circular RNA Biology Training Network: from biogenesis to biomarkers

Rezultaty

Organization, execution and evaluation of training events completed

Organization execution and evaluation of training events completed

ESR'S thesis submitted

ESRS thesis submitted

Recruitment of 15 ESRs

Full set of event reports and publication list
Dissemination Toolkit

Project Website

Publikacje

Widespread occurrence of circular RNA in eukaryotes

Autorzy: Irene Bozzoni
Opublikowane w: Nature Reviews Genetics, Numer 22/9, 2021, Strona(/y) 550-551, ISSN 1471-0056
Wydawca: Nature Publishing Group
DOI: 10.1038/s41576-021-00375-3

The RNA-binding protein SFPQ preserves long-intron splicing and regulates circRNA biogenesis in mammals

Autorzy: Lotte Victoria Winther Stagsted, Eoghan Thomas O'Leary, Karoline Kragh Ebbesen, Thomas Birkballe Hansen
Opublikowane w: eLife, Numer 10, 2021, ISSN 2050-084X
Wydawca: eLife Sciences Publications
DOI: 10.7554/elife.63088

Linking the association between circRNAs and Alzheimer’s disease progression by multi-tissue circular RNA characterization

Autorzy: IJu Lo, Jamie Hill, Bjarni J. Vilhjálmsson, Jørgen Kjems
Opublikowane w: RNA Biology, Numer 17/12, 2020, Strona(/y) 1789-1797, ISSN 1547-6286
Wydawca: Landes Bioscience
DOI: 10.1080/15476286.2020.1783487

High-throughput RNA sequencing from paired lesional- and non-lesional skin reveals major alterations in the psoriasis circRNAome

Autorzy: Liviu-Ionut Moldovan, Thomas Birkballe Hansen, Morten Trillingsgaard Venø, Trine Line Hauge Okholm, Thomas Levin Andersen, Henrik Hager, Lars Iversen, Jørgen Kjems, Claus Johansen, Lasse Sommer Kristensen
Opublikowane w: BMC Medical Genomics, Numer 12/1, 2019, Strona(/y) 1-17, ISSN 1755-8794
Wydawca: BioMed Central
DOI: 10.1186/s12920-019-0616-2

Past, present, and future of circ RNA s

Autorzy: Ines Lucia Patop, Stas Wüst, Sebastian Kadener
Opublikowane w: The EMBO Journal, Numer 38/16, 2019, Strona(/y) 1-13, ISSN 0261-4189
Wydawca: Nature Publishing Group
DOI: 10.15252/embj.2018100836

Long non‐coding RNAs in motor neuron development and disease

Autorzy: Vamshidhar R. Vangoor, Andreia Gomes‐Duarte, R. Jeroen Pasterkamp
Opublikowane w: Journal of Neurochemistry, Numer 156/6, 2021, Strona(/y) 777-801, ISSN 0022-3042
Wydawca: Blackwell Publishing Inc.
DOI: 10.1111/jnc.15198

Circular RNAs in cell differentiation and development

Autorzy: Gaia Di Timoteo, Francesca Rossi, Irene Bozzoni
Opublikowane w: Development, Numer 147/16, 2020, ISSN 0950-1991
Wydawca: The Company of Biologists Ltd.
DOI: 10.1242/dev.182725

An in vivo strategy for knockdown of circular RNAs

Autorzy: Nagarjuna Reddy Pamudurti, Ines Lucia Patop, Aishwarya Krishnamoorthy, Reut Ashwal-Fluss, Osnat Bartok, Sebastian Kadener
Opublikowane w: Cell Discovery, Numer 6/1, 2020, Strona(/y) 11;6:52, ISSN 2056-5968
Wydawca: Springer Nature
DOI: 10.1038/s41421-020-0182-y

A comprehensive analysis of coding and non-coding transcriptomic changes in cutaneous squamous cell carcinoma

Autorzy: Kunal Das Mahapatra, Lorenzo Pasquali, Jonas Nørskov Søndergaard, Jan Lapins, István Balazs Nemeth, Eszter Baltás, Lajos Kemény, Bernhard Homey, Liviu-Ionut Moldovan, Jørgen Kjems, Claudia Kutter, Enikö Sonkoly, Lasse Sommer Kristensen, Andor Pivarcsi
Opublikowane w: Scientific Reports, Numer 10/1, 2020, Strona(/y) 1-12, ISSN 2045-2322
Wydawca: Nature Publishing Group
DOI: 10.1038/s41598-020-59660-6

Design and application of circular RNAs with protein-sponge function

Autorzy: Silke Schreiner, Anna Didio, Lee-Hsueh Hung, Albrecht Bindereif
Opublikowane w: Nucleic Acids Research, Numer 48/21, 2020, Strona(/y) 12326-12335, ISSN 0305-1048
Wydawca: Oxford University Press
DOI: 10.1093/nar/gkaa1085

