Rezultaty Other (8) Training event 2 Successful implementation of training event month 12: Communication and Presentation 1 (UW) PhD theses submission Ensure all PhD theses submitted. Publications for each WP (WP3-WP5) Submission of at least 2 peer review research papers per ESR. Lead partner: WP lead Training events 3 Successful implementation of training events - month 18: - Abiotic Influences on Viticulture (UCPH) - Grape Harvesting and Biological Monitoring during Fermentation (ChrHa) - Science of Wine and Port Production (AESBUC) - Origins of Viticulture (INRA) Training events 1 Successful implementation of training events - month 7: - Kickoff conference: 21st Century Challenges to Viticulture (AU). - 21st Century Approaches to Viticiulture and Understanding Wine Quality (ChrHa) Training events 4 Successful implementation of training events - month 24 - Midterm conference: Meeting Viticulture challenges through Novel Technological Developments (AU) - Communciation and Presentation 2 (UCPH) - Research Management, Career Planning, Grant Writing (UCPH) - Entrepreneurschip (ChrHa) - Genomics - from Microbe to Vine (DTU) Training event 5 Successful implementation of training event - month 30 - Applied Snesory Analysis (DLR-RLP) - Aroma Analytics (UNIZAR) Training event 6 Successful implementation of training events - month 36. - Bio-informatics and modelling (VU) - Symbiosis - Biology and Methodology (INRIA) Documents, reports (1) Training event 7 Successful implementation of training event - month 42: Final Conference MICROWINE 2020 - State of the Art Solutions for Viticulture Publikacje Peer reviewed articles (23) Seasonal epiphytic microbial dynamics on grapevine leaves under biocontrol and copper fungicide treatments Autorzy: Alex Gobbi; Ifigeneia Kyrkou; Elisa Filippi; Lea Ellegaard-Jensen; Lars Hestbjerg Hansen; Lars Hestbjerg Hansen Opublikowane w: Scientific Reports, Issue 10, 2020, ISSN 2045-2322 Wydawca: Nature Publishing Group DOI: 10.1038/s41598-019-56741-z Comparative performance of the BGISEQ-500 vs Illumina HiSeq2500 sequencing platforms for palaeogenomic sequencing Autorzy: Sarah Siu Tze Mak, Shyam Gopalakrishnan, Christian Carøe, Chunyu Geng, Shanlin Liu, Mikkel-Holger S Sinding, Lukas F K Kuderna, Wenwei Zhang, Shujin Fu, Filipe G Vieira, Mietje Germonpré, Hervé Bocherens, Sergey Fedorov, Bent Petersen, Thomas Sicheritz-Pontén, Tomas Marques-Bonet, Guojie Zhang, Hui Jiang, M Thomas P Gilbert Opublikowane w: GigaScience, Issue 6/8, 2017, Page(s) 1-13, ISSN 2047-217X Wydawca: Oxford Academic DOI: 10.1093/gigascience/gix049 Pierce's Disease of Grapevines: A Review of Control Strategies and an Outline of an Epidemiological Model Autorzy: Ifigeneia Kyrkou, Taneli Pusa, Lea Ellegaard-Jensen, Marie-France Sagot, Lars Hestbjerg Hansen Opublikowane w: Frontiers in Microbiology, Issue 9, 2018, ISSN 1664-302X Wydawca: Frontiers Media DOI: 10.3389/fmicb.2018.02141 Multi-omics and potential applications in wine production Autorzy: Kimmo Sirén, Sarah Siu Tze Mak, Ulrich Fischer, Lars Hestbjerg Hansen, M Thomas P Gilbert Opublikowane w: Current Opinion in Biotechnology, Issue 56, 2019, Page(s) 172-178, ISSN 0958-1669 Wydawca: Elsevier BV DOI: 10.1016/j.copbio.2018.11.014 Assessing the impact of plant genetic diversity in shaping the microbial community structure of Vitis vinifera phyllosphere in the Mediterranean Autorzy: Prashant Singh, Alex Gobbi, Sylvain Santoni, Lars H Hansen, Patrice This, Jean-Pierre Péros Opublikowane