TOWARDS NOVEL NANO-SCALE TECHNOLOGIES BASED ON PHORETIC FLOW EFFECTS

Rezultaty

Report on non-linear phoresis at nanoscale

Report that describes modelling phoretic effects focusing on the nonlinear operating regimes for the scales relevant to the project

Appointment of research and admin staff

Document describing the procedure followed to appoint research and admin staff

Review paper on modelling of phoretic effects

Article that summarizes our understanding of phoretic effects to be submitted to a scientific journal

Report on modelling phoretic effects

Report that describes modelling phoretic effects for the scales relevant to the project

Report on role of specific binding in phoresis

Document describing the undestanding achieved in the interrelation between specific binding processes in the presence of applied thermodynamic gradients

LB code for phoretic flows

Report describing the functioning of a mesoscopic code adapted to simulate phoresis under general conditions

MD code for phoresis

Report describing the functioning of a code adapted to simulate phoresis under general conditions

DDFT code for phoresis

Report describing the functioning of a mesoscopic code adapted to simulate phoresis under general conditions

Measurements of phoretic properties of Abeta peptide

Report describing the experiments performed the results obtained and the understanding gained on the phoretic behavior of Abeta peptide suspensions

Project website and logo

Document describing th eprocedure followed to set up the project website and logo and the structure and functionality of the website

Data management plan

Document describing the agreed data management plan

Publikacje

Nano-pump based on exothermic surface reactions.

Autorzy: Shaltiel Eloul; Daan Frenkel
Opublikowane w: Soft Matter, Numer 7, 2021, ISSN 1744-683X
Wydawca: Royal Society of Chemistry
DOI: 10.17863/cam.63816

Computational design of probes to detect bacterial genomes by multivalent binding

Autorzy: T. Curk, C. A. Brackley, J. D. Farrell, Z. Xing, D. Joshi, S. Direito, U. Bren, S. Angioletti-Uberti, J. Dobnikar, E. Eiser, D. Frenkel, R. J. Allen
Opublikowane w: Proc. Nat. Ac. Sci. USA, Numer 117, 2020, Strona(/y) 8719, ISSN 0027-8424
Wydawca: National Academy of Sciences
DOI: 10.1073/pnas.1918274117

Self-thermophoresis at the nanoscale using light induced solvation dynamics.

Autorzy: Carles Calero; Edwin L. Sibert; Rossend Rey
Opublikowane w: Nanoscale, Numer 2, 2020, ISSN 2040-3372
Wydawca: Royal Society of Chemistry
DOI: 10.1039/d0nr01169j

Ultrafast photomechanical transduction through thermophoretic implosion

Autorzy: Nikita Kavokine, Shuangyang Zou, Ruibin Liu, Antoine Niguès, Bingsuo Zou, Lydéric Bocquet
Opublikowane w: Nature Communications, Numer 11/1, 2020, ISSN 2041-1723
Wydawca: Nature Publishing Group
DOI: 10.1038/s41467-019-13912-w

Osmosis, from molecular insights to large-scale applications

Autorzy: Sophie Marbach, Lydéric Bocquet
Opublikowane w: Chemical Society Reviews, Numer 48/11, 2019, Strona(/y) 3102-3144, ISSN 0306-0012
Wydawca: Royal Society of Chemistry
DOI: 10.1039/c8cs00420j

Self-Propulsion of Active Colloids via Ion Release: Theory and Experiments

Autorzy: Marco De Corato, Xavier Arqué, Tania Patiño, Marino Arroyo, Samuel Sánchez, and Ignacio Pagonabarraga
Opublikowane w: Physical Review Letters, 2020, ISSN 0031-9007
Wydawca: American Physical Society
DOI: 10.1103/physrevlett.124.108001

Effect of the interaction strength and anisotropy on the diffusio-phoresis of spherical colloids

Autorzy: Jiachen Wei; Jiachen Wei; Simón Ramírez-Hinestrosa; Jure Dobnikar; Jure Dobnikar; Daan Frenkel
Opublikowane w: Soft Matter, Numer 8, 2019, ISSN 1744-683X
Wydawca: Royal Society of Chemistry
DOI: 10.1039/c9sm02053e

Diffusiophoresis driven colloidal manipulation and shortcuts to adiabaticity

Autorzy: Parvin Bayati, Emmanuel Trizac
Opublikowane w: New Journal of Physics, Numer 23/6, 2021, Strona(/y) 063028, ISSN 1367-2630
Wydawca: Institute of Physics Publishing
DOI: 10.1088/1367-2630/abf799

