MIXed plastics biodegradation and UPcycling using microbial communities

Rezultaty

Related to task 82Final Data Management Plan

Related to task 8.2: Initial Data Management Plan

Online blog as platform for consistent public dissemination

Related to task 8.1: An online blog as platform for consistent public dissemination. After setting up the blog, frequent posts (English, minimum four per month) will report about the project’s progress and news from the global plastic crisis to set the consortium’s work in a comprehensive context. The blog will be linked to the social media channels of the consortium members to maximize the communication and impact (PGS).

Update SEVA collection

Related to task 7.7:Update SEVA collection with at least three new platforms for genome editing and site-specific sequence diversification of chromosomal segments (CSIC).

Publikacje

Synthetic Biology and Genome-Editing Tools for Improving PHA Metabolic Engineering

Autorzy: Xu Zhang, Yina Lin, Qiong Wu, Ying Wang, Guo-Qiang Chen
Opublikowane w: Trends in Biotechnology, Numer 38/7, 2020, Strona(/y) 689-700, ISSN 0167-7799
Wydawca: Elsevier BV
DOI: 10.1016/j.tibtech.2019.10.006

Biodegradation of polyester polyurethane by Cladosporium sp. P7: Evaluating its degradation capacity and metabolic pathways

Autorzy: Jiawei Liu, Qingyi Zeng, Huirui Lei, Kaiyuan Xin, Anming Xu, Ren Wei, Ding Li, Jie Zhou, Weiliang Dong, Min Jiang.
Opublikowane w: Journal of Hazardous Materials, 2023, ISSN 1873-3336
Wydawca: Elsevier
DOI: 10.1016/j.jhazmat.2023.130776

Enzymatic degradation of polyethylene terephthalate nanoplastics analyzed in real time by isothermal titration calorimetry

Autorzy: Kristina Vogel, Ren Wei, Lara Pfaff, Daniel Breite, Hassan Al-Fathi, Christian Ortmann, Irina Estrela-Lopis, Tom Venus, Agnes Schulze, Hauke Harms, Uwe T. Bornscheuer, Thomas Maskow
Opublikowane w: Science of The Total Environment, Numer 773, 2021, Strona(/y) 145111, ISSN 0048-9697
Wydawca: Elsevier BV
DOI: 10.1016/j.scitotenv.2021.145111

Anti-staphylococcal hydrogels based on bacterial cellulose and the antimicrobial biopolyester poly(3-hydroxy-acetylthioalkanoate-co-3-hydroxyalkanoate)

Autorzy: Virginia Rivero-Buceta, María Rosa Aguilar, Ana María Hernández-Arriaga, Francisco G. Blanco, Antonia Rojas, Marta Tortajada, Rosa Ana Ramírez-Jiménez, Blanca Vázquez-Lasa, Auxiliadora Prieto
Opublikowane w: International Journal of Biological Macromolecules, Numer 162, 2020, Strona(/y) 1869-1879, ISSN 0141-8130
Wydawca: Elsevier BV
DOI: 10.1016/j.ijbiomac.2020.07.289

Water potential governs the effector specificity of the transcriptional regulator XylR of Pseudomonas putida

Autorzy: Pavel Dvořák, Teca Calcagno Galvão, Katharina Pflüger-Grau, Alice M Banks, Víctor de Lorenzo, Jose I Jiménez
Opublikowane w: Environmental Microbiology, 2023, ISSN 1462-2920
Wydawca: Wiley
DOI: 10.1111/1462-2920.16342

Chemical and biological catalysis for plastics recycling and upcycling

Autorzy: Lucas D. Ellis, Nicholas A. Rorrer, Kevin P. Sullivan, Maike Otto, John E. McGeehan, Yuriy Román-Leshkov, Nick Wierckx, Gregg T. Beckham
Opublikowane w: Nature Catalysis, Numer 4/7, 2021, Strona(/y) 539-556, ISSN 2520-1158
Wydawca: Springer Nature
DOI: 10.1038/s41929-021-00648-4

