An integrated approach to understanding the impact of de novo mutations on the mammalian genome

Pubblicazioni

De Novo Mutation Rate Variation and Its Determinants in Chlamydomonas

Autori: Eugenio López-Cortegano; Rory J. Craig; Jobran Chebib; Toby Samuels; Andrew D. Morgan; Susanne A. Kraemer; Katharina B. Böndel; Rob W. Ness; Nick Colegrave; Peter D. Keightley
Pubblicato in: López-Cortegano , E , Craig , R J , Chebib , J , Samuels , T , Morgan , A D , Kraemer , S A , Böndel , K B , Ness , R W , Colegrave , N , Keightley , P D & Hendrickson , H (ed.) 2021 , ' De novo mutation rate variation and its determinants in Chlamydomonas ' , Molecular Biology and Evolution , vol. 38 , no. 9 , msab140 , pp. 3709–3723 . https://doi.org/10.1093/molbev/msab140, Numero 1, 2021, ISSN 1537-1719
Editore: OUP SMBE
DOI: 10.1093/molbev/msab140

Fitness decline under osmotic stress in Caenorhabditis elegans populations subjected to spontaneous mutation accumulation at varying population sizes.

Autori: Katju, V., Packard, L. B. and Keightley, P. D.
Pubblicato in: Evolution, 2018, ISSN 1558-5646
Editore: Wiley

Inferring the distribution of fitness effects of spontaneous mutations in Chlamydomonas reinhardtii

Autori: Katharina B. Böndel, Susanne A. Kraemer, Toby Samuels, Deirdre McClean, Josianne Lachapelle, Rob W. Ness, Nick Colegrave, Peter D. Keightley
Pubblicato in: PLOS Biology, Numero 17/6, 2019, Pagina/e e3000192, ISSN 1545-7885
Editore: PLoS
DOI: 10.1371/journal.pbio.3000192

Comparative genomics of Chlamydomonas.

Autori: Craig, R. J., Hasan, A. R., Ness, R. W. and Keightley, P. D.
Pubblicato in: Plant Cell, 2021, ISSN 1040-4651
Editore: American Society of Plant Biologists

The distribution of fitness effects of spontaneous mutations in Chlamydomonas reinhardtii inferred using frequency changes under experimental evolution

Autori: Katharina B. Böndel; Toby Samuels; Rory J. Craig; Rob W. Ness; Nick Colegrave; Peter D. Keightley
Pubblicato in: PLoS Genetics, Numero 3, 2022, ISSN 1553-7404
Editore: Public Library of Science
DOI: 10.1371/journal.pgen.1009840

Rates and spectra of de novo structural mutations in<i>Chlamydomonas reinhardtii</i>

Autori: Eugenio López-Cortegano; Rory J. Craig; Jobran Chebib; Eniolaye J. Balogun; Peter D. Keightley
Pubblicato in: Genome Research, Numero 2, 2021, ISSN 1549-5469
Editore: Cold Spring Harbor Laboratory Press
DOI: 10.1101/gr.276957.122

Inbred lab mice are not isogenic: genetic variation within inbred strains used to infer the mutation rate per nucleotide site.

Autori: Chebib, J., Jackson, B. C., López-Cortegano, E., Tautz, D. and Keightley, P. D.
Pubblicato in: Heredity, 2020, ISSN 1365-2540
Editore: Nature

Understanding the factors that shape patterns of nucleotide diversity in the house mouse genome

Autori: Tom R. Booker; Peter D. Keightley
Pubblicato in: Booker , T R & Keightley , P D 2018 , ' Understanding the factors that shape patterns of nucleotide diversity in the house mouse genome ' , Molecular Biology and Evolution . https://doi.org/10.1093/molbev/msy188, Numero 1, 2018, ISSN 1537-1719
Editore: OuP
DOI: 10.1101/275610

Patterns of population structure and complex haplotype sharing among field isolates of the green alga Chlamydomonas reinhardtii

Autori: Rory J. Craig, Katharina B. Böndel, Kazuharu Arakawa, Takashi Nakada, Takuro Ito, Graham Bell, Nick Colegrave, Peter D. Keightley, Rob W. Ness
Pubblicato in: Molecular Ecology, Numero 28/17, 2019, Pagina/e 3977-3993, ISSN 0962-1083
Editore: Blackwell Publishing Inc.
DOI: 10.1111/mec.15193

Inferring the Probability of the Derived versus the Ancestral Allelic State at a Polymorphic Site

Autori: Peter D. Keightley, Benjamin C. Jackson
Pubblicato in: Genetics, 2018, Pagina/e genetics.301120.2018, ISSN 0016-6731
Editore: Genetics Society of America
DOI: 10.1534/genetics.118.301120

The Recombination Landscape in Wild House Mice Inferred Using Population Genomic Data

Autori: Tom R. Booker, Rob W. Ness, Peter D. Keightley
Pubblicato in: Genetics, Numero 207/1, 2017, Pagina/e 297-309, ISSN 0016-6731
Editore: Genetics Society of America
DOI: 10.1534/genetics.117.300063

Detecting positive selection in the genome

Autori: Tom R. Booker, Benjamin C. Jackson, Peter D. Keightley
Pubblicato in: BMC Biology, Numero 15/1, 2017, ISSN 1741-7007
Editore: BioMed Central
DOI: 10.1186/s12915-017-0434-y

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