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VIral and BacteRial Adhesin Network Training

Rezultaty

>10 review articles published/in press
Developed materials and methods for capture/enrichment of multiple pathogens based on adhesin-ligand binding

Developed materials and methods for captureenrichment of multiple pathogens based on adhesinligand binding

Initial website

Initial public website goes live

30 publications in high-quality open-access journals

30 publications in highquality openaccess journals

Publikacje

Novel Biorecognition Elements against Pathogens in the Design of State-of-the Art Diagnostics

Autorzy: Sande M.G, Rodrigues J.L, Ferreira D, Silva C.J, Rodrigues L. R.
Opublikowane w: Biosensors, 2021, ISSN 2079-6374
Wydawca: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/bios11110418

Complete Genome Sequence of Bartonella alsatica Strain IBS 382 (CIP 105477)

Autorzy: Arno Thibau, Tilman G. Schultze, Wibke Ballhorn, Volkhard A. J. Kempf
Opublikowane w: Microbiology Resource Announcements, Numer Volume 9 Numer 34, 2020, ISSN 2576-098X
Wydawca: American Society for Microbiology
DOI: 10.1128/mra.00769-20

Host-Pathogen Adhesion as the Basis of Innovative Diagnostics for Emerging Pathogens

Autorzy: Alex van Belkum, Carina Almeida, Benjamin Bardiaux, Sarah V. Barrass, Sarah J. Butcher, Tuğçe Çaykara, Sounak Chowdhury, Rucha Datar, Ian Eastwood, Adrian Goldman, Manisha Goyal, Lotta Happonen, Nadia Izadi-Pruneyre, Theis Jacobsen, Pirjo H. Johnson, Volkhard A. J. Kempf, Andreas Kiessling, Juan Leva Bueno, Anchal Malik, Johan Malmström, Ina Meuskens, Paul A. Milner, Michael Nilges, Nicole Pam
Opublikowane w: Diagnostics, Numer 11/7, 2021, Strona(/y) 1259, ISSN 2075-4418
Wydawca: MDPI
DOI: 10.3390/diagnostics11071259

Secondary structure and 1H, 15N & 13C resonance assignments of the periplasmic domain of OutG, Major pseudodopilin from Dickeya dadantii type II secretion system

Autorzy: Jacobsen T, Dazzoni R, Renault M.G, Bardiaux B, Nilges M, Shevchik V, Izadi-Pruneyre N.
Opublikowane w: Biomol NMR Assign, 2022, ISSN 1874-2718
Wydawca: Springer Verlag
DOI: 10.1007/s12104-022-10085-4

Type V Secretion Systems: An Overview of Passenger Domain Functions

Autorzy: Ina Meuskens, Athanasios Saragliadis, Jack C. Leo, Dirk Linke
Opublikowane w: Frontiers in Microbiology, Numer 10, 2019, ISSN 1664-302X
Wydawca: Frontiers Media
DOI: 10.3389/fmicb.2019.01163

Inertial focusing of microparticles, bacteria, and blood in serpentine glass channels

Autorzy: Pablo Rodriguez-Mateos, Bongkot Ngamsom, Charlotte E. Dyer, Alexander Iles, Nicole Pamme
Opublikowane w: Electrophoresis, Numer 42, 2021, Strona(/y) 2246-2255, ISSN 0173-0835
Wydawca: John Wiley & Sons Ltd.
DOI: 10.1002/elps.202100083

Dynamic relocalization of cytosolic type III secretion system components prevents premature protein secretion at low external pH

Autorzy: Stephan Wimmi, Alexander Balinovic, Hannah Jeckel, Lisa Selinger, Dimitrios Lampaki, Emma Eisemann, Ina Meuskens, Dirk Linke, Knut Drescher, Ulrike Endesfelder, Andreas Diepold
Opublikowane w: Nature Communications, Numer 12/1, 2021, ISSN 2041-1723
Wydawca: Nature Publishing Group
DOI: 10.1038/s41467-021-21863-4

Molecular Organisation of Tick-Borne Encephalitis Virus

Autorzy: Pulkkinen L.I.A, Barrass S. V, Domanska A, Överby A.K, Anastasina M, Butcher S. J.
Opublikowane w: Viruses, 2022, ISSN 1999-4915
Wydawca: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/v14040792

Long-Read Sequencing Reveals Genetic Adaptation of Bartonella Adhesin A Among Different Bartonella henselae Isolates

Autorzy: Arno Thibau, Katharina Hipp, Diana J. Vaca, Sounak Chowdhury, Johan Malmström, Athanasios Saragliadis, Wibke Ballhorn, Dirk Linke, Volkhard A. J. Kempf
Opublikowane w: Frontiers in Microbiology, Numer Volume 13, Article 838267, 2022, ISSN 1664-302X
Wydawca: Frontiers Media
DOI: 10.3389/fmicb.2022.838267

