Function and Evolution of Attack and Response Strategies during Allelopathy in Plants

Publikacje

ARADEEPOPSIS, an Automated Workflow for Top-View Plant Phenomics using Semantic Segmentation of Leaf States

Autorzy: Patrick Huether, Niklas Schandry, Katharina Jandrasits, Ilja Bezrukov, Claude Becker
Opublikowane w: The Plant Cell, Numer 32, 2020, Strona(/y) 3674-3688, ISSN 1532-298X
Wydawca: Oxford University Press
DOI: 10.1105/tpc.20.00318

Genetic and environmental drivers of large-scale epigenetic variation in Thlaspi arvense

Autorzy: Dario Galanti; Daniela Ramos-Cruz; Adam Nunn; Isaac Rodríguez-Arévalo; J.F. Scheepens; Claude Becker; Oliver Bossdorf
Opublikowane w: PLoS Genetics, Numer 2, 2022, ISSN 1553-7404
Wydawca: PLOS
DOI: 10.1371/journal.pgen.1010452

Chromosome-level Thlaspi arvense genome provides new tools for translational research and for a newly domesticated cash cover crop of the cooler climates

Autorzy: Adam Nunn, Isaac Rodríguez-Arévalo, Zenith Tandukar, Katherine Frels, Adrián Contreras-Garrido, Pablo Carbonell-Bejerano, Panpan Zhang, Daniela Ramos Cruz, Katharina Jandrasits, Christa Lanz, Anthony Brusa, Marie Mirouze, Kevin Dorn, David W Galbraith, Brice A. Jarvis, John C. Sedbrook, Donald L. Wyse, Christian Otto, David Langenberger, Peter F. Stadler, Detlef Weigel, M. David Marks, James A.
Opublikowane w: Plant Biotechnology Journal, 2022, ISSN 1467-7652
Wydawca: John Wiley & Sons Ltd
DOI: 10.1111/pbi.13775

The role of plant epigenetics in biotic interactions

Autorzy: Conchita Alonso, Daniela Ramos-Cruz, Claude Becker
Opublikowane w: New Phytologist, Numer 221/2, 2019, Strona(/y) 731-737, ISSN 0028-646X
Wydawca: Blackwell Publishing Inc.
DOI: 10.1111/nph.15408

Allelopathic Plants: Models for Studying Plant–Interkingdom Interactions

Autorzy: Niklas Schandry, Claude Becker
Opublikowane w: Trends in Plant Science, Numer 25/2, 2020, Strona(/y) 176-185, ISSN 1360-1385
Wydawca: Elsevier BV
DOI: 10.1016/j.tplants.2019.11.004

Transcriptional response of a target plant to benzoxazinoid and diterpene allelochemicals highlights commonalities in detoxification

Autorzy: Eva Knoch; Judit Kovács; Sebastian Deiber; Keisuke Tomita; Reshi Shanmuganathan; Núria Serra Serra; Kazunori Okada; Claude Becker; Niklas Schandry
Opublikowane w: BMC Plant Biology, Numer 2, 2022, ISSN 1471-2229
Wydawca: BioMed Central
DOI: 10.1186/s12870-022-03780-w

MethylScore, a pipeline for accurate and context-aware identification of differentially methylated regions from population-scale plant whole-genome bisulfite sequencing data

Autorzy: Patrick Hüther; Jörg Hagmann; Adam Nunn; Ioanna Kakoulidou; Rahul Pisupati; David Langenberger; Detlef Weigel; Frank Johannes; Sebastian J. Schultheiss; Claude Becker
Opublikowane w: Quantitative Plant Biology, Numer 3, 2022, ISSN 2632-8828
Wydawca: Cambridge University Press
DOI: 10.1017/qpb.2022.14

Plant-derived benzoxazinoids act as antibiotics and shape bacterial communities

Autorzy: Niklas Schandry, Katharaina Jandrasits, Ruben Garrido-Oter Claude Becker
Opublikowane w: bioRxiv, 2019
Wydawca: Cold Spring Harbor Laboratory Press
DOI: 10.1101/2021.01.12.425818

aradeepopsis: From images to phenotypic traits using deep transfer learning

Autorzy: Patrick Hüther, Niklas Schandry, Katharina Jandrasits, Ilja Bezrukov, Claude Becker
Opublikowane w: bioRxiv, 2020
Wydawca: Cold Spring Harbor Laboratory
DOI: 10.1101/2020.04.01.018192

MethylScore, a pipeline for accurate and context-aware identification of differentially methylated regions from population-scale plant WGBS data

Autorzy: Patrick Hüther, Jörg Hagmann, Adam Nunn, Ioanna Kakoulidou, Rahul Pisupati, David Langenberger, Detlef Weigel, Frank Johannes, Sebastian J. Schultheiss, Claude Becker
Opublikowane w: bioRxiv, 2022
Wydawca: Cold Spring Harbor Laboratory Press
DOI: 10.1101/2022.01.06.475031

Transcriptional response of a target plant to benzoxazinoid and diterpene allelochemicals highlights commonalities in detoxification

Autorzy: Eva Knoch, Judit Kovács, Sebastian Deiber, Reshi Shanmuganathan, Núria Serra Serra, Claude Becker, Niklas Schandry
Opublikowane w: bioRxiv, 2022
Wydawca: Cold Spring Harbor Laboratory Press
DOI: 10.1101/2022.02.21.480921

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