Model-guided Engineering of Complex Microbial Communities

Project Information

ModEM

Grant agreement ID: 866028

DOI

10.3030/866028

EC signature date 22 September 2020

Start date 1 October 2020

End date 30 September 2026

Funded under

• EXCELLENT SCIENCE - European Research Council (ERC)

Total cost

€ 1 995 818,00

EU contribution

€ 1 995 818,00

Coordinated by

THE CHANCELLOR MASTERS AND SCHOLARS OF THE UNIVERSITY OF CAMBRIDGE
United Kingdom

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Publications

Peer reviewed articles (5)

metaGEM: reconstruction of genome scale metabolic models directly from metagenomes

Author(s): Francisco Zorrilla, Filip Buric, Kiran R Patil, Aleksej Zelezniak
Published in: Nucleic Acids Research, 2021, ISSN 0305-1048
Publisher: Oxford University Press
DOI: 10.1093/nar/gkab815

Unravelling metabolic cross‐feeding in a yeast–bacteria community using <scp> ¹³ C </scp> ‐based proteomics

Author(s): Natalia Gabrielli; Christoniki Maga‐Nteve; Eleni Kafkia; Mandy Rettel; Jakob Loeffler; Stephan Kamrad; Athanasios Typas; Kiran Raosaheb Patil
Published in: Molecular Systems Biology, Issue 1, 2023, ISSN 1744-4292
Publisher: Nature Publishing Group
DOI: 10.15252/msb.202211501

Adaptive laboratory evolution of microbial co‐cultures for improved metabolite secretion

Author(s): Dimitrios Konstantinidis; Filipa Pereira; Eva‐Maria Geissen; Kristina Grkovska; Eleni Kafkia; Paula Jouhten; Yongkyu Kim; Saravanan Devendran; Michael Zimmermann; Kiran Raosaheb Patil
Published in: Molecular Systems Biology, Issue 17:e10189, 2021, ISSN 1744-4292
Publisher: Nature Publishing Group
DOI: 10.15252/msb.202010189

Predictive evolution of metabolic phenotypes using model-designed environments

Author(s): Jouhten, Paula; Konstantinidis, Dimitrios; Pereira, Filipa; Andrejev, Sergej; Grkovska, Kristina; Castillo, Sandra; Ghiachi, Payam; Beltran, Gemma; Almaas, Eivind; Mas, Albert; Warringer, Jonas; Gonzalez, Ramon; Morales, Pilar; Patil, Kiran R.; 0000-0003-1075-7448; 0000-0002-9125-326X; 0000-0002-0763-1679; 0000-0001-6144-2740; 0000-0002-0130-6111; 0000-0002-6166-8640
Published in: Molecular Systems Biology, Issue 2, 2022, ISSN 1744-4292
Publisher: Nature Publishing Group
DOI: 10.15252/msb.202210980

Ecological modelling approaches for predicting emergent properties in microbial communities

Author(s): Naomi Iris van den Berg, Daniel Machado, Sophia Santos, Isabel Rocha, Jeremy Chacón, William Harcombe, Sara Mitri & Kiran R. Patil
Published in: Nature Ecology and Evolution, 2022, ISSN 2397-334X
Publisher: Springer Nature
DOI: 10.1038/s41559-022-01746-7