Capacity Building at InBIO for Research and Innovation Using Environmental Metagenomics

Rezultaty

Report on the information for Horizon 2020 Key Performance Indicators

Report all publications (in the particular field of research) of the coordinator and of InBIO during the three years preceding the start date of the project, in order to prepare baseline information on Key Performance Indicators, as described in Task 1.3.

Data Management Plan

Document detailing the Data Management Plan, including information on what data the project will generate, how it will be exploited and made accessible for verification and re-use, and how it will be curated and preserved.

Minutes of Kick-off Meeting

Document providing the minutes of the kick-off meeting of the project.

Second Media Clipping of InBIO and EnvMetaGen impact

Report documenting how the ERA Chair and InBIO has featured in the media (newspapers, journals, TV, Radio), during the second 24-month period of the project.

Final Report

Final report of the project, detailing how each task was developed, and how the project fulfilled its objectives, meeting the overall goal of raising the capacity of InBIO, and its profile in the ERA.

Protocol for field collection and preservation of eDNA samples

Document detailing the development of best practice regarding the collection and conservation of eDNA samples, focusing on a wide range of potential applications that can help boosting InBIO’s capacity (e.g., water from lentic and lotic environments, bulk samples of terrestrial and freshwater organisms, vertebrate faecal material), as described in Task 4.2.

Protocol for next-gen analysis of eDNA samples

Document detailing the development of best practice for analysing eDNA samples, including procedures to solve outstanding challenges that have recently been identified.

Quality Plan

Document detailing the quality procedures and standards for all major project activities, as described in Task 1.1.

Protocol for the processing of DNA sequence data generated by next-gen platforms

Document detailing the development of best practice for analysing the outputs of next-gen DNA sequencing platforms, as described in Task 4.2.

First Progress Report

Report detailing the progress of the project during the first 15 months.

Second Progress Report

Report detailing the progress of the project during the first 36 months.

First Media Clipping of InBIO and EnvMetaGen impact

Report documenting how the ERA Chair and InBIO has featured in the media (newspapers, journals, TV, Radio), during the first 24 months of the project.

Protocol for building and organising reference collections of DNA sequences

Document detailing the development of best practice for building DNA reference collections of voucher specimens identified by specialised taxonomists, as detailed in Task 4.2.

Report on the selection process of the ERA Chair holder

Report on the selection process of the ERA Chair holder, including the text of the vacancy notice, places of publication, composition of the selection panel, CVs of applicants, minutes of selection panel meeting(s) as well as any other document allowing for a full assessment of the openness of the selection procedure.

Publikacje

A Conserved Notochord Enhancer Controls Pancreas Development in Vertebrates

Autorzy: João Pedro Amorim, Ana Gali-Macedo, Hugo Marcelino, Renata Bordeira-Carriço, Silvia Naranjo, Solangel Rivero-Gil, Joana Teixeira, Mafalda Galhardo, Joana Marques, José Bessa
Opublikowane w: Cell Reports, Numer 32/1, 2020, Strona(/y) 107862, ISSN 2211-1247
Wydawca: Cell Press
DOI: 10.1016/j.celrep.2020.107862

Speeding up the detection of invasive aquatic species using environmental DNA and nanopore sequencing

Autorzy: Bastian Egeter, Joana Veríssimo, Manuel Lopes-Lima, Joana Pinto, Nicoletta Riccardi, Pedro Beja and Nuno A Fonseca
Opublikowane w: bioRxiv, 2020, ISSN 0362-4331
Wydawca: New York Times Company

The InBIO Barcoding Initiative Database: DNA barcodes of Portuguese Diptera 01

Autorzy: Sonia Ferreira, Rui Andrade, Ana Gonçalves, Pedro Sousa, Joana Paupério, Nuno Fonseca, Pedro Beja
Opublikowane w: Biodiversity Data Journal, Numer 8, 2020, ISSN 1314-2828
Wydawca: Pensoft Publishers
DOI: 10.3897/bdj.8.e49985

The future of biotic indices in the ecogenomic era: Integrating (e)DNA metabarcoding in biological assessment of aquatic ecosystems

Autorzy: Jan Pawlowski, Mary Kelly-Quinn, Florian Altermatt, Laure Apothéloz-Perret-Gentil, Pedro Beja, Angela Boggero, Angel Borja, Agnès Bouchez, Tristan Cordier, Isabelle Domaizon, Maria Joao Feio, Ana Filipa Filipe, Riccardo Fornaroli, Wolfram Graf, Jelger Herder, Berry van der Hoorn, J. Iwan Jones, Marketa Sagova-Mareckova, Christian Moritz, Jose Barquín, Jeremy J. Piggott, Maurizio Pinna, Frederic
Opublikowane w: Science of The Total Environment, Numer 637-638, 2018, Strona(/y) 1295-1310, ISSN 0048-9697
Wydawca: Elsevier BV
DOI: 10.1016/j.scitotenv.2018.05.002