MIXed plastics biodegradation and UPcycling using microbial communities: EU Horizon 2020 project MIX-UP started January 2020

Autorzy: Hendrik Ballerstedt, Till Tiso, Nick Wierckx, Ren Wei, Luc Averous, Uwe Bornscheuer, Kevin O’Connor, Tilman Floehr, Andreas Jupke, Jürgen Klankermayer, Luo Liu, Victor de Lorenzo, Tanja Narancic, Juan Nogales, Rémi Perrin, Eric Pollet, Auxiliadora Prieto, William Casey, Thomas Haarmann, Alexandru Sarbu, Ulrich Schwaneberg, Fengxue Xin, Weiliang Dong, Jiamin Xing, Guo-Qiang Chen, Tianwei Tan, M
Opublikowane w: Environmental Sciences Europe, Numer 33/1, 2021, Strona(/y) 99, ISSN 2190-4707
Wydawca: Springer Verlag
DOI: 10.1186/s12302-021-00536-5

High-Efficiency Multi-site Genomic Editing of Pseudomonas putida through Thermoinducible ssDNA Recombineering

Autorzy: Tomas Aparicio, Akos Nyerges, Esteban Martínez-García, Víctor de Lorenzo
Opublikowane w: iScience, Numer 23/3, 2020, Strona(/y) 100946, ISSN 2589-0042
Wydawca: Elsevier
DOI: 10.1016/j.isci.2020.100946

Structural Insights into (Tere)phthalate-Ester Hydrolysis by a Carboxylesterase and Its Role in Promoting PET Depolymerization

Autorzy: Gerlis von Haugwitz, Xu Han, Lara Pfaff, Qian Li, Hongli Wei, Jian Gao, Karen Methling, Yufei Ao, Yannik Brack, Jan Mican, Christian G. Feiler, Manfred S. Weiss, David Bednar, Gottfried J. Palm, Michael Lalk, Michael Lammers, Jiri Damborsky, Gert Weber, Weidong Liu, Uwe T. Bornscheuer, Ren Wei
Opublikowane w: ACS Catalysis, 2022, ISSN 2155-5435
Wydawca: American Chemical Society
DOI: 10.1021/acscatal.2c03772

Biosynthesis of functional polyhydroxyalkanoates by engineered Halomonas bluephagenesis

Autorzy: Lin-Ping Yu, Xu Yan, Xu Zhang, Xiang-Bin Chen, Qiong Wu, Xiao-Ran Jiang, Guo-Qiang Chen
Opublikowane w: Metabolic Engineering, Numer 59, 2020, Strona(/y) 119-130, ISSN 1096-7176
Wydawca: Academic Press
DOI: 10.1016/j.ymben.2020.02.005

Polyhydroxyalkanoates (PHA) toward cost competitiveness and functionality

Autorzy: Guo-Qiang Chen, Xin-Yu Chen, Fu-Qing Wu, Jin-Chun Chen
Opublikowane w: Advanced Industrial and Engineering Polymer Research, Numer 3/1, 2020, Strona(/y) 1-7, ISSN 2542-5048
Wydawca: Science Direct
DOI: 10.1016/j.aiepr.2019.11.001

A pseudo-homogeneous system for PET glycolysis using a colloidal catalyst of graphite carbon nitride in ethylene glycol

Autorzy: Zishuai Wang, Yaoqiang Wang, Shengnan Xu, Yu Jin, Zequn Tang, Gang Xiao, Haijia Su
Opublikowane w: Polymer Degradation and Stability, Numer 190, 2021, Strona(/y) 109638, ISSN 0141-3910
Wydawca: Elsevier BV
DOI: 10.1016/j.polymdegradstab.2021.109638

Molecular and Biochemical Differences of the Tandem and Cold-Adapted PET Hydrolases Ple628 and Ple629, Isolated From a Marine Microbial Consortium

