circular RNA Biology Training Network: from biogenesis to biomarkers

Risultati finali

Organization, execution and evaluation of training events completed

Organization execution and evaluation of training events completed

ESR'S thesis submitted

ESRS thesis submitted

Recruitment of 15 ESRs

Full set of event reports and publication list
Dissemination Toolkit

Project Website

Pubblicazioni

Widespread occurrence of circular RNA in eukaryotes

Autori: Irene Bozzoni
Pubblicato in: Nature Reviews Genetics, Numero 22/9, 2021, Pagina/e 550-551, ISSN 1471-0056
Editore: Nature Publishing Group
DOI: 10.1038/s41576-021-00375-3

The RNA-binding protein SFPQ preserves long-intron splicing and regulates circRNA biogenesis in mammals

Autori: Lotte Victoria Winther Stagsted, Eoghan Thomas O'Leary, Karoline Kragh Ebbesen, Thomas Birkballe Hansen
Pubblicato in: eLife, Numero 10, 2021, ISSN 2050-084X
Editore: eLife Sciences Publications
DOI: 10.7554/elife.63088

Linking the association between circRNAs and Alzheimer’s disease progression by multi-tissue circular RNA characterization

Autori: IJu Lo, Jamie Hill, Bjarni J. Vilhjálmsson, Jørgen Kjems
Pubblicato in: RNA Biology, Numero 17/12, 2020, Pagina/e 1789-1797, ISSN 1547-6286
Editore: Landes Bioscience
DOI: 10.1080/15476286.2020.1783487

High-throughput RNA sequencing from paired lesional- and non-lesional skin reveals major alterations in the psoriasis circRNAome

Autori: Liviu-Ionut Moldovan, Thomas Birkballe Hansen, Morten Trillingsgaard Venø, Trine Line Hauge Okholm, Thomas Levin Andersen, Henrik Hager, Lars Iversen, Jørgen Kjems, Claus Johansen, Lasse Sommer Kristensen
Pubblicato in: BMC Medical Genomics, Numero 12/1, 2019, Pagina/e 1-17, ISSN 1755-8794
Editore: BioMed Central
DOI: 10.1186/s12920-019-0616-2

Past, present, and future of circ RNA s

Autori: Ines Lucia Patop, Stas Wüst, Sebastian Kadener
Pubblicato in: The EMBO Journal, Numero 38/16, 2019, Pagina/e 1-13, ISSN 0261-4189
Editore: Nature Publishing Group
DOI: 10.15252/embj.2018100836

Long non‐coding RNAs in motor neuron development and disease

Autori: Vamshidhar R. Vangoor, Andreia Gomes‐Duarte, R. Jeroen Pasterkamp
Pubblicato in: Journal of Neurochemistry, Numero 156/6, 2021, Pagina/e 777-801, ISSN 0022-3042
Editore: Blackwell Publishing Inc.
DOI: 10.1111/jnc.15198

Circular RNAs in cell differentiation and development

Autori: Gaia Di Timoteo, Francesca Rossi, Irene Bozzoni
Pubblicato in: Development, Numero 147/16, 2020, ISSN 0950-1991
Editore: The Company of Biologists Ltd.
DOI: 10.1242/dev.182725

An in vivo strategy for knockdown of circular RNAs

Autori: Nagarjuna Reddy Pamudurti, Ines Lucia Patop, Aishwarya Krishnamoorthy, Reut Ashwal-Fluss, Osnat Bartok, Sebastian Kadener
Pubblicato in: Cell Discovery, Numero 6/1, 2020, Pagina/e 11;6:52, ISSN 2056-5968
Editore: Springer Nature
DOI: 10.1038/s41421-020-0182-y

A comprehensive analysis of coding and non-coding transcriptomic changes in cutaneous squamous cell carcinoma

Autori: Kunal Das Mahapatra, Lorenzo Pasquali, Jonas Nørskov Søndergaard, Jan Lapins, István Balazs Nemeth, Eszter Baltás, Lajos Kemény, Bernhard Homey, Liviu-Ionut Moldovan, Jørgen Kjems, Claudia Kutter, Enikö Sonkoly, Lasse Sommer Kristensen, Andor Pivarcsi
Pubblicato in: Scientific Reports, Numero 10/1, 2020, Pagina/e 1-12, ISSN 2045-2322
Editore: Nature Publishing Group
DOI: 10.1038/s41598-020-59660-6

Design and application of circular RNAs with protein-sponge function

Autori: Silke Schreiner, Anna Didio, Lee-Hsueh Hung, Albrecht Bindereif
Pubblicato in: Nucleic Acids Research, Numero 48/21, 2020, Pagina/e 12326-12335, ISSN 0305-1048
Editore: Oxford University Press
DOI: 10.1093/nar/gkaa1085