The InBIO Barcoding Initiative Database: contribution to the knowledge on DNA barcodes of Iberian Plecoptera

Autorzy: Sonia Ferreira, José Manuel Tierno de Figueroa, Filipa Martins, Joana Verissimo, Lorenzo Quaglietta, José Manuel Grosso-Silva, Pedro Lopes, Pedro Sousa, Joana Paupério, Nuno Fonseca, Pedro Beja
Opublikowane w: Biodiversity Data Journal, Numer 8, 2020, ISSN 1314-2828
Wydawca: Pensoft Publisher
DOI: 10.3897/bdj.8.e55137

Complete Genome Sequences of Walnut-Associated Xanthomonas euroxanthea Strains CPBF 367 and CPBF 426 Obtained by Illumina/Nanopore Hybrid Assembly

Autorzy: Miguel Teixeira, Leonor Martins, Camila Fernandes, Cátia Chaves, Joana Pinto, Fernando Tavares, Nuno A. Fonseca
Opublikowane w: Microbiology Resource Announcements, Numer 9/45, 2020, ISSN 2576-098X
Wydawca: American Society for Microbiology
DOI: 10.1128/mra.00902-20

High‐resolution multi‐marker DNA metabarcoding reveals sexual dietary differentiation in a bird with minor dimorphism

Autorzy: Luís P. Silva, Vanessa A. Mata, Pedro B. Lopes, Ricardo J. Lopes, Pedro Beja
Opublikowane w: Ecology and Evolution, Numer 10/19, 2020, Strona(/y) 10364-10373, ISSN 2045-7758
Wydawca: John Wiley and Sons Ltd
DOI: 10.1002/ece3.6687

Advancing the use of molecular methods for routine freshwater macroinvertebrate biomonitoring – the need for calibration experiments

Autorzy: Rosetta Blackman, Elvira Mächler, Florian Altermatt, Amanda Arnold, Pedro Beja, Pieter Boets, Bastian Egeter, Vasco Elbrecht, Ana Filipa Filipe, John Jones, Jan Macher, Markus Majaneva, Filipa Martins, Cesc Múrria, Kristian Meissner, Jan Pawlowski, Paul Schmidt Yáñez, Vera Zizka, Florian Leese, Benjamin Price, Kristy Deiner
Opublikowane w: Metabarcoding and Metagenomics, Numer 3, 2019, ISSN 2534-9708
Wydawca: Pensoft Publishers
DOI: 10.3897/mbmg.3.34735

Responses of soil microbiota and nematodes to application of organic and inorganic fertilizers in grassland columns

Autorzy: Israel Ikoyi, Bastian Egeter, Cátia Chaves, Mohammed Ahmed, Andrew Fowler, Achim Schmalenberger
Opublikowane w: Biology and Fertility of Soils, Numer 56/5, 2020, Strona(/y) 647-662, ISSN 0178-2762
Wydawca: Springer Verlag
DOI: 10.1007/s00374-020-01440-5

Efficient assessment of nocturnal flying insect communities by combining automatic light traps and DNA metabarcoding

Autorzy: Vanessa A. Mata, Sónia Ferreira, Rebeca M. Campos, Luís P. Silva, Joana Veríssimo, Martin F. V. Corley, Pedro Beja
Opublikowane w: Environmental DNA, 2020, ISSN 2637-4943
Wydawca: Wiley Online Library
DOI: 10.1002/edn3.125

Gastric Microbiome Diversities in Gastric Cancer Patients from Europe and Asia Mimic the Human Population Structure and Are Partly Driven by Microbiome Quantitative Trait Loci

Autorzy: Bruno Cavadas, Rui Camacho, Joana C. Ferreira, Rui M. Ferreira, Ceu Figueiredo, Alvis Brazma, Nuno A. Fonseca, Luísa Pereira
Opublikowane w: Microorganisms, Numer 8/8, 2020, Strona(/y) 1196, ISSN 2076-2607
Wydawca: MDPI
DOI: 10.3390/microorganisms8081196

Origin and history of Phoxinus (Cyprinidae) introductions in the Douro Basin (Iberian Peninsula): an update inferred from genetic data