w: Frontiers in Life Science, Issue 11/1, 2018, Page(s) 35-46, ISSN 2155-3769 Wydawca: Taylor and Francis Inc. DOI: 10.1080/21553769.2018.1552628 Genotype-Environment Interaction Shapes the Microbial Assemblage in Grapevine’s Phyllosphere and Carposphere: An NGS Approach Autorzy: Prashant Singh, Sylvain Santoni, Patrice This, Jean-Pierre Péros Opublikowane w: Microorganisms, Issue 6/4, 2018, Page(s) 96, ISSN 2076-2607 Wydawca: mdpi DOI: 10.3390/microorganisms6040096 Automated supervised learning pipeline for non-targeted GC-MS data analysis Autorzy: Kimmo Sirén, Ulrich Fischer, Jochen Vestner Opublikowane w: Analytica Chimica Acta: X, Issue 1, 2019, Page(s) 100005, ISSN 2590-1346 Wydawca: Elsevier B.V. DOI: 10.1016/j.acax.2019.100005 Distribution of Oenococcus oeni populations in natural habitats Autorzy: Lorentzen, Marc Lucas, Patrick Opublikowane w: Applied Microbiolology and Biotechnology, Issue 103, 2019, Page(s) 0175-7598/2937-2945, ISSN 1432-0614 Wydawca: Springer Berlin Heidelberg DOI: 10.1007/s00253-019-09689-z Metabolic Games Autorzy: Taneli Pusa, Martin Wannagat, Marie-France Sagot Opublikowane w: Frontiers in Applied Mathematics and Statistics, Issue 5, 2019, ISSN 2297-4687 Wydawca: Front. Appl. Math. Stat. DOI: 10.3389/fams.2019.00018 Taxonomic and Functional Characterization of the Microbial Community During Spontaneous in vitro Fermentation of Riesling Must Autorzy: Kimmo Sirén, Sarah Siu Tze Mak, Chrats Melkonian, Christian Carøe, Jan Hendrik Swiegers, Douwe Molenaar, Ulrich Fischer, M. Thomas P. Gilbert Opublikowane w: Frontiers in Microbiology, Issue 10, 2019, ISSN 1664-302X Wydawca: Frontiers Media DOI: 10.3389/fmicb.2019.00697 Quantitative and qualitative evaluation of the impact of the G2 enhancer, bead sizes and lysing tubes on the bacterial community composition during DNA extraction from recalcitrant soil core samples based on community sequencing and qPCR Autorzy: Alex Gobbi, Rui G. Santini, Elisa Filippi, Lea Ellegaard-Jensen, Carsten S. Jacobsen, Lars H. Hansen Opublikowane w: PLOS ONE, Issue 14/4, 2019, Page(s) e0200979, ISSN 1932-6203 Wydawca: Public Library of Science DOI: 10.1371/journal.pone.0200979 Expanding the biodiversity of Oenococcus oeni through comparative genomics of apple cider and kombucha strains Autorzy: Marc P. Lorentzen, Hugo Campbell-Sills, Tue S. Jorgensen, Tue K. Nielsen, Monika Coton, Emmanuel Coton, Lars Hansen, Patrick M. Lucas Opublikowane w: BMC Genomics, Issue 20/1, 2019, ISSN 1471-2164 Wydawca: BioMed Central DOI: 10.1186/s12864-019-5692-3 Changes in the Composition of the Lactic Acid Bacteria Behavior and the Diversity of Oenococcus oeni Isolated from Red Wines Supplemented with Selected Grape Phenolic Compounds Autorzy: Ingrid Collombel, Francisco Campos, Tim Hogg Opublikowane w: Fermentation, Issue 5/1, 2019, Page(s) 1, ISSN 2311-5637 Wydawca: MDPI DOI: 10.3390/fermentation5010001 Modulating Fermentative, Varietal and Aging Aromas of Wine Using non-Saccharomyces Yeasts in a Sequential Inoculation Approach Autorzy: Inès Oliveira; Vicente Ferreira Opublikowane w: Microorganisms, Issue 12 per year, 2019, Page(s) 1-23, ISSN 2076-2607 Wydawca: MDPI AG DOI: 10.3390/microorganisms7060164 Epicoccum layuense a potential biological control agent of esca-associated fungi in grapevine Autorzy: Giovanni Del Frari, Ana Cabral, Teresa Nascimento, Ricardo Boavida Ferreira, Helena Oliveira Opublikowane w: PLOS ONE, Issue 14/3, 2019, Page(s) e0213273, ISSN 1932-6203 Wydawca: Public