Publikacje Peer reviewed articles (10) Inferring the multiplicity of founder variants initiating HIV-1 infection: a systematic review and individual patient data meta-analysis Autorzy: James Baxter, Sarah Langhorne, Ting Shi, Damien C Tully, Ch Julián Villabona-Arenas, Stéphane Hué, Jan Albert, Andrew Leigh Brown, Katherine E Atkins Opublikowane w: Lancet Microbe, 2023, ISSN 2666-5247 Wydawca: Elsevier DOI: 10.1016/s2666-5247(22)00327-5 Characterising within-hospital SARS-CoV-2 transmission events using epidemiological and viral genomic data across two pandemic waves Autorzy: Benjamin B. Lindsey, Ch. Julián Villabona-Arenas, Finlay Campbell, Alexander J. Keeley, Matthew D. Parker, Dhruv R. Shah, Helena Parsons, Peijun Zhang, Nishchay Kakkar, Marta Gallis, Benjamin H. Foulkes, Paige Wolverson, Stavroula F. Louka, Stella Christou, Amy State, Katie Johnson, Mohammad Raza, Sharon Hsu, Thibaut Jombart, Anne Cori, Sheffield COVID-19 Genomics Group, The COVID-19 Genomics UK Opublikowane w: Nature Communications, 2022, ISSN 2041-1723 Wydawca: Nature Publishing Group DOI: 10.1038/s41467-022-28681-2 Estimated transmissibility and severity of novel SARS-CoV-2 Variant of Concern 202012/01 in England Autorzy: Davies, Nicholas G.; Abbott, Sam; Barnard, Rosanna C.; Jarvis, Christopher I.; Kucharski, Adam J.; Munday, James D.; Pearson, Carl A. B.; Russell, Timothy W.; Tully, Damien C.; Washburne, Alex D.; Wenseleers, Tom; Gimma, Amy; Waites, William; Wong, Kerry L. M.; van Zandvoort, Kevin; Silverman, Justin D.; Diaz-Ordaz, Karla; Keogh, Ruth; Eggo, Rosalind M.; Funk, Sebastian; Jit, Mark; Atkins, Katheri Opublikowane w: Science, Issue 10, 2021, ISSN 0036-8075 Wydawca: American Association for the Advancement of Science DOI: 10.1101/2020.12.24.20248822 Within and between classroom transmission patterns of seasonal influenza among primary school students in Matsumoto city, Japan Autorzy: Akira Endo, Mitsuo Uchida ,Naoki Hayashi, Yang Liu, Katherine E. Atkins, Adam J. Kucharski, and Sebastian Funk Opublikowane w: Proceedings of the National Academy of Sciences, 2021, ISSN 0027-8424 Wydawca: National Academy of Sciences DOI: 10.1073/pnas.2112605118 Number of HIV-1 founder variants is determined by the recency of the source partner infection Autorzy: Ch. Julián Villabona-Arenas, Matthew Hall, Katrina A. Lythgoe, Stephen G. Gaffney, Roland R. Regoes, Stéphane Hué, Katherine E. Atkins Opublikowane w: Science, Issue 369/6499, 2020, Page(s) 103-108, ISSN 0036-8075 Wydawca: American Association for the Advancement of Science DOI: 10.1126/science.aba5443 Global, regional, and national estimates of the population at increased risk of severe COVID-19 due to underlying health conditions in 2020: a modelling study Autorzy: Andrew Clark, Mark Jit, Charlotte Warren-Gash, Bruce Guthrie, Harry H X Wang, Stewart W Mercer, Colin Sanderson, Martin McKee, Christopher Troeger, Kanyin L Ong, Francesco Checchi, Pablo Perel, Sarah Joseph, Hamish P Gibbs, Amitava Banerjee, Rosalind M Eggo, Emily S Nightingale, Kathleen O'Reilly, Thibaut Jombart, W John Edmunds, Alicia Rosello, Fiona Yueqian Sun, Katherine E Atkins, Nikos I Bosse Opublikowane w: The Lancet Global Health, Issue 8/8, 2020, Page(s) e1003-e1017, ISSN 2214-109X Wydawca: Elsevier BV DOI: 10.1016/s2214-109x(20)30264-3 Implication of backward contact tracing in the presence of overdispersed transmission in COVID-19 outbreaks Autorzy: 28. ENDO, A. ; CMMID COVID-19 Working Group,; LECLERC, QJ. ; KNIGHT, GM. ; MEDLEY, GF. ; ATKINS, KE. ; FUNK, S. ; KUCHARSKI, AJ Opublikowane w: Wellcome Open Research, 2021, ISSN 2398-502X Wydawca: Wellcome Trust DOI: 10.12688/wellcomeopenres.16344.3 Using phylogenetics to infer HIV-1 transmission direction between known transmission pairs Autorzy: Christian Julian Villabona-Arenas; Stéphane Hué; James A. C. Baxter; Matthew Hall; Katrina A. Lythgoe; John Bradley; Katherine E. Atkins Opublikowane w: Proceedings of the National Academy of Sciences, Issue 1, 2022, ISSN 0027-8424 Wydawca: National Academy of Sciences DOI: 10.1073/pnas.2210604119 Simulating respiratory disease transmission within and between classrooms to assess pandemic management strategies at schools Autorzy: Endo, Akira; Uchida, Mitsuo; Liu, Yang; Atkins, Katherine E.; Kucharski, Adam J.; Funk, Sebastian; Abbas, Kaja; van Zandvoort, Kevin; Bosse, Nikos I; Waterlow, Naomi R; Tully, Damien C; Meakin, Sophie R; Quaife, Matthew; Russell, Timothy W; Jit, Mark; Foss, Anna M; Rosello, Alicia; Quilty, Billy J; Prem, Kiesha; Knight, Gwenan M; Abbott, Sam; Klepac, Petra; Brady, Oliver; Pearson, Carl A B; Medley Opublikowane w: Proceedings of the National Academy of Sciences, Issue 1, 2022, ISSN 0027-8424 Wydawca: National Academy of Sciences DOI: 10.1073/pnas.2203019119 Implications of the school-household network structure on SARS-CoV-2 transmission under school reopening strategies in England Autorzy: James D. Munday, Katharine Sherratt, Sophie Meakin, Akira Endo, Carl A. B. Pearson, Joel Hellewell, Sam Abbott, Nikos I. Bosse, CMMID COVID-19 Working Group, Katherine E. Atkins, Jacco Wallinga, W. John Edmunds, Albert Jan van Hoek, Sebastian Funk Opublikowane w: Nature Communications, 2021, ISSN 2041-1723 Wydawca: Nature Publishing Group DOI: 10.1038/s41467-021-22213-0 Other (2) AtkinsGroup/TransmissionPairs: v1.0 Autorzy: Ch. Julian Villabona Arenas, Katherine Atkins, Stephen Gaffney Opublikowane w: 2020 Wydawca: Zenodo DOI: 10.5281/zenodo.3819343 HIV-1 founder variant multiplicity is determined by the infection stage of the source partner Autorzy: Villabona-Arenas CJ, Hall M, Lythgoe KA, Gaffney SG, Regoes RR, Hué S, Atkins KE. Opublikowane w: 2019 Wydawca: medRxiv DOI: 10.1101/19013524 Wyszukiwanie danych OpenAIRE... Podczas wyszukiwania danych OpenAIRE wystąpił błąd Brak wyników