Autorzy: Ingrid E. Meyer Cifuentes, Pan Wu, Yipei Zhao, Weidong Liu, Meina Neumann-Schaal, Lara Pfaff, Justyna Barys, Zhishuai Li, Jian Gao, Xu Han, Uwe T. Bornscheuer, Ren Wei, Basak Öztürk
Opublikowane w: Frontiers in Bioengineering and Biotechnology, 2022, ISSN 2296-4185
Wydawca: Frontiers Media S.A
DOI: 10.3389/fbioe.2022.930140

Engineering Halomonas bluephagenesis for L-Threonine production

Autorzy: Hetong Du, Yiqing Zhao, Fuqing Wu, Peifei Ouyang, Jinchun Chen, Xiaoran Jiang, Jianwen Ye, Guo-Qiang Chen
Opublikowane w: Metabolic Engineering, Numer 60, 2020, Strona(/y) 119-127, ISSN 1096-7176
Wydawca: Academic Press
DOI: 10.1016/j.ymben.2020.04.004

The molecular basis and enzyme engineering strategies for improvement of coupling efficiency in cytochrome P450s

Autorzy: Shuaiqi Meng, Yu Ji, LeiLei Zhu, Gaurao V. Dhoke, Mehdi D. Davari, Ulrich Schwaneberg
Opublikowane w: Biotechnology Advances, 2022, ISSN 0734-9750
Wydawca: Elsevier BV
DOI: 10.1016/j.biotechadv.2022.108051

Uncoupling Foam Fractionation and Foam Adsorption for Enhanced Biosurfactant Synthesis and Recovery.

Autorzy: Christian C. Blesken; Tessa Strümpfler; Till Tiso; Lars M. Blank
Opublikowane w: Microorganisms, Numer 2, 2020, ISSN 2078-2489
Wydawca: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.18154/rwth-2021-00396

For the sake of the Bioeconomy: define what a Synthetic Biology Chassis is!

Autorzy: Víctor de Lorenzo, Natalio Krasnogor, Markus Schmidt
Opublikowane w: New Biotechnology, Numer 60, 2021, Strona(/y) 44-51, ISSN 1871-6784
Wydawca: Elsevier BV
DOI: 10.1016/j.nbt.2020.08.004

Synthetic Control of Metabolic States in Pseudomonas putida by Tuning Polyhydroxyalkanoate Cycle

Autorzy: Maria-Tsampika Manoli, Juan Nogales, Auxiliadora Prieto
Opublikowane w: mBio, Numer January/February 2022 Volume 13 Numer 11, 2022, ISSN 2150-7511
Wydawca: American Society for Microbiology
DOI: 10.1128/mbio.01794-21

Sustainable cycloaliphatic polyurethanes from synthesis to applications

Autorzy: Agathe Mouren, Luc Avérous
Opublikowane w: Chem. Soc. Rev., Numer Vol. 52, 2023, Strona(/y) 277-317, ISSN 1460-4744
Wydawca: RSC
DOI: 10.1039/d2cs00509c

CRISPR/Cas9-enhanced targetron insertion for the delivery of heterologous sequences into the genome of Gram-negative bacteria

Autorzy: Elena Velázquez, Yamal Al-Ramahi, Víctor de Lorenzo
Opublikowane w: Current Protocols, Numer 2(9), 2022, Strona(/y) e532, ISSN 2691-1299
Wydawca: Wiley on line Library
DOI: 10.1002/cpz1.532

ArsH protects Pseudomonas putida from oxidative damage caused by exposure to arsenic

Autorzy: A. David Páez‐Espino, Pablo I. Nikel, Max Chavarría, Víctor Lorenzo
Opublikowane w: Environmental Microbiology, Numer 22/6, 2020, Strona(/y) 2230-2242, ISSN 1462-2912
Wydawca: Blackwell Publishing Inc.
DOI: 10.1111/1462-2920.14991

Toward merging bottom–up and top–down model-based designing of synthetic microbial communities

