Preparation for EMPHASIS: European Infrastructure for multi-scale Plant Phenomics and Simulation for food security in a changing climate

Informacje na temat projektu

EMPHASIS-PREP

Identyfikator umowy o grant: 739514

DOI

10.3030/739514

Projekt został zamknięty

Data podpisania przez KE 13 Grudnia 2016

Data rozpoczęcia 1 Stycznia 2017

Data zakończenia 30 Czerwca 2021

Finansowanie w ramach

• EXCELLENT SCIENCE - Research Infrastructures

Koszt całkowity

€ 4 000 000,00

Wkład UE

€ 4 000 000,00

Koordynowany przez

FORSCHUNGSZENTRUM JULICH GMBH
Germany

CORDIS oferuje możliwość skorzystania z odnośników do publicznie dostępnych publikacji i rezultatów projektów realizowanych w ramach programów ramowych HORYZONT.

Odnośniki do rezultatów i publikacji związanych z poszczególnymi projektami 7PR, a także odnośniki do niektórych konkretnych kategorii wyników, takich jak zbiory danych i oprogramowanie, są dynamicznie pobierane z systemu OpenAIRE .

Rezultaty

Documents, reports (19)

Link with other information systems

Integration of EMPHASIS into general e-infrastructures (European and national level)

Data policy rules
Map of data practices

Map of current data management organisation and storage in national infrastructures

Mapping of training activities

Mapping of training activities related to different aspects of plant phenotyping

Criteria for life cycle assessment

Criteria and processes for life cycle of research infrastructure within different pillars of research infrastructure categories from EMPHASIS processes

Report on current and future user demands

Report on current and future user demands based on mapping of existing user demands of access to different infrastructure categories and access modes

Report on operations for selection of host country for EMPHASIS central hub and potential services

Selection procedure for the host country of the hub and the services

Trend document

Forsight study and trend analysis to evaluate future developments of sensors user demand user diversity etc

Report on an integrated business plan

Report on an integrated business plan for EMPHASIS including Infrastructure design user demand einfrastructure financial processes legal framework governance communication strategy

Analysis of imaging approaches

Mapping and gapping analysis of imaging approaches in different PPI

Report on user orientation towards services

Report on the orientation of users towars different service scenarios that may be provided within EMPHASIS

Governance framework including roles and responsibilities for the implementation phase

Report on operational processes of EMPHASIS for the implementation phase

Gap analysis

Gap analysis including first ideas to overcome these in i) controlled environment/ high throughput phenotyping ii) intensive, highly equipped and semi-controlled field sites, iii) lean field phenotyping sites, iv) modelling platforms.

Governance and Statutes for the EMPHASIS Operational Phase

Define Statutes ruling the governance and other procedures in EMPHASIS

Report on services tested and potential KPIs (key performance indicators)

Description of KPIs of the tested services

Criteria list for user demand

Criteria list for user demands in different infrastructure pillars and access modes

Mapping: list of existing/upcoming infrastructures

Mapping: list of existing/upcoming infrastructures in i) controlled environment/ high throughput phenotyping ii) intensive, highly equipped and semi-controlled field sites, iii) lean field phenotyping sites, iv) modelling platforms.

Criteria list for infrastructure

List of criteria defing different categories of infrastructure i) controlled environment/ high throughput phenotyping ii) intensive, highly equipped and semi-controlled field sites, iii) lean field phenotyping sites, iv) modelling platforms

Strategy: Data Management Plan

Strategy (Data Management Plan) for a European Plant Phenotyping Information System

Publikacje

Other (23)

EMPHASIS-PREP Deliverable: D3.3: Report on user orientation towards EMPHASIS services

Autorzy: Michela Janni, Silvana Moscatelli, Francesco Loreto
Opublikowane w: 2021
Wydawca: Zenodo
DOI: 10.5281/zenodo.5164072

EMPHASIS-PREP Deliverable D5.6: Governance and Statutes for the EMPHASIS Operational Phase