Autorzy: Aina Garcia-Raventós, Filipa M. S. Martins, Amilcar Teixeira, Ronaldo Sousa, Elsa Froufe, Simone Varandas, Manuel Lopes-Lima, Pedro Beja, Ana Filipa Filipe
Opublikowane w: Biological Invasions, Numer 22/8, 2020, Strona(/y) 2409-2419, ISSN 1387-3547
Wydawca: Kluwer Academic Publishers
DOI: 10.1007/s10530-020-02279-5

First complete mitochondrial genomes of molossid bats (Chiroptera: Molossidae)

Autorzy: Vanessa A. Mata, Francisco Amorim, Antonio Guillén-Servent, Pedro Beja, Hugo Rebelo
Opublikowane w: Mitochondrial DNA Part B, Numer 2/1, 2017, Strona(/y) 152-154, ISSN 2380-2359
Wydawca: Taylor and Francis Online
DOI: 10.1080/23802359.2017.1298419

Modelling technical and biological biases in macroinvertebrate community assessment from bulk preservative using multiple metabarcoding markers

Autorzy: Filipa M. S. Martins, Miguel Porto, Maria J. Feio, Bastian Egeter, Aurélie Bonin, Sónia R. Q. Serra, Pierre Taberlet, Pedro Beja
Opublikowane w: Molecular Ecology, 2020, ISSN 0962-1083
Wydawca: Blackwell Publishing Inc.
DOI: 10.1111/mec.15620

Species detection from aquatic eDNA: Assessing the importance of capture methods

Autorzy: Sara Peixoto, Cátia Chaves, Guillermo Velo‐Antón, Pedro Beja, Bastian Egeter
Opublikowane w: Environmental DNA, 2020, ISSN 2637-4943
Wydawca: John Wiley & Sons Ltd/Wiley Online Library
DOI: 10.1002/edn3.130

How much is enough? Effects of technical and biological replication on metabarcoding dietary analysis

Autorzy: Vanessa A. Mata, Hugo Rebelo, Francisco Amorim, Gary F. McCracken, Simon Jarman, Pedro Beja
Opublikowane w: Molecular Ecology, Numer 28/2, 2018, Strona(/y) 165-175, ISSN 0962-1083
Wydawca: Blackwell Publishing Inc.
DOI: 10.1111/mec.14779

DNA barcoding of Sialis sp. (Megaloptera) in Portugal: the missing tool to species identification

Autorzy: Sónia Ferreira, Joana Paupério, José Manuel Grosso-Silva, Pedro Beja
Opublikowane w: Aquatic Insects, Numer 40/2, 2019, Strona(/y) 173-184, ISSN 0165-0424
Wydawca: Swets & Zeitlinger
DOI: 10.1080/01650424.2019.1571612

Glacial cycles drive rapid divergence of cryptic field vole species

Autorzy: Nicholas K. Fletcher, Pelayo Acevedo, Jeremy S. Herman, Joana Paupério, Paulo C. Alves, Jeremy B. Searle
Opublikowane w: Ecology and Evolution, Numer 9/24, 2019, Strona(/y) 14101-14113, ISSN 2045-7758
Wydawca: John Wiley and Sons Ltd
DOI: 10.1002/ece3.5846

Drivers of survival in a small mammal of conservation concern: An assessment using extensive genetic non-invasive sampling in fragmented farmland

Autorzy: António Proença-Ferreira, Clara Ferreira, Inês Leitão, Joana Paupério, Helena Sabino-Marques, Soraia Barbosa, Xavier Lambin, Paulo Célio Alves, Pedro Beja, Francisco Moreira, António Mira, Ricardo Pita
Opublikowane w: Biological Conservation, Numer 230, 2019, Strona(/y) 131-140, ISSN 0006-3207
Wydawca: Elsevier BV
DOI: 10.1016/j.biocon.2018.12.021

What Is the Giant Wall Gecko Having for Dinner? Conservation Genetics for Guiding Reserve Management in Cabo Verde

Autorzy: Catarina Pinho, Bárbara Santos, Vanessa Mata, Mariana Seguro, Maria Romeiras, Ricardo Lopes, Raquel Vasconcelos
Opublikowane w: Genes, Numer 9/12, 2018, Strona(/y) 599, ISSN 2073-4425
Wydawca: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/genes9120599

Hidden in our pockets: building of a DNA barcode library unveils the first record of Myotis alcathoe for Portugal

Autorzy: Hugo Rebelo, Sónia Ferreira, Francisco Amorim, Pedro Horta, Helena Raposeira, Helena Santos, Pedro Beja, Vanessa Mata
Opublikowane w: Biodiversity Data Journal, Numer 8, 2020, ISSN 1314-2828
Wydawca: Pensoft Publisher
DOI: 10.3897/bdj.8.e54479