Autorzy: David San León, Juan Nogales
Opublikowane w: Current Opinion in Microbiology, Numer Volume 69, October 2022, 102169, 2022, Strona(/y) 102169, ISSN 1369-5274
Wydawca: Elsevier BV
DOI: 10.1016/j.mib.2022.102169

Towards bio-upcycling of polyethylene terephthalate

Autorzy: Till Tiso, Tanja Narancic, Ren Wei, Eric Pollet, Niall Beagan, Katja Schröder, Annett Honak, Mengying Jiang, Shane T. Kenny, Nick Wierckx, Rémi Perrin, Luc Avérous, Wolfgang Zimmermann, Kevin O'Connor, Lars M. Blank
Opublikowane w: Metabolic Engineering, Numer 66, 2021, Strona(/y) 167-178, ISSN 1096-7176
Wydawca: Academic Press
DOI: 10.1016/j.ymben.2021.03.011

An updated structural model of the A domain of the Pseudomonas putida XylR regulator poses an atypical interplay with aromatic effectors

Autorzy: Pavel Dvořák, Carlos Alvarez‐Carreño, Sergio Ciordia, Alberto Paradela, Víctor Lorenzo
Opublikowane w: Environmental Microbiology, Numer 23/8, 2021, Strona(/y) 4418-4433, ISSN 1462-2912
Wydawca: Blackwell Publishing Inc.
DOI: 10.1111/1462-2920.15628

Tailor‐Made Polyhydroxyalkanoates by Reconstructing Pseudomonas Entomophila

Autorzy: Mengyi Li, Yueyuan Ma, Xu Zhang, Lizhan Zhang, Xinyu Chen, Jian‐Wen Ye, Guo‐Qiang Chen
Opublikowane w: Advanced Materials, 2021, Strona(/y) 2102766, ISSN 0935-9648
Wydawca: United Nations Industrial Developement Organization
DOI: 10.1002/adma.202102766

Mixed plastics biodegradation and UPcycling using microbial communities: the NSFC-EU 2019 project MIX-UP to help achieve “carbon neutrality”

Autorzy: Jie Zhou, Haijia Su, Qiong Wu, Jianmin Xing, Weiliang Dong and Min Jiang
Opublikowane w: Chinese Journal of Biotechnology, 2021, ISSN 1000-3061
Wydawca: Kexue Chubaneshe/Science Press
DOI: 10.13345/j.cjb.210398

Reconfiguration of metabolic fluxes in Pseudomonas putida as a response to sub-lethal oxidative stress

Autorzy: Pablo I. Nikel, Tobias Fuhrer, Max Chavarría, Alberto Sánchez-Pascuala, Uwe Sauer, Víctor de Lorenzo
Opublikowane w: The ISME Journal, Numer 15/6, 2021, Strona(/y) 1751-1766, ISSN 1751-7362
Wydawca: Nature Publishing Group
DOI: 10.1038/s41396-020-00884-9

Novel Magnetic Carbon Supported Molybdenum Disulfide Catalyst and Its Application in Residue Upgrading

Autorzy: Xiangyang Zhu, Dong Qiao, Liangrong Yang, Qinling Bi, Huifang Xing, Shan Ni, Menglei Yuan, Huizhou Liu, Luhai Wang, An Ma
Opublikowane w: Green Energy & Environment, 2020, ISSN 2468-0257
Wydawca: ELSEVIER ScienceDirect
DOI: 10.1016/j.gee.2020.06.025

From Residues to Added-Value Bacterial Biopolymers as Nanomaterials for Biomedical Applications

Autorzy: Francisco G. Blanco, Natalia Hernández, Virginia Rivero-Buceta, Beatriz Maestro, Jesús M. Sanz, Aránzazu Mato, Ana M. Hernández-Arriaga, M. Auxiliadora Prieto
Opublikowane w: Nanomaterials, Numer 11/6, 2021, Strona(/y) 1492, ISSN 2079-4991
Wydawca: MDPI
DOI: 10.3390/nano11061492

