The main findings of the PNANOMED project relate to the biology of acute myeloid leukemia (AML) and chronic myelomonocytic leukemia (CMML), the function and targeting of mutant IDH1, and lipid nanoparticle/siRNA formulations as novel therapeutic agents.
We established multiple serially transplantable patient derived xenograft (PDX) models from leukemia patients including three serially transplantable CMML-PDX models with disease related gene mutations that recapitulate the disease in vivo. We identified the combination of azacitidine and trametinib as an effective treatment in NRAS-mutated CMML and proposed its clinical development.
We identified novel biologic functions in leukemia and normal cells relating to the function of ETV6, IDH1, its oncometabolite R-2HG and the fusion gene KMT2A-MLLT3.
We identified, patented and characterized the novel mutant IDH1 inhibitor HMS-101 and showed that IDH1 inhibitors strongly synergize with the hypomethylating chemotherapy azacitidine.
We developed siRNAs that specifically inhibit the fusion oncogenes BCR-ABL, TCF3-PBX1, NUP98-NSD1 and CALM-AF10. We packaged the siRNAs in lipid nanoparticles and treated xenograft AML mice. The target siRNA/LNP formulation improved the survival of the mice and was overall well tolerated. This work provides a new, selective approach for targeting fusion oncogenes, which were previously considered undruggable.