New and interesting Portuguese Lepidoptera records from 2018 (Insecta: Lepidoptera)

Autorzy: MFV Corley, J Nunes, J Rosete and S Ferreira
Opublikowane w: SHILAP Revista de lepidopterología, 2019, ISSN 0300-5267
Wydawca: Sociedad Hispano-Luso-Americana de Lepidopterologia

Intricate trophic links between threatened vertebrates confined to a small island in the Atlantic Ocean

Autorzy: Ricardo J. Lopes, Catarina J. Pinho, Bárbara Santos, Mariana Seguro, Vanessa A. Mata, Bastian Egeter, Raquel Vasconcelos
Opublikowane w: Ecology and Evolution, Numer 9/8, 2019, Strona(/y) 4994-5002, ISSN 2045-7758
Wydawca: John Wiley and Sons Ltd
DOI: 10.1002/ece3.5105

A taxonomic revision of the Western Palaearctic genus Cacochroa Heinemann, 1870 (Lepidoptera, Depressariidae, Cryptolechiinae) with description of a new genus and a new species

Autorzy: MARTIN CORLEY, SÓNIA FERREIRA
Opublikowane w: Zootaxa, Numer 4683/2, 2019, Strona(/y) 197-214, ISSN 1175-5326
Wydawca: Magnolia Press
DOI: 10.11646/zootaxa.4683.2.2

Genetic non-invasive sampling (gNIS) as a cost-effective tool for monitoring elusive small mammals

Autorzy: Clara Mendes Ferreira, Helena Sabino-Marques, Soraia Barbosa, Pedro Costa, Cláudia Encarnação, Russell Alpizar-Jara, Ricardo Pita, Pedro Beja, António Mira, Jeremy B. Searle, Joana Paupério, Paulo Célio Alves
Opublikowane w: European Journal of Wildlife Research, Numer 64/4, 2018, ISSN 1612-4642
Wydawca: Springer Verlag
DOI: 10.1007/s10344-018-1188-8

Taxonomic notes on Portuguese Microlepidoptera II. Cochylimorpha punctiferana (Ragonot, 1881) stat. rev., a neglected Portuguese species (Lepidoptera: Tortricidae)

Autorzy: MFV Corely and S Ferreira
Opublikowane w: SHILAP Revista de lepidopterología, 2020, ISSN 0300-5267
Wydawca: Sociedad Hispano-Luso-Americana de Lepidopterologia

Optimised scat collection protocols for dietary DNA metabarcoding in vertebrates

Autorzy: Julie C. McInnes, Rachael Alderman, Bruce E. Deagle, Mary-Anne Lea, Ben Raymond, Simon N. Jarman
Opublikowane w: Methods in Ecology and Evolution, 2016, ISSN 2041-210X
Wydawca: John Wiley and Sons Inc.
DOI: 10.1111/2041-210X.12677

Borkhausenia crimnodes Meyrick, 1912 (Lepidoptera, Oecophoridae), a southern hemisphere species resident in Portugal

Autorzy: Martin F.V. Corley, Sónia Ferreira, Alexander L. Lvovsky, Jorge Rosete
Opublikowane w: Nota Lepidopterologica, Numer 40/1, 2017, Strona(/y) 15-24, ISSN 0342-7536
Wydawca: Apollo Books
DOI: 10.3897/nl.40.10938

DNA Barcoding reveals sexual dimorphism in Isotrias penedana Trematerra, 2013 (Lepidoptera: Tortricidae, Chlidanotinae)

Autorzy: MARTIN FRANCIS VANNER CORLEY, SÓNIA FERREIRA
Opublikowane w: Zootaxa, Numer 4221/5, 2017, Strona(/y) 594, ISSN 1175-5326
Wydawca: Magnolia Press
DOI: 10.11646/zootaxa.4221.5.7

Complete Genomic Sequences of Rabbit Hemorrhagic Disease Virus G1 Strains Isolated in the European Rabbit Original Range

Autorzy: J. Abrantes, A. M. Lopes, P. J. Esteves
Opublikowane w: Journal of Virology, Numer 0022538X, 2012, Strona(/y) 13886-13886, ISSN 0022-538X
Wydawca: American Society for Microbiology
DOI: 10.1128/JVI.02683-12

Identification, Rearing, and Distribution of Stick Insects of Madeira Island: An Example of Raising Biodiversity Awareness

Autorzy: António M. F. Aguiar, Dora Aguin Pombo, Ysabel M. Gonçalves
Opublikowane w: Journal of Insect Science, Numer 15362442, 2014, Strona(/y) 1-13, ISSN 1536-2442
Wydawca: Library of the University of Arizona
DOI: 10.1673/031.014.49

