) 211-234, ISSN 0066-4197
Editor: Annual Reviews, Inc.
DOI: 10.1146/annurev-genet-120215-034952

Systems-level Proteomics of Two Ubiquitous Leaf Commensals Reveals Complementary Adaptive Traits for Phyllosphere Colonization

Autores: Daniel B. Müller, Olga T. Schubert, Hannes Röst, Ruedi Aebersold, Julia A. Vorholt
Publicado en: Molecular & Cellular Proteomics, Issue 15/10, 2016, Page(s) 3256-3269, ISSN 1535-9476
Editor: American Society for Biochemistry and Molecular Biology Inc.
DOI: 10.1074/mcp.M116.058164

The Arabidopsis leaf transcriptome reveals distinct but also overlapping responses to colonization by phyllosphere commensals and pathogen infection with impact on plant health

Autores: Christine Vogel, Natacha Bodenhausen, Wilhelm Gruissem, Julia A. Vorholt
Publicado en: New Phytologist, Issue 212/1, 2016, Page(s) 192-207, ISSN 0028-646X
Editor: Blackwell Publishing Inc.
DOI: 10.1111/nph.14036

Functional overlap of the Arabidopsis leaf and root microbiota

Autores: Yang Bai, Daniel B. Müller, Girish Srinivas, Ruben Garrido-Oter, Eva Potthoff, Matthias Rott, Nina Dombrowski, Philipp C. Münch, Stijn Spaepen, Mitja Remus-Emsermann, Bruno Hüttel, Alice C. McHardy, Julia A. Vorholt, Paul Schulze-Lefert
Publicado en: Nature, Issue 528/7582, 2015, Page(s) 364-369, ISSN 0028-0836
Editor: Nature Publishing Group
DOI: 10.1038/nature16192

A modular atomic force microscopy approach reveals a large range of hydrophobic adhesion forces among bacterial members of the leaf microbiota

Autores: Maximilian Mittelviefhaus, Daniel B. Müller, Tomaso Zambelli, Julia A. Vorholt
Publicado en: The ISME Journal, Issue 13/7, 2019, Page(s) 1878-1882, ISSN 1751-7362
Editor: Nature Publishing Group
DOI: 10.1038/s41396-019-0404-1

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