Characterization of circular RNA transcriptomes in psoriasis and atopic dermatitis reveals disease‐specific expression profiles

Autori: Liviu I. Moldovan, Lam C. Tsoi, Uppala Ranjitha, Henrik Hager, Stephen Weidinger, Johann E. Gudjonsson, Jørgen Kjems, Lasse S. Kristensen
Pubblicato in: Experimental Dermatology, Numero 30/8, 2021, Pagina/e 1187-1196, ISSN 0906-6705
Editore: Blackwell Publishing Inc.
DOI: 10.1111/exd.14227

Methods to study circRNA-protein interactions

Autori: Corinna J. Ulshöfer, Christina Pfafenrot, Albrecht Bindereif, Tim Schneider
Pubblicato in: Methods, Numero Volume 195, 2021, ISSN 1046-2023
Editore: Academic Press
DOI: 10.1016/j.ymeth.2021.04.014

Remotely Produced and Axon-Derived Netrin-1 Instructs GABAergic Neuron Migration and Dopaminergic Substantia Nigra Development

Autori: Sara Brignani, Divya D.A. Raj, Ewoud R.E. Schmidt, Özge Düdükcü, Youri Adolfs, Anna A. De Ruiter, Mateja Rybiczka-Tesulov, Marieke G. Verhagen, Christiaan van der Meer, Mark H. Broekhoven, Juan A. Moreno-Bravo, Laurens M. Grossouw, Emilie Dumontier, Jean-François Cloutier, Alain Chédotal, R. Jeroen Pasterkamp
Pubblicato in: Neuron, Numero 107/4, 2020, Pagina/e 684-702.e9, ISSN 0896-6273
Editore: Cell Press
DOI: 10.1016/j.neuron.2020.05.037

circRNAs in Cancer

Autori: Ines Lucia Patop, Sebastian Kadener
Pubblicato in: Current Opinion in Genetics & Development, Numero 48, 2018, Pagina/e 121-127, ISSN 0959-437X
Editore: Elsevier BV
DOI: 10.1016/j.gde.2017.11.007

Single-Cell Transcriptomics Characterizes Cell Types in the Subventricular Zone and Uncovers Molecular Defects Impairing Adult Neurogenesis

Autori: Vera Zywitza, Aristotelis Misios, Lena Bunatyan, Thomas E. Willnow, Nikolaus Rajewsky
Pubblicato in: Cell Reports, Numero 25/9, 2018, Pagina/e 2457-2469.e8, ISSN 2211-1247
Editore: Cell Press
DOI: 10.1016/j.celrep.2018.11.003

CircVAMP3: A circRNA with a Role in Alveolar Rhabdomyosarcoma Cell Cycle Progression

Autori: Francesca Rossi, Alvaro Centrón-Broco, Dario Dattilo, Gaia Di Timoteo, Marco Guarnacci, Alessio Colantoni, Manuel Beltran Nebot, Irene Bozzoni
Pubblicato in: Genes, Numero 12/7, 2021, Pagina/e 985, ISSN 2073-4425
Editore: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/genes12070985

Modulation of circRNA Metabolism by m6A Modification

Autori: Gaia Di Timoteo, Dario Dattilo, Alvaro Centrón-Broco, Alessio Colantoni, Marco Guarnacci, Francesca Rossi, Danny Incarnato, Salvatore Oliviero, Alessandro Fatica, Mariangela Morlando, Irene Bozzoni
Pubblicato in: Cell Reports, Numero 31/6, 2020, Pagina/e 107641, ISSN 2211-1247
Editore: Cell Press
DOI: 10.1016/j.celrep.2020.107641

Circ-Hdgfrp3 shuttles along neurites and is trapped in aggregates formed by ALS-associated mutant FUS

Autori: Eleonora D’Ambra, Tiziana Santini, Erika Vitiello, Sara D’Uva, Valentina Silenzi, Mariangela Morlando, Irene Bozzoni
Pubblicato in: iScience, 2021, Pagina/e 103504, ISSN 2589-0042
Editore: Cell Press
DOI: 10.1016/j.isci.2021.103504

Enrichment of Circular RNA Expression Deregulation at the Transition to Recurrent Spontaneous Seizures in Experimental Temporal Lobe Epilepsy

Autori: Andreia Gomes-Duarte, Sebastian Bauer, Morten T. Venø, Braxton A. Norwood, David C. Henshall, Jørgen Kjems, Felix Rosenow, Vamshidhar R. Vangoor, R. Jeroen Pasterkamp
Pubblicato in: Frontiers in Genetics, Numero 12, 2021, Pagina/e 1-20, ISSN 1664-8021
Editore: Frontiers Media
DOI: 10.3389/fgene.2021.627907

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