Editorial: Microbial Degradation of Plastics

Autorzy: Ren Wei, Nick Wierckx
Opublikowane w: Frontiers in Microbiology, Numer 12, 2021, ISSN 1664-302X
Wydawca: Frontiers Media
DOI: 10.3389/fmicb.2021.635621

Synthesis of Modified Poly(vinyl Alcohol)s and Their Degradation Using an Enzymatic Cascade

Autorzy: Gerlis von Haugwitz, Kian Donnelly, Mara Di Filippo, Daniel Breite, Max Phippard, Agnes Schulze, Ren Wei, Marcus Baumann, Uwe Bornscheuer
Opublikowane w: Angew. Chem. Int. Ed., 2023, ISSN 1521-3773
Wydawca: Wiley
DOI: 10.1002/anie.202216962

Concomitant prediction of environmental fate and toxicity of chemical compounds

Autorzy: Juan Antonio Garcia-Martin, Max Chavarría, Victor de Lorenzo, Florencio Pazos
Opublikowane w: Biology Methods and Protocols, Numer 5/1, 2020, ISSN 2396-8923
Wydawca: Oxford University Press
DOI: 10.1093/biomethods/bpaa025

Process analysis of microplastic degradation using activated PMS and Fenton reagents

Autorzy: Bin Liu, Qixuan Jiang, Zenghui Qiu, Luo Liu, Ren Wei, Xin Zhang, Haijun Xu
Opublikowane w: Chemosphere, 2022, ISSN 0045-6535
Wydawca: Pergamon Press Ltd.
DOI: 10.1016/j.chemosphere.2022.134220

Surface Display of Designer Protein Scaffolds on Genome-Reduced Strains of Pseudomonas putida

Autorzy: Pavel Dvořák, Edward A. Bayer, Víctor de Lorenzo
Opublikowane w: ACS Synthetic Biology, Numer 9/10, 2020, Strona(/y) 2749-2764, ISSN 2161-5063
Wydawca: American Chemical Society
DOI: 10.1021/acssynbio.0c00276

Innovation versus novelty in microbial systems

Autorzy: de Lorenzo, Víctor
Opublikowane w: Environmental Microbioly, Numer 25(1), 2023, Strona(/y) 167-170, ISSN 1462-2920
Wydawca: Wiley
DOI: 10.1111/1462-2920.16278

ssDNA recombineering boosts in vivo evolution of nanobodies displayed on bacterial surfaces.

Autorzy: Yamal Al-ramahi, Akos Nyerges, Yago Margolles, Lidia Cerdán, Gyorgyi Ferenc, Csaba Pál, Luis Ángel Fernández, Víctor de Lorenzo
Opublikowane w: Communications Biology, Numer volume 4, Article number: 1169, 2021, ISSN 2399-3642
Wydawca: Nature Research
DOI: 10.1038/s42003-021-02702-0

Fabrication of hypercrosslinked hydroxyl-rich solid phase extractants for cesium separation from the salt lake brine

Autorzy: Zihao Xu, Meng Rong, Qiyu Meng, Haoyu Yao, Shan Ni, Li Wang, Huifang Xing, Hongnan Qu, Liangrong Yang, Huizhou Liu
Opublikowane w: Chemical Engineering Journal, Numer 400, 2020, Strona(/y) 125991, ISSN 1385-8947
Wydawca: Elsevier BV
DOI: 10.1016/j.cej.2020.125991

Possibilities and limitations of biotechnological plastic degradation and recycling

Autorzy: Ren Wei, Till Tiso, Jürgen Bertling, Kevin O’Connor, Lars M. Blank, Uwe T. Bornscheuer
Opublikowane w: Nature Catalysis, Numer Monthly journal, 2020, ISSN 2520-1158
Wydawca: Springer Nature
DOI: 10.1038/s41929-020-00521-w

