Computational Biophotonics for Endoscopic Cancer Diagnosis and Therapy

Analyzing Inverse Problems with Invertible Neural Networks

Autorzy: Lynton Ardizzone, Jakob Kruse, Sebastian Wirkert, Daniel Rahner, Eric W. Pellegrini, Ralf S. Klessen, Lena Maier-Hein, Carsten Rother, Ullrich Köthe
Opublikowane w: International Conference on Learning Representations, 2019
Wydawca: ICLR

Uncertainty handling in intra-operative multispectral imaging with invertible neural networks

Autorzy: Tim J. Adler, Lynton Ardizzone, Leonardo Ayala, Janek Gröhl, Anant Vemuri, Sebastian J. Wirkert, Beat P. Müller-Stich, Carsten Rother, Ullrich Köthe, Lena Maier-Hein
Opublikowane w: International Conference on Medical Imaging with Deep Learning, 2019
Wydawca: OpenReview.net

Freehand photoacoustic tomography for 3D angiography using local gradient information

Autorzy: Thomas Kirchner, Esther Wild, Klaus H. Maier-Hein, Lena Maier-Hein
Opublikowane w: Photons Plus Ultrasound: Imaging and Sensing 2016, 2016, Strona(/y) 97083G
Wydawca: SPIE
DOI: 10.1117/12.2209368

Tissue classification for laparoscopic image understanding based on multispectral texture analysis

Autorzy: Yan Zhang, Sebastian J. Wirkert, Justin Iszatt, Hannes Kenngott, Martin Wagner, Benjamin Mayer, Christian Stock, Neil T. Clancy, Daniel S. Elson, Lena Maier-Hein
Opublikowane w: Medical Imaging 2016: Image-Guided Procedures, Robotic Interventions, and Modeling, 2016, Strona(/y) 978619
Wydawca: SPIE
DOI: 10.1117/12.2216090

Photoacoustic monitoring of blood oxygenation during neurosurgical interventions

Autorzy: Thomas Kirchner, Janek Gröhl, Niklas Holzwarth, Mildred A. Herrera, Adrián Hernández-Aguilera, Edgar Santos, Lena Maier-Hein
Opublikowane w: Photons Plus Ultrasound: Imaging and Sensing 2019, 2019, Strona(/y) 11, ISBN 9781510623996
Wydawca: SPIE
DOI: 10.1117/12.2509608

Confidence estimation for quantitative photoacoustic imaging

Autorzy: Janek Gröhl, Thomas Kirchner, Lena Maier-Hein
Opublikowane w: Photons Plus Ultrasound: Imaging and Sensing 2018, 2018, Strona(/y) 46, ISBN 9781510614741
Wydawca: SPIE
DOI: 10.1117/12.2288362

Reconstruction of initial pressure from limited view photoacoustic images using deep learning

Autorzy: Janek Gröhl, Dominik Waibel, Fabian Isensee, Thomas Kirchner, Klaus Maier-Hein, Lena Maier-Hein
Opublikowane w: Photons Plus Ultrasound: Imaging and Sensing 2018, 2018, Strona(/y) 98, ISBN 9781510614741
Wydawca: SPIE
DOI: 10.1117/12.2288353

Real-time blood oxygenation tomography with multispectral photoacoustics

Autorzy: Thomas Kirchner
Opublikowane w: 2019
Wydawca: University Heidelberg
DOI: 10.11588/heidok.00026696

Multispectral image analysis in laparoscopy – A machine learning approach to live perfusion monitoring

Autorzy: Sebastian J Wirkert
Opublikowane w: 2018
Wydawca: KIT Karlsruhe
DOI: 10.5445/ir/1000086188

Anser EMT: the first open-source electromagnetic tracking platform for image-guided interventions

Autorzy: Herman Alexander Jaeger, Alfred Michael Franz, Kilian O’Donoghue, Alexander Seitel, Fabian Trauzettel, Lena Maier-Hein, Pádraig Cantillon-Murphy
Opublikowane w: International Journal of Computer Assisted Radiology and Surgery, Numer 12/6, 2017, Strona(/y) 1059-1067, ISSN 1861-6410
Wydawca: Springer Verlag
DOI: 10.1007/s11548-017-1568-7