Autorzy: Richard Traini
Opublikowane w: 2021
Wydawca: Zenodo
DOI: 10.5281/zenodo.5164219

EMPHASIS-PREP Deliverable D5.4: Governance framework including roles and responsibilities for the implementation phase

Autorzy: Richard Traini
Opublikowane w: 2021
Wydawca: Zenodo
DOI: 10.5281/zenodo.5164206

EMPHASIS-PREP Deliverable 2.4: Gap analysis

Autorzy: Morisse, Merlijn; Wells, Darren; Alary, Pierre-Etienne; Hollebecq, Jean-Eudes; Saint Cast, Clement; Pieruschka, Roland; Dhondt, Stijn
Opublikowane w: 2019
Wydawca: Zenodo
DOI: 10.5281/zenodo.3766724

EMPHASIS-PREP Deliverable 2.2: Criteria list for user demands in different access modes

Autorzy: Janni, Michela; Moscatelli, Silvana; Ceriotti, Aldo; Loreto, Francesco
Opublikowane w: 2019
Wydawca: Zenodo
DOI: 10.5281/zenodo.3766720

EMPHASIS-PREP Deliverable 4.2: Strategy: Data Management Plan

Autorzy: Pieruschka, Roland; Fahrner, Sven; Tardieu, Francois; Usadel, Björn
Opublikowane w: 2019
Wydawca: Zenodo
DOI: 10.5281/zenodo.3766982

EMPHASIS-PREP Deliverable D3.4: Foresight study and trend analysis to evaluate future developments in plant phenotyping

Autorzy: Sven Fahrner, Roland Pieruschka
Opublikowane w: 2021
Wydawca: Zenodo
DOI: 10.5281/zenodo.5164112

EMPHASIS-PREP Deliverable 2.3: Mapping: list of existing and upcoming infrastructures

Autorzy: Morisse, Merlijn; Wells, Darren; Alary, Pierre-Etienne; Janni, Michela; Fahrner, Sven; Hollebecq, Jean-Eudes; Saint Cast, Clement; Dhondt, Stijn
Opublikowane w: 2019
Wydawca: Zenodo
DOI: 10.5281/zenodo.3766722

EMPHASIS-PREP Deliverable 2.1: Criteria list for infrastructure

Autorzy: Morisse, Merlijn; Wells, Darren; Alary, Pierre-Etienne; Pieruschka, Roland; Dhondt, Stijn
Opublikowane w: 2019
Wydawca: Zenodo
DOI: 10.5281/zenodo.3765459

EMPHASIS-PREP Deliverable 2.5: Report on current and future user demands

Autorzy: Janni, Michela; Moscatelli, Silvana; Loreto, Francesco
Opublikowane w: 2020
Wydawca: Zenodo
DOI: 10.5281/zenodo.4544533

EMPHASIS-PREP Deliverable D6.2: Report on an integrated business plan

Autorzy: Sven Fahrner, Roland Pieruschka
Opublikowane w: 2021
Wydawca: Zenodo
DOI: 10.5281/zenodo.5164222

EMPHASIS-PREP Deliverable D5.5: Report on operations for selection of host country for EMPHASIS

Autorzy: Richard Traini
Opublikowane w: 2021
Wydawca: Zenodo
DOI: 10.5281/zenodo.5164217

EMPHASIS-PREP Deliverable 3.2: Mapping of training activities

Autorzy: Moscatelli, Silvana; Janni, Michela; Loreto, Francesco
Opublikowane w: 2018
Wydawca: Zenodo
DOI: 10.5281/zenodo.3766746

From Bench to Bountiful Harvests Multinational Arabidopsis Steering Committee (MASC) Annual Report 2018/2019

Autorzy: The Multinational Arabidopsis Steering Committee
Opublikowane w: MASC Annual Report, 2019, Strona(/y) 32-33
Wydawca: MASC