The C-terminal head domain of Burkholderia pseudomallei BpaC has a striking hydrophilic core with an extensive solvente network

Autorzy: Kiessling A. R, Harris S. A, Weimer K. M, Wells G, Goldman A.
Opublikowane w: Mol Microbiology, 2022, ISSN 1365-2958
Wydawca: Wiley
DOI: 10.1111/mmi.14953

Different SARS-CoV-2 haplotypes associate with geographic origin and case fatality rates of COVID-19 patients

Autorzy: Goyal M, De Bruyne K, van Belkum A, West B
Opublikowane w: Infection Genetics and Evolution, Numer 90, 2021, ISSN 1567-1348
Wydawca: Elsevier BV
DOI: 10.1016/j.meegid.2021.104730

Automated antimicrobial susceptibility testing of slow-growing Pseudomonas aeruginosa strains in the presence of tetrazolium salt WST-1

Autorzy: Datar R, Perrin G, Chalansonnet V, Perry A, Perry JD, van Belkum A, Orenga S
Opublikowane w: Journal of Microbiological Methods, Numer 186, 2021, ISSN 0167-7012
Wydawca: Elsevier BV
DOI: 10.1016/j.mimet.2021.106252

The Trimeric Autotransporter Adhesin YadA of Yersina enterocolitica Serotype O:9 Binds Glycan Moieties

Autorzy: Meuskens I, Leva-Bueno J, Millner P, Schutz M, Peyman SA, Linke D.
Opublikowane w: Front Microbiology, Numer Volume 22, 2022, ISSN 1664-302X
Wydawca: Frontiers Media
DOI: 10.3389/fmicb.2021.738818

Interaction of Bartonella henselae with fibronectin represents the molecular basis for adhesion to host cells

Autorzy: Diana J. Vaca, Arno Thibau, Matthias S. Leisegang, Johan Malmström, Dirk Linke, Johannes A. Eble, Wibke Ballhorn, Martin Schaller, Lotta Happonen, Volkhard A. J. Kempf
Opublikowane w: Microbiology Spectrum, 2022, ISSN 2165-0497
Wydawca: American Society for Microbiology
DOI: 10.1128/spectrum.00598-22

A lab-on-a-chip platform for integrated extraction and detection of SARS-CoV-2 RNA in resource-limited settings

Autorzy: Pablo Rodriguez-Mateos, Bongkot Ngamsom, Cheryl Walter, Charlotte E.Dyer, Jesse Gitaka Alexander Iles, Nicole Pamme
Opublikowane w: Analytica Chimica Acta, Numer Volume 1177, 8 September 2021, 2021, Strona(/y) 338758, ISSN 0003-2670
Wydawca: Elsevier BV
DOI: 10.1016/j.aca.2021.338758

Distinct serotypes of streptococcal M proteins mediate fibrinogen-dependent platelet activation and pro-inflammatory effects

Autorzy: Palm F, Chowdhury S, Wettemark S, Malmström J, Happonen L, Shannon O
Opublikowane w: Infect Immunology, 2022, ISSN 2379-5077
Wydawca: ASM Journals
DOI: 10.1128/iai.00462-21

Contemporary diagnostics for medically relevant fastidious microorganisms belonging to the genera Anaplasma, Bartonella, Coxiella, Orientia and Rickettsia

Autorzy: Diana J. Vaca, Gerhard Dobler, Silke F. Fischer, Christian Keller, Maik Konrad, Friederike D. von Loewenich, Sylvain Orenga, Siddhesh U. Sapre, Alex van Belkum, Volkhard A. J. Kempf
Opublikowane w: FEMS Microbiology Reviews, Numer fuac013, 2022, ISSN 0168-6445
Wydawca: Blackwell
DOI: 10.1093/femsre/fuac013

Immunogenicity of trimeric autotransporter adhesins and their potential as vaccine targets

Autorzy: Arno Thibau, Alexander A. Dichter, Diana J. Vaca, Dirk Linke, Adrian Goldman, Volkhard A. J. Kempf
Opublikowane w: Medical Microbiology and Immunology, 2019, ISSN 0300-8584
Wydawca: Springer Verlag
DOI: 10.1007/s00430-019-00649-y

Interaction with the host: the role of fibronectin and extracellular matrix proteins in the adhesion of Gram-negative bacteria

Autorzy: Diana J. Vaca, Arno Thibau, Monika Schütz, Peter Kraiczy, Lotta Happonen, Johan Malmström, Volkhard A. J. Kempf
Opublikowane w: Medical Microbiology and Immunology, 2019, ISSN 0300-8584
Wydawca: Springer Verlag
DOI: 10.1007/s00430-019-00644-3

Recent advances in the understanding of trimeric autotransporter adhesions

Autorzy: Andreas R. Kiessling, Anchal Malik, Adrian Goldman
Opublikowane w: Medical Microbiology and Immunology (2019), 2019, ISSN 0300-8584
Wydawca: Springer Verlag
DOI: 10.1007/s00430-019-00652-3