Light source calibration for multispectral imaging in surgery

Autorzy: Leonardo Ayala, Silvia Seidlitz, Anant Vemuri, Sebastian J. Wirkert, Thomas Kirchner, Tim J. Adler, Christina Engels, Dogu Teber, Lena Maier-Hein
Opublikowane w: International Journal of Computer Assisted Radiology and Surgery, Numer 15/7, 2020, Strona(/y) 1117-1125, ISSN 1861-6410
Wydawca: Springer Verlag
DOI: 10.1007/s11548-020-02195-y

Learned spectral decoloring enables photoacoustic oximetry

Autorzy: Janek Gröhl, Thomas Kirchner, Tim J. Adler, Lina Hacker, Niklas Holzwarth, Adrián Hernández-Aguilera, Mildred A. Herrera, Edgar Santos, Sarah E. Bohndiek, Lena Maier-Hein
Opublikowane w: Scientific Reports, Numer 11/1, 2021, ISSN 2045-2322
Wydawca: Nature Publishing Group
DOI: 10.1038/s41598-021-83405-8

MITK-OpenIGTLink for combining open-source toolkits in real-time computer-assisted interventions

Autorzy: Martin Klemm, Thomas Kirchner, Janek Gröhl, Dominique Cheray, Marco Nolden, Alexander Seitel, Harald Hoppe, Lena Maier-Hein, Alfred M. Franz
Opublikowane w: International Journal of Computer Assisted Radiology and Surgery, Numer 12/3, 2017, Strona(/y) 351-361, ISSN 1861-6410
Wydawca: Springer Verlag
DOI: 10.1007/s11548-016-1488-y

Deep learning for biomedical photoacoustic imaging: A review

Autorzy: Janek Gröhl, Melanie Schellenberg, Kris Dreher, Lena Maier-Hein
Opublikowane w: Photoacoustics, Numer 22, 2021, Strona(/y) 100241, ISSN 2213-5979
Wydawca: Elsevier GmbH
DOI: 10.1016/j.pacs.2021.100241

Why rankings of biomedical image analysis competitions should be interpreted with care

Autorzy: Lena Maier-Hein, Matthias Eisenmann, Annika Reinke, Sinan Onogur, Marko Stankovic, Patrick Scholz, Tal Arbel, Hrvoje Bogunovic, Andrew P. Bradley, Aaron Carass, Carolin Feldmann, Alejandro F. Frangi, Peter M. Full, Bram van Ginneken, Allan Hanbury, Katrin Honauer, Michal Kozubek, Bennett A. Landman, Keno März, Oskar Maier, Klaus Maier-Hein, Bjoern H. Menze, Henning Müller, Peter F. Neher, Wiro N
Opublikowane w: Nature Communications, Numer 9/1, 2018, ISSN 2041-1723
Wydawca: Nature Publishing Group
DOI: 10.1038/s41467-018-07619-7

Context encoding enables machine learning-based quantitative photoacoustics

Autorzy: Thomas Kirchner, Janek Gröhl, Lena Maier-Hein
Opublikowane w: Journal of Biomedical Optics, Numer 23/05, 2018, Strona(/y) 1, ISSN 1083-3668
Wydawca: S P I E - International Society for Optical Engineering
DOI: 10.1117/1.jbo.23.5.056008

Tissue classification for laparoscopic image understanding based on multispectral texture analysis

Autorzy: Yan Zhang, Sebastian J. Wirkert, Justin Iszatt, Hannes Kenngott, Martin Wagner, Benjamin Mayer, Christian Stock, Neil T. Clancy, Daniel S. Elson, Lena Maier-Hein
Opublikowane w: Journal of Medical Imaging, Numer 4/1, 2017, Strona(/y) 015001, ISSN 2329-4302
Wydawca: SPIE
DOI: 10.1117/1.jmi.4.1.015001