On the molecular correlations that result in field-dependent conductivities in electrolyte solutions

Autorzy: Dominika Lesnicki, Chloe Y. Gao, David T. Limmer, Benjamin Rotenberg
Opublikowane w: The Journal of Chemical Physics, Numer 155/1, 2021, Strona(/y) 014507, ISSN 0021-9606
Wydawca: American Institute of Physics
DOI: 10.1063/5.0052860

Self-Assembly of Microscopic Rods Due to Depletion Interaction

Autorzy: Calero, C. and Pagonabarraga, I.,
Opublikowane w: Entropy, Numer 22, 2020, Strona(/y) 1114, ISSN 1099-4300
Wydawca: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/e22101114

Static and Dynamic Self-Assembly of Pearl-Like-Chains of Magnetic Colloids Confined at Fluid Interfaces

Autorzy: Fernando Martínez‐Pedrero; Andrés González‐Banciella; Alba Camino; Ana Mateos‐Maroto; Francisco Ortega; Ramón G. Rubio; Ignacio Pagonabarraga; Carles Calero
Opublikowane w: Small, Numer 8, 2021, ISSN 1613-6829
Wydawca: Wiley Publisher
DOI: 10.1002/smll.202101188

Height distribution and orientation of colloidal dumbbells near a wall.

Autorzy: Ruben W. Verweij; Stefania Ketzetzi; Joost de Graaf; Daniela J. Kraft
Opublikowane w: PHYSICAL REVIEW E, Numer 25, 2020, ISSN 1095-3787
Wydawca: APS
DOI: 10.1103/physreve.102.062608

Regulating the aggregation of colloidal particles in an electro-osmotic micropump.

Autorzy: Zhu Zhang; Joost de Graaf; Sanli Faez
Opublikowane w: Soft Matter, Numer 18, 2020, ISSN 1744-6848
Wydawca: Royal Society of Chemistry
DOI: 10.1039/d0sm01084g

Spontaneous chiralization of polar active colloids

Autorzy: De Corato, Marco; Pagonabarraga, Ignacio; Natale, Giovanniantonio
Opublikowane w: Physical Review E, Numer 9, 2021, ISSN 2470-0045
Wydawca: American Physical Association

Collective motion of run-and-tumble repulsive and attractive particles in one-dimensional systems

Autorzy: C. Miguel Barriuso Gutiérrez, Christian Vanhille-Campos, Francisco Alarcón, Ignacio Pagonabarraga, Ricardo Brito, Chantal Valeriani
Opublikowane w: Soft Matter, 2021, ISSN 1744-683X
Wydawca: Royal Society of Chemistry
DOI: 10.1039/d1sm01006a

Reduced variance analysis of molecular dynamics simulations by linear combination of estimators

Autorzy: S. W. Coles, E. Mangaud, D. Frenkel, B. Rotenberg
Opublikowane w: The Journal of Chemical Physics, Numer 154/19, 2021, Strona(/y) 191101, ISSN 0021-9606
Wydawca: American Institute of Physics
DOI: 10.1063/5.0053737

Collective Transport of Magnetic Microparticles at a Fluid Interface through Dynamic Self-Assembled Lattices

Autorzy: Fernando Martinez-Pedrero; Francisco Ortega; Ramón G. Rubio; Carles Calero
Opublikowane w: Advanced functional materials, Numer 8, 2020, ISSN 1616-301X
Wydawca: John Wiley & Sons Ltd.
DOI: 10.1002/adfm.202002206

Effect of social distancing on super-spreadingdiseases: why pandemics modelling is morechallenging than molecular simulation

Autorzy: Xipeng Wang, Jure Dobnikar, Daan Frenkel
Opublikowane w: Molecular Physics, Numer 119, 2021, Strona(/y) e1936247, ISSN 0026-8976
Wydawca: Taylor & Francis
DOI: 10.1080/00268976.2021.1936247

Diffusion-Based Height Analysis Reveals Robust Microswimmer-Wall Separation.