Pathways for resilience in Mediterranean cork oak land use systems

Autorzy: Vanda Acácio, Milena Holmgren
Opublikowane w: Annals of Forest Science, Numer 12864560, 2014, Strona(/y) 5-13, ISSN 1286-4560
Wydawca: Springer Verlag
DOI: 10.1007/s13595-012-0197-0

Cryptic Speciation Patterns in Iranian Rock Lizards Uncovered by Integrative Taxonomy

Autorzy: Faraham Ahmadzadeh, Morris Flecks, Miguel A. Carretero, Omid Mozaffari, Wolfgang Böhme, D. James Harris, Susana Freitas, Dennis Rödder
Opublikowane w: PLoS ONE, Numer 19326203, 2013, Strona(/y) e80563, ISSN 1932-6203
Wydawca: Public Library of Science
DOI: 10.1371/journal.pone.0080563

Shifting protected areas: scheduling spatial priorities under climate change

Autorzy: Diogo Alagador, Jorge Orestes Cerdeira, Miguel Bastos Araújo
Opublikowane w: Journal of Applied Ecology, Numer 00218901, 2014, Strona(/y) 703-713, ISSN 0021-8901
Wydawca: Blackwell Publishing Inc.
DOI: 10.1111/1365-2664.12230

Climate, social factors and research disturbance influence population dynamics in a declining sociable weaver metapopulation

Autorzy: Res Altwegg, Claire Doutrelant, Mark D. Anderson, Claire N. Spottiswoode, Rita Covas
Opublikowane w: Oecologia, Numer 00298549, 2014, Strona(/y) 413-425, ISSN 0029-8549
Wydawca: Springer Verlag
DOI: 10.1007/s00442-013-2768-7

Genetic diversity of Plasmodium falciparum and distribution of drug resistance haplotypes in Yemen

Autorzy: Salama Al-Hamidhi, Mohammed AK Mahdy, Zainab Al-Hashami, Hissa Al-Farsi, Abdulsalam M Al-mekhlafi, Mohamed A Idris, Albano Beja-Pereira, Hamza A Babiker
Opublikowane w: Malaria Journal, Numer 14752875, 2013, Strona(/y) 244, ISSN 1475-2875
Wydawca: BioMed Central
DOI: 10.1186/1475-2875-12-244

Indicators of movement and space use for two co-occurring invasive crayfish species

Autorzy: P.M. Anastácio, F. Banha, C. Capinha, J.M. Bernardo, A.M. Costa, A. Teixeira, S. Bruxelas
Opublikowane w: Ecological Indicators, Numer 1470160X, 2015, Strona(/y) 171-181, ISSN 1470-160X
Wydawca: Elsevier BV
DOI: 10.1016/j.ecolind.2015.01.019

Genetic diversity, structure and conservation of the endangered Cantabrian Capercaillie in a unique peripheral habitat

Autorzy: Fernando Alda, Manuel A. González, Pedro P. Olea, Vicente Ena, Raquel Godinho, Sergei V. Drovetski
Opublikowane w: European Journal of Wildlife Research, Numer 16124642, 2013, Strona(/y) 719-728, ISSN 1612-4642
Wydawca: Springer Verlag
DOI: 10.1007/s10344-013-0727-6

Designing Optimized Multi-Species Monitoring Networks to Detect Range Shifts Driven by Climate Change: A Case Study with Bats in the North of Portugal

Autorzy: Francisco Amorim, Sílvia B. Carvalho, João Honrado, Hugo Rebelo
Opublikowane w: PLoS ONE, Numer 19326203, 2014, Strona(/y) e87291, ISSN 1932-6203
Wydawca: Public Library of Science
DOI: 10.1371/journal.pone.0087291

Effects of hunting management on Mediterranean farmland birds

Autorzy: JESÚS CARO, MIGUEL DELIBES-MATEOS, ALBA ESTRADA, RUI BORRALHO, LUÍS GORDINHO, LUÍS REINO, PEDRO BEJA, BEATRIZ ARROYO
Opublikowane w: Bird Conservation International, Numer 09592709, 2015, Strona(/y) 166-181, ISSN 0959-2709
Wydawca: Cambridge University Press
DOI: 10.1017/S0959270914000197

Sete Cidades and Furnas lake eutrophication (São Miguel, Azores): Analysis of long-term monitoring data and remediation measures

Autorzy: J. Virgílio Cruz, Dina Pacheco, João Porteiro, Raquel Cymbron, Sandra Mendes, Andrea Malcata, César Andrade
Opublikowane w: Science of The Total Environment, Numer 00489697, 2015, Strona(/y) 168-186, ISSN 0048-9697
Wydawca: Elsevier BV
DOI: 10.1016/j.scitotenv.2015.03.052