Brexit in the channel: Europe cut off: a young German scientist's perspective

Autorzy: Andreas R. Kiessling
Opublikowane w: Medical Microbiology and Immunology, 2019, ISSN 0300-8584
Wydawca: Springer Verlag
DOI: 10.1007/s00430-019-00646-1

Human adenovirus binding to host cell receptors: a structural view

Autorzy: Aleksandra Cecylia Stasiak, Thilo Stehle
Opublikowane w: Medical Microbiology and Immunology, 2019, ISSN 0300-8584
Wydawca: Springer Verlag
DOI: 10.1007/s00430-019-00645-2

FISH and chips: a review of microfluidic platforms for FISH analysis

Autorzy: Pablo Rodriguez-Mateos, Nuno Filipe Azevedo, Carina Almeida, Nicole Pamme
Opublikowane w: Medical Microbiology and Immunology, 2020, ISSN 0300-8584
Wydawca: Springer Verlag
DOI: 10.1007/s00430-019-00654-1

Advances in high-throughput methods for the identification of virus receptors

Autorzy: Sarah V. Barrass, Sarah J. Butcher
Opublikowane w: Medical Microbiology and Immunology, 2019, ISSN 0300-8584
Wydawca: Springer Verlag
DOI: 10.1007/s00430-019-00653-2

Innovative training networks: a new way of collaboration-propped PhD training

Autorzy: Ina Meuskens, Seamus Higson, Dirk Linke
Opublikowane w: Medical Microbiology and Immunology, 2019, ISSN 0300-8584
Wydawca: Springer Verlag
DOI: 10.1007/s00430-019-00647-0

New solutions to capture and enrich bacteria from complex samples

Autorzy: Maria G. Sande, Tugçe Çaykara, Carla Joana Silva, Ligia R. Rodrigues
Opublikowane w: Medical Microbiology and Immunology, 2020, ISSN 0300-8584
Wydawca: Springer Verlag
DOI: 10.1007/s00430-020-00659-1

Structural proteomics, electron cryo-microscopy and structural modeling approaches in bacteria–human protein interactions

Autorzy: Sounak Chowdhury, Lotta Happonen, Hamed Khakzad, Lars Malmström, Johan Malmström
Opublikowane w: Medical Microbiology and Immunology, 2020, ISSN 0300-8584
Wydawca: Springer Verlag
DOI: 10.1007/s00430-020-00663-5

Phenotypic and Genomic Variability of Serial Peri-Lung Transplantation Pseudomonas aeruginosa Isolates From Cystic Fibrosis Patients

Autorzy: Datar R, Coello Pelegrin A, Orenga S, Chalansonnet V, Mirande C, Dombrecht J, Perry JD, Perry A, Goossens H, van Belkum A
Opublikowane w: Frontiers in Microbiology, Numer Volume 12, 2021, ISSN 1664-302X
Wydawca: Frontiers Media
DOI: 10.3389/fmicb.2021.604555

Recent Advances in Rapid Antimicrobial Susceptibility Testing

Autorzy: Datar R, Orenge S, Pogorelcnik R, Rochas O, Simner PJ, van Belkum A
Opublikowane w: Clinical Chemistry, Numer Volume 68, Numer 1, 2021, ISSN 0009-9147
Wydawca: American Association for Clinical Chemistry, Inc.
DOI: 10.1093/clinchem/hvab207

Streptococcus pyogenes Forms Serotype- and Local Environment-Dependent Interspecies Protein Complexes

Autorzy: Chowdhury S, Khakzad H, Bergdahl GE, Lood R, Ekström S, Linke D, Malmström L, Happonen L, Malmström J.
Opublikowane w: mSystems, 2021, ISSN 2379-5077
Wydawca: ASM Journals
DOI: 10.1128/msystems.00271-21

Retrospective Definition of Clostridioides difficile PCR Ribotypes on the Basis of Whole Genome Polymorphisms: A Proof of Principle Study

Autorzy: Goyal M, Hauben L, Pouseele H, Jaillard M, De Bruyne K, van Belkum A, Goering R
Opublikowane w: Diagnostics, Numer 10(12), 2020, ISSN 2075-4418
Wydawca: MDPI
DOI: 10.3390/diagnostics10121078

Proteome-wide cross-linking mass spectrometry to identify specific virus capsid-host interactions between tick-borne encephalitis virus and neuroblastoma cells

Autorzy: Barrass S. V, Pulkkinen L.I.A, Vapalahti O, Kuivanen S. H, Anastasina M, Happonen L, Butcher S. J.
Opublikowane w: bioRxiv, 2021, ISSN 2692-8205
Wydawca: Cold Spring Harbor Laboratory
DOI: 10.1101/2021.10.29.464531

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