Autorzy: Stefania Ketzetzi; Joost de Graaf; Daniela J. Kraft
Opublikowane w: Physical Review Letters, Numer 24, 2020, ISSN 1095-3787
Wydawca: APS
DOI: 10.1103/physrevlett.125.238001

Studying polymer diffusiophoresis with non-equilibrium molecular dynamics

Autorzy: S. Ramírez-Hinestrosa, H. Yoshida, L. Bocquet, D. Frenkel
Opublikowane w: The Journal of Chemical Physics, Numer 152/16, 2020, Strona(/y) 164901, ISSN 0021-9606
Wydawca: American Institute of Physics
DOI: 10.1063/5.0007235

Tunability of Interactions Between the Core and Shell in Rattle-Type Particles Studied with Liquid-Cell Electron Microscopy

Autorzy: Tom A. J. Welling; Kanako Watanabe; Albert Grau-Carbonell; Joost de Graaf; Daisuke Nagao; Arnout Imhof; Marijn A. van Huis; Alfons van Blaaderen
Opublikowane w: ACS Nano, Numer 4, 2021, ISSN 2574-0970
Wydawca: ASC
DOI: 10.26434/chemrxiv.14459826.v1

Structure and Chemistry of Graphene Oxide in Liquid Water from First Principles

Autorzy: Mouhat, Félix; Coudert, François-Xavier; Bocquet, Marie-Laure
Opublikowane w: Nature Communications, Numer 3, 2020, ISSN 2041-1723
Wydawca: Nature Publishing Group
DOI: 10.1038/s41467-020-15381-y

Reactive Momentum Transfer Contributes to the Self-Propulsion of Janus Particles

Autorzy: Shaltiel Eloul; Wilson C. K. Poon; Oded Farago; Oded Farago; Daan Frenkel
Opublikowane w: Physical Review Letters, Numer 7, 2020, ISSN 0031-9007
Wydawca: American Physical Society
DOI: 10.1103/physrevlett.124.188001

Ionic Coulomb blockade as a fractional Wien effect

Autorzy: Nikita Kavokine, Sophie Marbach, Alessandro Siria, Lydéric Bocquet
Opublikowane w: Nature Nanotechnology, Numer 14/6, 2019, Strona(/y) 573-578, ISSN 1748-3387
Wydawca: Nature Publishing Group
DOI: 10.1038/s41565-019-0425-y

Active control of transport through nanopores

Autorzy: Cheng Lian; Wei Zhong
Opublikowane w: AIP Physics of Fluids, Numer 14, 2021, ISSN 1070-6631
Wydawca: American Institute of Physics
DOI: 10.1063/5.0053253

Blessing and Curse: How a Supercapacitor’s Large Capacitance Causes its Slow Charging

Autorzy: Cheng Lian; Mathijs Janssen; Mathijs Janssen; Mathijs Janssen; Honglai Liu; René van Roij
Opublikowane w: Physical Review Letters, Numer 9, 2020, ISSN 1095-3787
Wydawca: APS
DOI: 10.1103/physrevlett.124.076001

Sampling mobility profiles of confined fluids with equilibrium molecular dynamics simulations

Autorzy: Etienne Mangaud, Benjamin Rotenberg
Opublikowane w: The Journal of Chemical Physics, Numer 153/4, 2020, Strona(/y) 044125, ISSN 0021-9606
Wydawca: American Institute of Physics
DOI: 10.1063/5.0013952

Active microrheology in two-dimensional magnetic networks

Autorzy: Hanqing Wang, Jure Dobnikar, Jürgen Horbach
Opublikowane w: soft matter, Numer 15, 2019, Strona(/y) 4437, ISSN 1744-683X
Wydawca: Royal Society of Chemistry
DOI: 10.1039/c9sm00085b

Dynamic response of a compressible binary fluid mixture

Autorzy: Julien Lombard; Ignacio Pagonabarraga; Ignacio Pagonabarraga; E. Corvera Poiré; E. Corvera Poiré
Opublikowane w: Physical Review Fluids, Numer 3, 2020, ISSN 2469-990X
Wydawca: American Physical Society
DOI: 10.1103/physrevfluids.5.064201

Dynamic density functional theory for the charging of electric double layer capacitors

Autorzy: Ke Ma 1 , Mathijs Janssen 2 , Cheng Lian 3 , a), and Rene van Roij 4
Opublikowane w: The journal of Chemical Physics, 2022, ISSN 1089-7690
Wydawca: AIP
DOI: 10.1063/5.0081827

Versatile electrification of two-dimensional nanomaterials in water.