Conifer-plantation thinning restores reptile biodiversity in Mediterranean landscapes

Autorzy: Jairo S. Azor, Xavier Santos, Juan M. Pleguezuelos
Opublikowane w: Forest Ecology and Management, Numer 03781127, 2015, Strona(/y) 185-189, ISSN 0378-1127
Wydawca: Elsevier BV
DOI: 10.1016/j.foreco.2015.06.020

Revisiting the Iberian honey bee ( Apis mellifera iberiensis ) contact zone: maternal and genome-wide nuclear variations provide support for secondary contact from historical refugia

Autorzy: Julio Chávez-Galarza, Dora Henriques, J. Spencer Johnston, Miguel Carneiro, José Rufino, John C. Patton, M. Alice Pinto
Opublikowane w: Molecular Ecology, Numer 09621083, 2015, Strona(/y) 2973-2992, ISSN 0962-1083
Wydawca: Blackwell Publishing Inc.
DOI: 10.1111/mec.13223

exonsampler : a computer program for genome-wide and candidate gene exon sampling for targeted next-generation sequencing

Autorzy: Ted Cosart, Albano Beja-Pereira, Gordon Luikart
Opublikowane w: Molecular Ecology Resources, Numer 1755098X, 2014, Strona(/y) 1296-1301, ISSN 1755-098X
Wydawca: Blackwell Publishing Inc.
DOI: 10.1111/1755-0998.12267

The dispersal of alien species redefines biogeography in the Anthropocene

Autorzy: C. Capinha, F. Essl, H. Seebens, D. Moser, H. M. Pereira
Opublikowane w: Science, Numer 00368075, 2015, Strona(/y) 1248-1251, ISSN 0036-8075
Wydawca: American Association for the Advancement of Science
DOI: 10.1126/science.aaa8913

ENiRG: R-GRASS interface for efficiently characterizing the ecological niche of species and predicting habitat suitability

Autorzy: F. Cánovas, C. Magliozzi, F. Mestre, J. A. Palazón, M. González-Wangüemert
Opublikowane w: Ecography, Numer 09067590, 2015, Strona(/y) n/a-n/a, ISSN 0906-7590
Wydawca: Blackwell Publishing Inc.
DOI: 10.1111/ecog.01426

Unravelling biodiversity, evolution and threats to conservation in the Sahara-Sahel

Autorzy: José C. Brito, Raquel Godinho, Fernando Martínez-Freiría, Juan M. Pleguezuelos, Hugo Rebelo, Xavier Santos, Cândida G. Vale, Guillermo Velo-Antón, Zbyszek Boratyński, Sílvia B. Carvalho, Sónia Ferreira, Duarte V. Gonçalves, Teresa L. Silva, Pedro Tarroso, João C. Campos, João V. Leite, Joana Nogueira, Francisco Álvares, Neftalí Sillero, Andack S. Sow, Soumia Fahd, Pierre-André Crochet, Salvador Carranza
Opublikowane w: Biological Reviews, Numer 14647931, 2014, Strona(/y) 215-231, ISSN 1464-7931
Wydawca: Cambridge University Press
DOI: 10.1111/brv.12049

Tools for exploring habitat suitability for steppe birds under land use change scenarios

Autorzy: Laura Cardador, Miquel De Cáceres, David Giralt, Gerard Bota, Núria Aquilué, Beatriz Arroyo, François Mougeot, Carlos Cantero-Martínez, Lourdes Viladomiu, Jordi Rosell, Fabián Casas, Alba Estrada, Jorge Álvaro-Fuentes, Lluís Brotons
Opublikowane w: Agriculture, Ecosystems & Environment, Numer 01678809, 2015, Strona(/y) 119-125, ISSN 0167-8809
Wydawca: Elsevier BV
DOI: 10.1016/j.agee.2014.11.013

New species of Rissoidae (Mollusca, Gastropoda) from the Archipelago of the Azores (northeast Atlantic) with an updated regional checklist for the family

Autorzy: Ricardo Cordeiro, Sérgio Ávila
Opublikowane w: ZooKeys, Numer 13132989, 2015, Strona(/y) 1-19, ISSN 1313-2989
Wydawca: Pensoft Publishers
DOI: 10.3897/zookeys.480.8599

Temporally unpredictable supplementary feeding may benefit endangered scavengers

Autorzy: Eneko Arrondo, Ainara Cortés-Avizanda, José Antonio Donázar
Opublikowane w: Ibis, Numer 00191019, 2015, Strona(/y) 648-651, ISSN 0019-1019
Wydawca: Blackwell Publishing Inc.
DOI: 10.1111/ibi.12267

A multi-scale analysis to support the implementation of a regional conservation policy in a small-island archipelago – the Azores, Portugal.