A Standardized Inverter Package Borne by Broad Host Range Plasmids for Genetic Circuit Design in Gram-Negative Bacteria

Autorzy: Huseyin Tas, Ángel Goñi-Moreno, Víctor de Lorenzo
Opublikowane w: ACS Synthetic Biology, Numer 10/1, 2021, Strona(/y) 213-217, ISSN 2161-5063
Wydawca: American Chemical Society
DOI: 10.1021/acssynbio.0c00529

A Combined Bio-Chemical Synthesis Route for 1-Octene Sheds Light on Rhamnolipid Structure

Autorzy: Till Tiso, Daniel F. Sauer, Klaus Beckerle, Christian C. Blesken, Jun Okuda, Lars M. Blank
Opublikowane w: Catalysts, Numer 10/8, 2020, Strona(/y) 874, ISSN 2073-4344
Wydawca: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/catal10080874

Efficient recovery of bio-based 1,2,4-butanetriol by using boronic acid anionic reactive extraction

Autorzy: Qiyu Meng, Jiemiao Yu, Liangrong Yang, Yanqing Li, Mo Xian, Huizhou Liu
Opublikowane w: Separation and Purification Technology, Numer 255, 2021, Strona(/y) 117728, ISSN 1383-5866
Wydawca: Pergamon Press Ltd.
DOI: 10.1016/j.seppur.2020.117728

Fusion of Chitin-Binding Domain From Chitinolyticbacter meiyuanensis SYBC-H1 to the Leaf-Branch Compost Cutinase for Enhanced PET Hydrolysis

Autorzy: Rui Xue, Yinping Chen, Huan Rong, Ren Wei, Zhongli Cui, Jie Zhou, Weiliang Dong, Min Jiang
Opublikowane w: Frontiers in Bioengineering and Biotechnology, 2021, ISSN 2296-4185
Wydawca: Frontiers Media S.A.
DOI: 10.3389/fbioe.2021.762854

Standardization of inducer-activated broad host range expression modules: Debugging and refactoring an alkane-responsive AlkS/PalkB device.

Autorzy: Alejandro Arce-Rodríguez, Ilaria Benedetti, José Manuel Borrero-de Acuña, Rafael Silva-Rocha, Víctor de Lorenzo
Opublikowane w: Synthetic Biology, Numer Volume 6, Numer 1, 2021, Strona(/y) 1–11, ISSN 2397-7000
Wydawca: Oxford University Press
DOI: 10.1093/synbio/ysab030

Enhanced resistance of Trichoderma harzianum LZDX-32-08 to hygromycin B induced by sea salt

Autorzy: Xijia Yu, Huiling Wei, Xianrui Liu, Dong Liu, Aili Fan, Haijia Su
Opublikowane w: Biotechnology Letters, Numer 43/1, 2021, Strona(/y) 213-222, ISSN 0141-5492
Wydawca: Kluwer Academic Publishers
DOI: 10.1007/s10529-020-02994-y

Hyphenation of supercritical fluid chromatography with different detection methods for identification and quantification of liamocin biosurfactants

Autorzy: Karen Scholz, Anna Lipphardt, Carina M. Wienken, Till Tiso, Heiko Hayen
Opublikowane w: Journal of Chromatography A, Numer 1631, 2020, Strona(/y) 461584, ISSN 0021-9673
Wydawca: Elsevier BV
DOI: 10.1016/j.chroma.2020.461584

Hypermutation of specific genomic loci of Pseudomonas putida for continuous evolution of target genes

Autorzy: Elena Velázquez, Beatriz Álvarez, Luis Ángel Fernández, Víctor de Lorenzo
Opublikowane w: Microbial Biotechnology, Numer 15(9), 2022, Strona(/y) 2309-2323, ISSN 1751-7915
Wydawca: Wiley Open Access
DOI: 10.1111/1751-7915.14098

Gaining control of bacterial cellulose colonization by polyhydroxyalkanoate-producing microorganisms to develop bioplasticized ultrathin films