Autorzy: Grosjean, Benoît; Bocquet, Marie-Laure; Vuilleumier, Rodolphe
Opublikowane w: Nature Communications, Numer 1, 2019, ISSN 2041-1723
Wydawca: Nature Publishing Group
DOI: 10.1038/s41467-019-09708-7

Multiscale modeling of electrolytes in porous electrode: From equilibriumstructure to non-equilibrium transport

Autorzy: Haolan Tao Cheng Lian Honglai Liu
Opublikowane w: ScienceDirect -Green Energy & Environment, 2020, ISSN 2468-0257
Wydawca: Chinese Academy of Sciences Elsevier B.V.
DOI: 10.1016/j.gee.2020.06.020

Scalable integration of nano-, and microfluidics with hybrid two-photon lithography

Autorzy: Vanderpoorten, Oliver; Peter, Quentin; Challa, Pavan; Keyser, Ulrich; Baumberg, Jeremy; Kaminski, Clemens; Knowles, Tuomas
Opublikowane w: Microsystems & Nanoengineering, Numer 11, 2019, ISSN 2055-7434
Wydawca: Nature Publishing Group
DOI: 10.1038/s41378-019-0080-3

Particle-Stabilized Janus Emulsions that Exhibit pH-Tunable Stability

Autorzy: T. Li, A. Schofield, K. Chen, J. Thijssen, J. Dobnikar, P. Clegg
Opublikowane w: chemical communications, Numer 55, 2019, Strona(/y) 5773, ISSN 1359-7345
Wydawca: Royal Society of Chemistry
DOI: 10.1039/c8cc09842e

Amphibious Transport of Fluids and Solids by Soft Magnetic Carpets

Autorzy: Ahmet F. Demirörs; Sümeyye Aykut; Sophia Ganzeboom; Yuki A. Meier; Robert Hardeman; Joost Graaf; Arnold J. T. M. Mathijssen; Erik Poloni; Julia A. Carpenter; Caner Ünlü; Daniel Zenhäusern
Opublikowane w: Advanced Science, Vol 8, Iss 21, Pp n/a-n/a (2021), Numer 28, 2021, ISSN 2198-3844
Wydawca: wiley
DOI: 10.1002/advs.202102510

Reentrant liquid condensate phase of proteins is stabilized by hydrophobic and non-ionic interactions

Autorzy: Georg Krainer; Timothy J. Welsh; Jerelle A. Joseph; Jorge R. Espinosa; Sina Wittmann; Ella de Csilléry; Akshay Sridhar; Zenon Toprakcioglu; Giedre Gudiškytė; Magdalena A. Czekalska; William E. Arter; Peter St George-Hyslop; Anthony A. Hyman; Rosana Collepardo-Guevara; Simon Alberti; Tuomas P.J. Knowles
Opublikowane w: Nature communications, Numer 12, 2021, ISSN 2041-1723
Wydawca: Nature Publishing Group
DOI: 10.1101/2020.05.04.076299

Use the force! Reduced variance estimators for densities, radial distribution functions, and local mobilities in molecular simulations

Autorzy: Benjamin Rotenberg
Opublikowane w: The Journal of Chemical Physics, Numer 153/15, 2020, Strona(/y) 150902, ISSN 0021-9606
Wydawca: American Institute of Physics
DOI: 10.1063/5.0029113

Water under extreme confinement in graphene: Oscillatory dynamics, structure, and hydration pressure explained as a function of the confinement width

Autorzy: Carles Calero; Giancarlo Franzese
Opublikowane w: Journal of Molecular Liquids, Numer 3, 2020, ISSN 0167-7322
Wydawca: Elsevier BV
DOI: 10.1016/j.molliq.2020.114027

Enhancing electrocatalytic N2 reduction via tailoring the electric double layers

Autorzy: Haolan Tao,Cheng Lian,Hao Jiang,Chunzhong Li,Honglai Liu,René van Roij
Opublikowane w: AICHE JOurnal, Numer Volume 68, Numer 3, 2021, ISSN 1547-5905
Wydawca: Wiley
DOI: 10.1002/aic.17549

Controlling Cargo Trafficking in Multicomponent Membranes

Autorzy: T. Curk, P. Wirnsberger, J. Dobnikar, D. Frenkel
Opublikowane w: Nano Letters, Numer 18, 2018, Strona(/y) 5350, ISSN 1530-6984
Wydawca: American Chemical Society
DOI: 10.1021/acs.nanolett.8b00786

Mechanically activated ionic transport across single-digit carbon nanotubes

Autorzy: Alice Marcotte, Timothée Mouterde, Antoine Niguès, Alessandro Siria, Lydéric Bocquet
Opublikowane w: Nature Materials, Numer 19/10, 2020, Strona(/y) 1057-1061, ISSN 1476-1122
Wydawca: Nature Publishing Group
DOI: 10.1038/s41563-020-0726-4

Dynamics and clogging of colloidal monolayers magnetically driven through a heterogeneous landscape.