Autorzy: Helena Calado, Chiara Bragagnolo, Susana F. Silva, Margarida Pereira
Opublikowane w: Journal of Coastal Research, Numer 07490208, 2014, Strona(/y) 485-489, ISSN 0749-0208
Wydawca: Coastal Education & Research Foundation, Inc.
DOI: 10.2112/SI70-082.1

Widespread presence of the pathogenic fungus Batrachochytrium dendrobatidis in wild amphibian communities in Madagascar

Autorzy: Molly C. Bletz, Gonçalo M. Rosa, Franco Andreone, Elodie A. Courtois, Dirk S. Schmeller, Nirhy H. C. Rabibisoa, Falitiana C. E. Rabemananjara, Liliane Raharivololoniaina, Miguel Vences, Ché Weldon, Devin Edmonds, Christopher J. Raxworthy, Reid N. Harris, Matthew C. Fisher, Angelica Crottini
Opublikowane w: Scientific Reports, Numer 20452322, 2015, Strona(/y) 8633, ISSN 2045-2322
Wydawca: Nature Publishing Group
DOI: 10.1038/srep08633

Genetic identification of Iberian rodent species using both mitochondrial and nuclear loci: application to noninvasive sampling

Autorzy: S. Barbosa, J. Pauperio, J. B. Searle, P. C. Alves
Opublikowane w: Molecular Ecology Resources, Numer 1755098X, 2013, Strona(/y) 43-56, ISSN 1755-098X
Wydawca: Blackwell Publishing Inc.
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Arthropod Diversity in a Tropical Forest

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Does local habitat fragmentation affect large-scale distributions? The case of a specialist grassland bird

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Documenting Biogeographical Patterns of African Timber Species Using Herbarium Records: A Conservation Perspective Based on Native Trees from Angola

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Genetic identification of endangered North African ungulates using noninvasive sampling

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Taxonomic and functional response of a Mediterranean reptile assemblage to a repeated fire regime

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Conservation of Portuguese red-listed bryophytes species in Portugal: Promoting a shift in perspective on climate changes

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Coccidiosis in European rabbit (Oryctolagus cuniculus algirus) populations in the Iberian Peninsula

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Splitting or Lumping? A Conservation Dilemma Exemplified by the Critically Endangered Dama Gazelle (Nanger dama)

Autorzy: Helen Senn, Lisa Banfield, Tim Wacher, John Newby, Thomas Rabeil, Jennifer Kaden, Andrew C. Kitchener, Teresa Abaigar, Teresa Luísa Silva, Mike Maunder, Rob Ogden
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Diversity of cloacal microbial community in migratory shorebirds that use the Tagus estuary as stopover habitat and their potential to harbor and disperse pathogenic microorganisms

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A spatially explicit approach to assess the collision risk between birds and overhead power lines: A case study with the little bustard

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Divide to conquer: a complex pattern of biodiversity depicted by vertebrate components in the Brazilian Atlantic Forest

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New nuclear primers for molecular studies of Epinephelidae fishes

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Patterns of genetic diversity in Hepatozoon spp. infecting snakes from North Africa and the Mediterranean Basin

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Hepatozoon Infection Prevalence in Four Snake Genera: Influence of Diet, Prey Parasitemia Levels, or Parasite Type?

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Assessing the impact of reforestation on the diversity of Mediterranean terrestrial Gastropoda

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Landscape of amphibian diversity in Latium Region: peaks, valleys and gaps of conservation priority

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New alien barnacles in the Azores and some remarks on the invasive potential of Balanidae

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An integrative taxonomic revision of the Tarentola geckos (Squamata, Phyllodactylidae) of the Cape Verde Islands

Autorzy: RAQUEL VASCONCELOS, ANA PERERA, PHILIPPE GENIEZ, D. JAMES HARRIS, SALVADOR CARRANZA
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Applying species distribution modelling to the conservation of an ecologically plastic species (Papio papio) across biogeographic regions in West Africa

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Genetic Divergence for the Amphibian Pleurodeles waltl in Southwest Portugal: Dispersal Barriers Shaping Geographic Patterns

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First estimates of genetic diversity for the highly endangered giant sable antelope using a set of 57 microsatellites

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DNA barcoding assessment of genetic variation in two widespread skinks from Madagascar, Trachylepis elegans and T. gravenhorstii (Squamata: Scincidae)