Autorzy: Campano, Cristina; Rivero-Buceta, Virginia; Fabra, María José; Prieto, M Auxiliadora
Opublikowane w: International Journal of Biological Macromolecules, Numer Volume 223, Part A, 2022, Strona(/y) 1495-1505, ISSN 1879-0003
Wydawca: Elsevier B.V.
DOI: 10.1016/j.ijbiomac.2022.11.120

Quantitative assessment of morphological traits of planktonic bacterial aggregates

Autorzy: David R. Espeso, Esteban Martínez-García, Víctor de Lorenzo
Opublikowane w: Water Research, Numer 188, 2021, Strona(/y) 116468, ISSN 0043-1354
Wydawca: Elsevier BV
DOI: 10.1016/j.watres.2020.116468

Low CyaA expression and anti‐cooperative binding of cAMP to CRP frames the scope of the cognate regulon of Pseudomonas putida

Autorzy: Alejandro Arce‐Rodríguez, Pablo I. Nikel, Belén Calles, Max Chavarría, Raúl Platero, Tino Krell, Victor Lorenzo
Opublikowane w: Environmental Microbiology, Numer 23/3, 2021, Strona(/y) 1732-1749, ISSN 1462-2912
Wydawca: Blackwell Publishing Inc.
DOI: 10.1111/1462-2920.15422

Rapid colonization and biodegradation of untreated commercial polyethylene wrap by a new strain of Bacillus velezensis C5

Autorzy: Xianrui Liu, Yiming Zhang, Qiufeng Sun, Zihan Liu, Yilin Zhao, Aili Fan, Haijia Su
Opublikowane w: Journal of Environmental Management, 2021, ISSN 0301-4797
Wydawca: Academic Press
DOI: 10.1016/j.jenvman.2021.113848

Genome analysis of the metabolically versatile Pseudomonas umsongensis GO16: the genetic basis for PET monomer upcycling into polyhydroxyalkanoates

Autorzy: Tanja Narancic, Manuel Salvador, Graham M. Hughes, Niall Beagan, Umar Abdulmutalib, Shane T. Kenny, Huihai Wu, Marta Saccomanno, Jounghyun Um, Kevin E. O'Connor, José I. Jiménez
Opublikowane w: Microbial Biotechnology, 2021, ISSN 1751-7915
Wydawca: WILEY
DOI: 10.1111/1751-7915.13712

Metabolic modelling approaches for describing and engineering microbial communities

Autorzy: Beatriz García-Jiménez, Jesús Torres-Bacete, Juan Nogales
Opublikowane w: Computational and Structural Biotechnology Journal, Numer 19, 2021, Strona(/y) 226-246, ISSN 2001-0370
Wydawca: Elsevier B.V.
DOI: 10.1016/j.csbj.2020.12.003

A SsrA/NIa-based Strategy for Post-Translational Regulation of Protein Levels in Gram-negative Bacteria

Autorzy: Gonzalo Durante-Rodríguez, Belén Calles, Víctor Lorenzo, Pablo Nikel
Opublikowane w: BIO-PROTOCOL, Numer 10/14, 2020, ISSN 2331-8325
Wydawca: Bio-101
DOI: 10.21769/bioprotoc.3688

The faulty SOS response of Pseudomonas putida KT2440 stems from an inefficient RecA‐LexA interplay

Autorzy: Özlem Akkaya, Tomás Aparicio, Danilo Pérez‐Pantoja, Víctor Lorenzo
Opublikowane w: Environmental Microbiology, Numer 23/3, 2021, Strona(/y) 1608-1619, ISSN 1462-2912
Wydawca: Blackwell Publishing Inc.
DOI: 10.1111/1462-2920.15384

Biodegradation of polyether-polyurethane foam in yellow mealworms (Tenebrio molitor) and effects on the gut microbiome