EMPHASIS-PREP Deliverable 4.3: Link with other information systems

Autorzy: Tardieu, Francois; Neveu, Pascal; Pommier, Cyril; Pieruschka, Roland; Saint Cast, Clément; Draye, Xavier; Cabrera Bosquet, Llorenç; Usadel, Björn
Opublikowane w: 2019
Wydawca: Zenodo
DOI: 10.5281/zenodo.3766986

EMPHASIS-PREP Deliverable: D2.6. Criteria for life cycle assessment

Autorzy: Merlijn Morisse, Darren Wells, Pierre-Etienne Alary, Jean-Eudes Hollebecq, Clement Saint Cast, Michela Janni, Sven Fahrner, Roland Pieruschka, Stijn Dhondt
Opublikowane w: 2021
Wydawca: Zenodo
DOI: 10.5281/zenodo.5163770

Data management challenges for artificial intelligence in plant and agricultural research

Autorzy: Hugh F. Williamson, Julia Brettschneider, Mario Caccamo, Robert P. Davey, Carole Goble, Paul J. Kersey, Sean May, Richard J. Morris, Richard Ostler, Tony Pridmore, Chris Rawlings, David Studholme, Sotirios A. Tsaftaris, Sabina Leonelli
Opublikowane w: F1000Research, Numer 10, 2021, Strona(/y) 324, ISSN 2046-1402
Wydawca: F1000 Research Ltd.
DOI: 10.12688/f1000research.52204.1

EMPHASIS-PREP Deliverable D6.3: Report on services tested and potential KPIs (key performance indicators)

Autorzy: Sven Fahrner, Roland Pieruschka
Opublikowane w: 2021
Wydawca: Zenodo
DOI: 10.5281/zenodo.5164225

The complete lists of terms identified in each cluster of the plant phenotyping, image analysis tools, crop models and plant models.

Autorzy: Saint Cast, Clément
Opublikowane w: 2019
Wydawca: Zenodo
DOI: 10.5281/zenodo.5040986

EMPHASIS-PREP Deliverable 4.1: Map of data practices

Autorzy: Tardieu, Francois; Alary, Pierre-Etienne; Usadel, Björn; van Zedde, Rick; Pridmore, Tony; Neveu, Pascal
Opublikowane w: 2019
Wydawca: Zenodo
DOI: 10.5281/zenodo.3766775

Bibliographic coupling maps of the plant phenotyping, image analysis tool, plant model and crop model communities

Autorzy: Cast, Clément Saint
Opublikowane w: 2019
Wydawca: Zenodo
DOI: 10.5281/zenodo.4075293

EMPHASIS-PREP Deliverable 4.4: Analysis of imaging approaches

Autorzy: Villiers, de, H.A.C.; Zedde, van de, H.J.; Barth, R.; Pridmore, Tony
Opublikowane w: 2019
Wydawca: Zenodo
DOI: 10.5281/zenodo.3767003

EMPHASIS-PREP Deliverable D4.5: Data policy rules

Autorzy: Francois Tardieu, Pascal Neveu, Cyril Pommier, Björn Usadel
Opublikowane w: 2021
Wydawca: Zenodo
DOI: 10.5281/zenodo.5164187

Peer reviewed articles (8)

Opportunities and Limitations of Crop Phenotyping in Southern European Countries

Autorzy: Joaquim Miguel Costa, Jorge Marques da Silva, Carla Pinheiro, Matilde Barón, Photini Mylona, Mauro Centritto, Matthew Haworth, Francesco Loreto, Baris Uzilday, Ismail Turkan, Maria Margarida Oliveira
Opublikowane w: Frontiers in Plant Science, Numer 10, 2019, ISSN 1664-462X
Wydawca: Frontiers Media S. A.
DOI: 10.3389/fpls.2019.01125