Robust near real-time estimation of physiological parameters from megapixel multispectral images with inverse Monte Carlo and random forest regression

Autorzy: Sebastian J. Wirkert, Hannes Kenngott, Benjamin Mayer, Patrick Mietkowski, Martin Wagner, Peter Sauer, Neil T. Clancy, Daniel S. Elson, Lena Maier-Hein
Opublikowane w: International Journal of Computer Assisted Radiology and Surgery, Numer 11/6, 2016, Strona(/y) 909-917, ISSN 1861-6410
Wydawca: Springer Verlag
DOI: 10.1007/s11548-016-1376-5

Confidence Estimation for Machine Learning-Based Quantitative Photoacoustics

Autorzy: Janek Gröhl, Thomas Kirchner, Tim Adler, Lena Maier-Hein
Opublikowane w: Journal of Imaging, Numer 4/12, 2018, Strona(/y) 147, ISSN 2313-433X
Wydawca: MDPI
DOI: 10.3390/jimaging4120147

Uncertainty-aware performance assessment of optical imaging modalities with invertible neural networks

Autorzy: Tim J. Adler, Lynton Ardizzone, Anant Vemuri, Leonardo Ayala, Janek Gröhl, Thomas Kirchner, Sebastian Wirkert, Jakob Kruse, Carsten Rother, Ullrich Köthe, Lena Maier-Hein
Opublikowane w: International Journal of Computer Assisted Radiology and Surgery, Numer 14/6, 2019, Strona(/y) 997-1007, ISSN 1861-6410
Wydawca: Springer Verlag
DOI: 10.1007/s11548-019-01939-9

Surgical data science for next-generation interventions

Autorzy: Lena Maier-Hein, Swaroop S. Vedula, Stefanie Speidel, Nassir Navab, Ron Kikinis, Adrian Park, Matthias Eisenmann, Hubertus Feussner, Germain Forestier, Stamatia Giannarou, Makoto Hashizume, Darko Katic, Hannes Kenngott, Michael Kranzfelder, Anand Malpani, Keno März, Thomas Neumuth, Nicolas Padoy, Carla Pugh, Nicolai Schoch, Danail Stoyanov, Russell Taylor, Martin Wagner, Gregory D. Hager, Pierre
Opublikowane w: Nature Biomedical Engineering, Numer 1/9, 2017, Strona(/y) 691-696, ISSN 2157-846X
Wydawca: Springer
DOI: 10.1038/s41551-017-0132-7

Uncertainty-Aware Organ Classification for Surgical Data Science Applications in Laparoscopy

Autorzy: Moccia Sara, Wirkert Sebastian J., Kenngott Hannes, Vemuri Anant S., Apitz Martin, Mayer Benjamin, De Momi Elena, Mattos Leonardo S., Maier-Hein, Lena
Opublikowane w: IEEE Transactions on Biomedical Engineering, 2018, ISSN 0018-9294
Wydawca: Institute of Electrical and Electronics Engineers
DOI: 10.1109/tbme.2018.2813015

Photoacoustics can image spreading depolarization deep in gyrencephalic brain

Autorzy: Thomas Kirchner, Janek Gröhl, Mildred A. Herrera, Tim Adler, Adrián Hernández-Aguilera, Edgar Santos, Lena Maier-Hein
Opublikowane w: Scientific Reports, Numer 9/1, 2019, ISSN 2045-2322
Wydawca: Nature Publishing Group
DOI: 10.1038/s41598-019-44935-4

Signed Real-Time Delay Multiply and Sum Beamforming for Multispectral Photoacoustic Imaging

Autorzy: Thomas Kirchner, Franz Sattler, Janek Gröhl, Lena Maier-Hein
Opublikowane w: Journal of Imaging, Numer 4/10, 2018, Strona(/y) 121, ISSN 2313-433X
Wydawca: MDPI
DOI: 10.3390/jimaging4100121

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