Autorzy: Jiawei Liu, Jingyuan Liu, Bin Xu, Anming Xu, Shixiang Cao, Ren Wei, Jie Zhou, Min Jiang, Weiliang Dong
Opublikowane w: Chemosphere, 2022, ISSN 0045-6535
Wydawca: Pergamon Press Ltd.
DOI: 10.1016/j.chemosphere.2022.135263

Rational flux-tuning of Halomonas bluephagenesis for co-production of bioplastic PHB and ectoine

Autorzy: Hong Ma, Yiqing Zhao, Wuzhe Huang, Lizhan Zhang, Fuqing Wu, Jianwen Ye, Guo-Qiang Chen
Opublikowane w: Nature Communications, Numer 11/1, 2020, ISSN 2041-1723
Wydawca: Nature Publishing Group
DOI: 10.1038/s41467-020-17223-3

Applications of phage-derived RNA-based technologies in synthetic biology

Autorzy: Wenhui Zhang, Qiong Wu
Opublikowane w: Synthetic and Systems Biotechnology, Numer 5/4, 2020, Strona(/y) 343-360, ISSN 2405-805X
Wydawca: Science Direct
DOI: 10.1016/j.synbio.2020.09.003

Naked Bacterium: Emerging Properties of a Surfome-Streamlined Pseudomonas putida Strain

Autorzy: Esteban Martínez-García, Sofía Fraile, David Rodríguez Espeso, Davide Vecchietti, Giovanni Bertoni, Víctor de Lorenzo
Opublikowane w: ACS Synthetic Biology, Numer 9/9, 2020, Strona(/y) 2477-2492, ISSN 2161-5063
Wydawca: American Chemical Society
DOI: 10.1021/acssynbio.0c00272

The metabolic potential of plastics as biotechnological carbon sources – Review and targets for the future

Autorzy: Till Tiso, Benedikt Winter, RenWei, Johann Hee, Jan de Witt, NickWierckx, Peter Quicker, Uwe T. Bornscheuer, André Bardow, Juan Nogales, Lars M.Blank
Opublikowane w: Metabolic Engineering, 2021, ISSN 1096-7176
Wydawca: Academic Press
DOI: 10.1016/j.ymben.2021.12.006

Environmental Performance of Pseudomonas putida with a Uracylated Genome

Autorzy: Elena Algar, Yamal Al‐Ramahi, Víctor Lorenzo, Esteban Martínez‐García
Opublikowane w: ChemBioChem, Numer 21/22, 2020, Strona(/y) 3255-3265, ISSN 1439-4227
Wydawca: John Wiley & Sons Ltd.
DOI: 10.1002/cbic.202000330

Quantum Mechanical Investigation of the Oxidative Cleavage of the C–C Backbone Bonds in Polyethylene Model Molecules

Autorzy: Qixuan Jiang, Zhongyu Li, Ziheng Cui, Ren Wei, Kaili Nie, Haijun Xu, Luo Liu
Opublikowane w: Polymers, Numer 13/16, 2021, Strona(/y) 2730, ISSN 2073-4360
Wydawca: MDPI
DOI: 10.3390/polym13162730

Insight into formation and biological characteristics of Aspergillus tubingensis-based aerobic granular sludge (AT-AGS) in wastewater treatment

Autorzy: Yingyun Chen, Jiye Ge, Shaojie Wang, Haijia Su
Opublikowane w: Science of The Total Environment, Numer 739, 2020, Strona(/y) 140128, ISSN 0048-9697
Wydawca: Elsevier BV
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Engineering Tropism of Pseudomonas putida toward Target Surfaces through Ectopic Display of Recombinant Nanobodies

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Hyperproduction of PHA copolymers containing high fractions of 4‐hydroxybutyrate (4HB) by outer membrane‐defected <i>Halomonas bluephagenesis</i> grown in bioreactors

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Hyperproduction of 3-hydroxypropionate by Halomonas bluephagenesis

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Biotechnological approach for polyurethane recycling: Separation of diamines from by-products via liquid-liquid extractio

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