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Risk assessment for Iberian birds under global change

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Cryptic patterns of diversification of a widespread Amazonian Woodcreeper species complex (Aves: Dendrocolaptidae) inferred from multilocus phylogenetic analysis: Implications for historical biogeography and taxonomy

Autorzy: Tiago Sousa-Neves, Alexandre Aleixo, Fernando Sequeira
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Species diversity of the deep-water gulper sharks (Squaliformes: Centrophoridae: Centrophorus ) in North Atlantic waters - current status and taxonomic issues

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Identifying priority areas for island endemics using genetic versus specific diversity – The case of terrestrial reptiles of the Cape Verde Islands

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Review of the distribution and conservation status of the terrestrial reptiles of the Cape Verde Islands

Autorzy: Raquel Vasconcelos, José Carlos Brito, Salvador Carranza, D. James Harris
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Wydawca: Cambridge University Press
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The concept of the Portuguese National Ecological Reserve: constraints and impossibilities in the Azores Archipelago

Autorzy: Marta Horta de Sousa Vergílio, Helena Maria Gregório Pina Calado
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Molecular Assessment of Apicomplexan Parasites in the Snake Psammophis from North Africa: Do Multiple Parasite Lineages Reflect the Final Vertebrate Host Diet?

Autorzy: Beatriz Tomé, João P. M. C. Maia, D. James Harris
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Can we predict habitat quality from space? A multi-indicator assessment based on an automated knowledge-driven system

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New Records of Insect Pest Species Associated with Cashew, Anacardium occidentale L. (Anacardiaceae), in Guinea-Bissau

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Trophic ecology and bioindicator potential of the North Atlantic tope shark

Autorzy: Paulo Torres, Regina Tristão da Cunha, Rodrigo Maia, Armindo dos Santos Rodrigues
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Challenges for assessing vertebrate diversity in turbid Saharan water-bodies using environmental DNA

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Wydawca: NRC Research Press
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Mondeguina, a new genus for Apatetris mediterranella Nel & Varenne, 2012, with description of a new species from Portugal (Lepidoptera, Gelechiidae)

Autorzy: Martin F. V. Corley, Jorge Rosete, Sónia Ferreira
Opublikowane w: Nota Lepidopterologica, Numer 43, 2020, Strona(/y) 151-166, ISSN 0342-7536
Wydawca: Apollo Books
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Advancing the integration of multi‐marker metabarcoding data in dietary analysis of trophic generalists

Autorzy: Luís P. Silva, Vanessa A. Mata, Pedro B. Lopes, Paulo Pereira, Simon N. Jarman, Ricardo J. Lopes, Pedro Beja
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Using molecular diet analysis to inform invasive species management: A case study of introduced rats consuming endemic New Zealand frogs

Autorzy: Bastian Egeter, Cailín Roe, Sara Peixoto, Pamela Puppo, Luke J. Easton, Joana Pinto, Phillip J. Bishop, Bruce C. Robertson
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Wydawca: John Wiley and Sons Ltd
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Ypsolopha rhinolophi sp. nov. (Lepidoptera: Ypsolophidae), a new species from Portugal and France unveiled by bats

Autorzy: MARTIN CORLEY, SÓNIA FERREIRA, VANESSA A. MATA
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Wesmaelius (Kimninsia) nervosus (Fabricius, 1793) (Neuroptera, Hemerobiidae) a new species of brown lacewing for the Portuguese fauna

Autorzy: Daniel Oliveira and Sónia Ferreira
Opublikowane w: Asociación española de Entomología, 2020, ISSN 0210-8984
Wydawca: Universitat de Valencia

Depressaria infernella Corley & Buchner, a new Iberian species of the Depressaria douglasella group (Lepidoptera: Depressariidae)

Autorzy: MFV Corley, P Buchner and S Ferreira
Opublikowane w: SHILAP, 2019, ISSN 0300-5267
Wydawca: Sociedad Hispano-Luso-Americana de Lepidopterologia

Have the cake and eat it: Optimizing nondestructive DNA metabarcoding of macroinvertebrate samples for freshwater biomonitoring

Autorzy: Filipa M. S. Martins, Mafalda Galhardo, Ana F. Filipe, Amílcar Teixeira, Paulo Pinheiro, Joana Paupério, Paulo C. Alves, Pedro Beja
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Wydawca: Blackwell Publishing Inc.
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Conservation and Genetics of Populations

Autorzy: Allendorf FW, Luikart G, Aitken S
Opublikowane w: 2012, ISBN 978-0-470-67145-0
Wydawca: Wiley-Blackwell

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