Phenotyping: New Windows into the Plant for Breeders

Autorzy: Michelle Watt, Fabio Fiorani, Björn Usadel, Uwe Rascher, Onno Muller, Ulrich Schurr
Opublikowane w: Annual Review of Plant Biology, Numer 71/1, 2020, Strona(/y) 689-712, ISSN 1543-5008
Wydawca: Annual Reviews, Inc.
DOI: 10.1146/annurev-arplant-042916-041124

Current status of the multinational Arabidopsis community

Autorzy: Geraint Parry, Nicholas J. Provart, Siobhan M. Brady, Baris Uzilday, Keith Adams, Wagner Araújo, Sébastien Aubourg, Sacha Baginsky, Erica Bakker, Katja Bärenfaller, Jacqui Batley, Mike Beale, Mark Beilstein, Youssef Belkhadir, Gregor Mendel, Tanya Berardini, Joy Bergelson, Francisca Blanco‐Herrera, Siobhan Brady, Hans‐Peter Braun, Steve Briggs, Lynette Brownfield, Maura Cardarelli, Marcos C
Opublikowane w: Plant Direct, Numer 4/7, 2020, ISSN 2475-4455
Wydawca: Wiley & American Society of Plant Biologists and Society for Experimental Biology
DOI: 10.1002/pld3.248

European infrastructures for sustainable agriculture

Autorzy: Jacques Roy, François Tardieu, Michèle Tixier-Boichard, Ulrich Schurr
Opublikowane w: Nature Plants, Numer 3/10, 2017, Strona(/y) 756-758, ISSN 2055-0278
Wydawca: Macmillan Publishers Limited
DOI: 10.1038/s41477-017-0027-3

Plant Phenotyping Research Trends, a Science Mapping Approach

Autorzy: Corrado Costa, Ulrich Schurr, Francesco Loreto, Paolo Menesatti, Sebastien Carpentier
Opublikowane w: Frontiers in Plant Science, Numer 9, 2019, ISSN 1664-462X
Wydawca: Frontiers Media S. A.
DOI: 10.3389/fpls.2018.01933

The Phenotyping Dilemma—The Challenges of a Diversified Phenotyping Community

Autorzy: Eva Rosenqvist, Dominik K. Großkinsky, Carl-Otto Ottosen, Rick van de Zedde
Opublikowane w: Frontiers in Plant Science, Numer 10, 2019, ISSN 1664-462X
Wydawca: Frontiers Media S. A.
DOI: 10.3389/fpls.2019.00163

Plant Phenotyping: Past, Present, and Future

Autorzy: Roland Pieruschka, Uli Schurr
Opublikowane w: Plant Phenomics, Numer 2019, 2019, Strona(/y) 1-6, ISSN 2643-6515
Wydawca: American Association for the Advancement of Science
DOI: 10.34133/2019/7507131

Enabling reusability of plant phenomic datasets with MIAPPE 1.1

Autorzy: Evangelia A. Papoutsoglou, Daniel Faria, Daniel Arend, Elizabeth Arnaud, Ioannis N. Athanasiadis, Inês Chaves, Frederik Coppens, Guillaume Cornut, Bruno V. Costa, Hanna Ćwiek‐Kupczyńska, Bert Droesbeke, Richard Finkers, Kristina Gruden, Astrid Junker, Graham J. King, Paweł Krajewski, Matthias Lange, Marie‐Angélique Laporte, Célia Michotey, Markus Oppermann, Richard Ostler, Hendrik Poorte
Opublikowane w: New Phytologist, Numer 227/1, 2020, Strona(/y) 260-273, ISSN 0028-646X
Wydawca: Blackwell Publishing Inc.
DOI: 10.1111/nph.16544

Conference proceedings (1)

Integrating plant phenotyping community in Europe

Autorzy: Pieruschka, Roland
Opublikowane w: COST Action, Novi Sad, Serbia, 2017-09-29 - 2017-09-30, Numer 1, 2017, Strona(/y) 13, ISBN 978-86-80417-77-6
Wydawca: EPPN2020