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Past, present and future of turbid reefs in the Coral Triangle

Periodic Reporting for period 1 - 4D_REEF (Past, present and future of turbid reefs in the Coral Triangle)

Okres sprawozdawczy: 2019-09-01 do 2021-08-31

Can turbid coastal environments provide a refuge for coral reefs in periods of warm climate?

Coral reefs are the most highly valued marine ecosystems in the world. However, they are also among the most severely threatened ecosystems by a combination of global threats related to anthropogenic CO2 emissions, as well as more local impacts, including, but not limited to, pollution and overexploitation. At the same time, these reefs are also the most diverse ecosystems in the world, hosting a wealth of species many of which have not been discovered yet. The Coral Triangle, roughly spanning Indonesia, Malaysia, the Philippines and Papua New Guinea, has the most diverse marine ecosystems on Earth, a global biodiversity hotspot. However, they are in close proximity to areas with high human population densities, often depending on the reefs for sustenance. Will these reefs stand a chance in the future with ongoing climate change and pollution?

In 4D-REEF we explore the role of turbid reef habitats in preserving future coral reefs. Analyses of fossil data show that reefs living in so-called turbid habitats, characterized by the influence of terrestrial runoff, played an important role in the origins and maintenance of the coral reefs in the Coral Triangle over the past 25 million years. Usually these reefs are considered as occurring in marginal conditions, but we think that they might have a role in preserving future coral reefs. High coral cover and recruitment on present-day reefs suggests that, despite the presence of large human populations, turbid reefs have the capacity to withstand environmental pressures. In combination with future projections of environmental conditions, we use information of past and present states of reef ecosystems to forecast future trajectories of turbid reef habitats, biota and ecosystem function.

Why is it important for society?

Corals are important for coastal communities for economical revenue, wave and coastal flood protection and biodiversity. The latter is also crucial for food variability, a stable ecosystem, and recreational benefits. Without the coral reef or under decaying reef conditions, the coastal communities could lose the natural barrier from the waves possibly resulting in a destroyed coast, severe damages to nearshore housing and salty water floods that ruin agricultural land and contaminate drinking water sources. Understanding the optimal conditions for coral reef development is important for designing management actions to protect the coral reefs.

What are the overall objectives?

In 4D-REEF we integrate examples from the greenhouse Pliocene, the pre-human Holocene, and the recent to feed into models to predict the future of coral reefs. The Pliocene was the most recent period with a concentration of greenhouse gases comparable to current levels. Investigating Pliocene reefs will provide insight into how greenhouse reefs functioned, their species composition and their distribution. Early Holocene reefs are exposed to minimal human influence, and will be used to assess the biodiversity and ecosystem functioning of pristine reefs. These results will be compared to data from modern reefs.

1. What was the biodiversity of turbid reefs in the past and in what habitats did the reefs grow in past warmer periods of the Earth’s history, and how does this compare to the present?
2. What are the environmental constraints on ecosystem functions of turbid reefs?
3. How can we use information from past reefs to better understand the future trajectories of modern coral reefs, and apply this towards reef restoration actions?
In light of the COVID-19 pandemic most of the ESRs had to redesign their projects, since data collection in the field was not possible due to travel restrictions. The field campaigns planned for 2020 and 2021 had to be cancelled.

In WP1 large steps were taken toward summarising the state-of-the-art of our understanding of coral reefs and their inhabitants. Furthermore, ESR efforts have moved towards methodological development to speed up analysis once samples are obtained. Alternatively, ESRs have found creative ways to conduct research on their project topics despite not having access to planned samples or being able to complete planned secondments. Similarly, in WP2 the activities of the ESRs have focused on training in the methodologies to be applied in the different projects to field data and samples once collected, on literature reviews, and on alternative ways of conducting research on their project topics with data and samples from other sources.

One major strength of the ITN has been the willingness of our Indonesian colleagues and students from Universitas Hasanuddin (UNHAS) in Makassar to collaborate by deploying equipment and collecting observations essential to the research. In April 2021 they installed Autonomous Reef Monitoring Structures (ARMS; 18 in total), alongside temperature and light data loggers at 6 island-reef sites in the Spermonde Archipelago. ARMS are stacked PVC plates that act as recruitment units and are designed to simulate the narrow spaces of coral reefs, which promote the recruitment of small benthic and cryptic organisms. Multiple ESRs will be working together to process the samples and publish the results.

To date four papers have already been successfully published by the ESRs in peer-reviewed journals with a further seven manuscripts submitted and under review, and more in preparation. The majority of the ESRs also presented their research at the virtual International Coral Reef Symposium held in July 2021. One of the ESRs was a panelist at The MPA Guide: A Framework to Achieve Global Goals for the Ocean webinar, hosted by the UN Foundation. In addition, a total of 14 Masters, MEng, MSci, summer scholarship and undergraduate research students have been co-supervised by ESRs on projects associated with 4D-REEF research.
Adjusting to the COVID-19 pandemic, which coincided with the start of the majority of the ESR projects, has relied heavily on the flexibility of ESRs and supervisors involved in the project. Despite this we are well on track with achieving the project objectives.

18 Early Career Researchers are enrolled in Ph-D programs in European and one Indonesian university.

Despite limitations in their mobility we succeeded in creating a training program for the ESRs that will provide them with a solid background in tropical marine ecology, complemented by secondary skills to widen their career perspectives.

By actively collaborating with local institutions, for example by engaging three Indonesian PhD-students in the 4D-REEF training program and by involving researchers at Southeast Asian universities in the seminar series, we will enhance our local impact and disseminate our results not only in academia, but also in society.
Objectives of 4D-REEF
Picture of the 4D-REEF early stage researchers in Leiden in August 2021
Cartoon made by Elsa Girard, one of the ESRs, featuring her study organisms (benthic foraminifera)
Taxonomically detailed habitat maps using deep learning on hyperspectral images of coral reefs