Autorzy: Sergio Granados Leyva; Ralph L. Stoop; Pietro Tierno; Ignacio Pagonabarraga; Ignacio Pagonabarraga
Opublikowane w: Soft Matter, Numer 11, 2020, ISSN 1744-683X
Wydawca: Royal Society of Chemistry
DOI: 10.1039/d0sm00904k

Aggregation of discoidal particles due to depletion interaction

Autorzy: Calero, C., Díaz-Morata, M. and Pagonabarraga, I.,
Opublikowane w: The Journal of Chemical Physics, Numer 155, 2021, Strona(/y) 074904, ISSN 0021-9606
Wydawca: American Institute of Physics
DOI: 10.1063/5.0052481

Morphology Evolution of a Particle-Stabilized Binary-Component System

Autorzy: Tao Li, J. Klebes, Jure Dobnikar, Paul S. Clegg
Opublikowane w: Chem. Commun, Numer 55, 2019, Strona(/y) 5575, ISSN 1359-7345
Wydawca: Royal Society of Chemistry
DOI: 10.1039/c9cc01519a

Microscopic insights into the ion transport in graphene-based membranes with different interlayer spacing distributions

Autorzy: Haolan Taoa Sen Lin Cheng Lian Chunzhong Liad Honglai Liu
Opublikowane w: Science Direct Chemical Engineering Science, 2020, ISSN 0009-2509
Wydawca: Pergamon Press Ltd.
DOI: 10.1016/j.ces.2019.115354

The Lennard-Jones potential: when (not) to use it

Autorzy: Xipeng Wang, Simòn Ramirez-Hinestrosa, Jure Dobnikar, Daan Frenkel
Opublikowane w: Physical Chemistry Chemical Physics, Numer 22, 2020, Strona(/y) 10624, ISSN 1463-9076
Wydawca: Royal Society of Chemistry
DOI: 10.1039/c9cp05445f

Local and global force balance for diffusiophoretic transport

Autorzy: S. Marbach, H. Yoshida, L. Bocquet
Opublikowane w: Journal of Fluid Mechanics, Numer 892, 2020, ISSN 0022-1120
Wydawca: Cambridge University Press
DOI: 10.1017/jfm.2020.137

Attoliter protein nanogels from droplet nanofluidics for intracellular delivery.

Autorzy: Toprakcioglu, Zenon; Challa, Pavan Kumar; Morse, David B; Knowles, Tuomas
Opublikowane w: Science Advances, Numer 11, 2020, ISSN 2375-2548
Wydawca: Association Advancement Science
DOI: 10.17863/cam.45850

Spontaneous polarization and locomotion of an active particlewith surface-mobile enzymes

Autorzy: Marco De Corato, Ignacio Pagonabarraga, Loai K. E. A. Abdelmohsen, Samuel Sánchez, and Marino Arroyo
Opublikowane w: PHYSICAL REVIEW FLUIDS, 2020, ISSN 2469-990X
Wydawca: American Physical Society
DOI: 10.1103/physrevfluids.5.122001

Spontaneous Domain Formation in Spherically Confined Elastic Filaments.

Autorzy: Curk, Tine; Farrell, James Daniel; Dobnikar, Jure; Podgornik, Rudolf
Opublikowane w: Physical Review Letters, Numer 8, 2019, ISSN 0031-9007
Wydawca: American Physical Society
DOI: 10.1103/physrevlett.123.047801

Small Obstacle in a Large Polar Flock

Autorzy: Joan Codina,Benoit Mahault, Hugues Chaté, Jure Dobnikar, gnacio Pagonabarraga, and Xia-qing Shi
Opublikowane w: arxiv repository, 2021
Wydawca: Cornell University

Single particle zeta-potential measurements reveal the role of electrostatics in protein condensate stability

Autorzy: Welsh, Timothy J.; Krainer, Georg; Espinosa, Jorge R.; Joseph, Jerelle A.; Sridhar, Akshay; Jahnel, Marcus; Arter, William E.; Saar, Kadi L.; Alberti, Simon; Collepardo-Guevara, Rosana; Knowles, Tuomas P.J.
Opublikowane w: biorxiv, Numer 8, 2021
Wydawca: Cold Spring Harbor Laboratory
DOI: 10.1101/2020.04.20.047910

Activity-induced microswimmer interactions and cooperation in one-dimensional environments

Autorzy: Ketzetzi, Stefania; Rinaldin, Melissa; Dröge, Pim; de Graaf, Joost; Kraft, Daniela J.
Opublikowane w: arxiv repository, Numer 8, 2021
Wydawca: Cornell University

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Numer wniosku/publikacji: 20 20050833
Data: 2020-03-27
Wnioskodawca/wnioskodawcy: FLUIDIC ANALYTICS LIMITED

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