Characterization of circular RNA transcriptomes in psoriasis and atopic dermatitis reveals disease‐specific expression profiles

Autorzy: Liviu I. Moldovan, Lam C. Tsoi, Uppala Ranjitha, Henrik Hager, Stephen Weidinger, Johann E. Gudjonsson, Jørgen Kjems, Lasse S. Kristensen
Opublikowane w: Experimental Dermatology, Numer 30/8, 2021, Strona(/y) 1187-1196, ISSN 0906-6705
Wydawca: Blackwell Publishing Inc.
DOI: 10.1111/exd.14227

Methods to study circRNA-protein interactions

Autorzy: Corinna J. Ulshöfer, Christina Pfafenrot, Albrecht Bindereif, Tim Schneider
Opublikowane w: Methods, Numer Volume 195, 2021, ISSN 1046-2023
Wydawca: Academic Press
DOI: 10.1016/j.ymeth.2021.04.014

Remotely Produced and Axon-Derived Netrin-1 Instructs GABAergic Neuron Migration and Dopaminergic Substantia Nigra Development

Autorzy: Sara Brignani, Divya D.A. Raj, Ewoud R.E. Schmidt, Özge Düdükcü, Youri Adolfs, Anna A. De Ruiter, Mateja Rybiczka-Tesulov, Marieke G. Verhagen, Christiaan van der Meer, Mark H. Broekhoven, Juan A. Moreno-Bravo, Laurens M. Grossouw, Emilie Dumontier, Jean-François Cloutier, Alain Chédotal, R. Jeroen Pasterkamp
Opublikowane w: Neuron, Numer 107/4, 2020, Strona(/y) 684-702.e9, ISSN 0896-6273
Wydawca: Cell Press
DOI: 10.1016/j.neuron.2020.05.037

circRNAs in Cancer

Autorzy: Ines Lucia Patop, Sebastian Kadener
Opublikowane w: Current Opinion in Genetics & Development, Numer 48, 2018, Strona(/y) 121-127, ISSN 0959-437X
Wydawca: Elsevier BV
DOI: 10.1016/j.gde.2017.11.007

Single-Cell Transcriptomics Characterizes Cell Types in the Subventricular Zone and Uncovers Molecular Defects Impairing Adult Neurogenesis

Autorzy: Vera Zywitza, Aristotelis Misios, Lena Bunatyan, Thomas E. Willnow, Nikolaus Rajewsky
Opublikowane w: Cell Reports, Numer 25/9, 2018, Strona(/y) 2457-2469.e8, ISSN 2211-1247
Wydawca: Cell Press
DOI: 10.1016/j.celrep.2018.11.003

CircVAMP3: A circRNA with a Role in Alveolar Rhabdomyosarcoma Cell Cycle Progression

Autorzy: Francesca Rossi, Alvaro Centrón-Broco, Dario Dattilo, Gaia Di Timoteo, Marco Guarnacci, Alessio Colantoni, Manuel Beltran Nebot, Irene Bozzoni
Opublikowane w: Genes, Numer 12/7, 2021, Strona(/y) 985, ISSN 2073-4425
Wydawca: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/genes12070985

Modulation of circRNA Metabolism by m6A Modification

Autorzy: Gaia Di Timoteo, Dario Dattilo, Alvaro Centrón-Broco, Alessio Colantoni, Marco Guarnacci, Francesca Rossi, Danny Incarnato, Salvatore Oliviero, Alessandro Fatica, Mariangela Morlando, Irene Bozzoni
Opublikowane w: Cell Reports, Numer 31/6, 2020, Strona(/y) 107641, ISSN 2211-1247
Wydawca: Cell Press
DOI: 10.1016/j.celrep.2020.107641

Circ-Hdgfrp3 shuttles along neurites and is trapped in aggregates formed by ALS-associated mutant FUS

Autorzy: Eleonora D’Ambra, Tiziana Santini, Erika Vitiello, Sara D’Uva, Valentina Silenzi, Mariangela Morlando, Irene Bozzoni
Opublikowane w: iScience, 2021, Strona(/y) 103504, ISSN 2589-0042
Wydawca: Cell Press
DOI: 10.1016/j.isci.2021.103504

Enrichment of Circular RNA Expression Deregulation at the Transition to Recurrent Spontaneous Seizures in Experimental Temporal Lobe Epilepsy

Autorzy: Andreia Gomes-Duarte, Sebastian Bauer, Morten T. Venø, Braxton A. Norwood, David C. Henshall, Jørgen Kjems, Felix Rosenow, Vamshidhar R. Vangoor, R. Jeroen Pasterkamp
Opublikowane w: Frontiers in Genetics, Numer 12, 2021, Strona(/y) 1-20, ISSN 1664-8021
Wydawca: Frontiers Media
DOI: 10.3389/fgene.2021.627907

Rezultaty

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