Library of Science DOI: 10.1371/journal.pone.0213273 Finding Functional Differences Between Species in a Microbial Community: Case Studies in Wine Fermentation and Kefir Culture Autorzy: Chrats Melkonian, Willi Gottstein, Sonja Blasche, Yongkyu Kim, Martin Abel-Kistrup, Hentie Swiegers, Sofie Saerens, Nathalia Edwards, Kiran R. Patil, Bas Teusink, Douwe Molenaar Opublikowane w: Frontiers in Microbiology, Issue 10, 2019, ISSN 1664-302X Wydawca: Frontiers Media DOI: 10.3389/fmicb.2019.01347 Endotherapy of infected grapevine cuttings for the control of Phaeomoniella chlamydospora and Phaeoacremonium minimum Autorzy: GioVAnni DEL FRARI, João COSTA, HeLenA OLIVEIRA and RiCARdo BOAVIDA FERREIRA Opublikowane w: Phytopathologia Mediterranea, 2018, ISSN 1593-2095 Wydawca: Firenze University Press DOI: 10.14601/phytopathol_mediterr-23515 Characterization of the Wood Mycobiome of Vitis vinifera in a Vineyard Affected by Esca. Spatial Distribution of Fungal Communities and Their Putative Relation With Leaf Symptoms Autorzy: Giovanni Del Frari, Alex Gobbi, Marie Rønne Aggerbeck, Helena Oliveira, Lars Hestbjerg Hansen, Ricardo Boavida Ferreira Opublikowane w: Frontiers in Plant Science, Issue 10, 2019, ISSN 1664-462X Wydawca: Frontiers Media S. A. DOI: 10.3389/fpls.2019.00910 Expanding the Diversity of Myoviridae Phages Infecting Lactobacillus plantarum—A Novel Lineage of Lactobacillus Phages Comprising Five New Members Autorzy: Ifigeneia Kyrkou, Alexander Byth Carstens, Lea Ellegaard-Jensen, Witold Kot, Athanasios Zervas, Amaru Miranda Djurhuus, Horst Neve, Martin Hansen, Lars Hestbjerg Hansen Opublikowane w: Viruses, Issue 11/7, 2019, Page(s) 611, ISSN 1999-4915 Wydawca: Multidisciplinary Digital Publishing Institute (MDPI) DOI: 10.3390/v11070611 MOOMIN - Mathematical explOration of 'Omics data on a MetabolIc Network Autorzy: Pusa, Taneli; Ferrarini, Mariana Galvao; Andrade, Ricardo; Mary, Arnaud; Marchetti-Spaccamela, Alberto; Stougie, Leen; Sagot, Marie-France Opublikowane w: Bioinformatics, 2019, ISSN 1367-4803 Wydawca: Oxford University Press DOI: 10.1093/bioinformatics/btz584 New Insights Into Cinnamoyl Esterase Activity of Oenococcus oeni. Autorzy: Ingrid Collombel; Chrats Melkonian; Douwe Molenaar; Francisco M. Campos; Tim Hogg; Tim Hogg Opublikowane w: Frontiers in Microbiology, Issue 10, 2019, ISSN 1664-302X Wydawca: Frontiers Media DOI: 10.3389/fmicb.2019.02597 "Isolation and characterisation of novel phages infecting Lactobacillus plantarum and proposal of a new genus, \""Silenusvirus\""." Autorzy: Ifigeneia Kyrkou; Alexander Byth Carstens; Alexander Byth Carstens; Lea Ellegaard-Jensen; Witold Kot; Witold Kot; Athanasios Zervas; Amaru Miranda Djurhuus; Amaru Miranda Djurhuus; Horst Neve; Charles M. A. P. Franz; Martin Hansen; Lars Hestbjerg Hansen; Lars Hestbjerg Hansen Opublikowane w: Scientific Reports, Issue 10, 2020, ISSN 2045-2322 Wydawca: Nature Publishing Group DOI: 10.1101/728261 Understanding the phyllosphere microbiome assemblage in grape species (<em>Vitaceae</em>) with amplicon sequence data structures Autorzy: Singh, Prashant; Santoni, Sylvain; Weber, Audrey; This, Patrice; Peros, Jean-Pierre Opublikowane w: Scientific Reports, 2019, ISSN 2045-2322 Wydawca: Nature Publishing Group DOI: 10.1038/s41598-019-50839-0 Thesis dissertations (14) Control of Bacteria for Sustainable Viticulture and Vinification Practices Autorzy: Ifigeneia Kyrkou Opublikowane w: PhD thesis, 2018 Wydawca: Aarhus University Microbial Assemblage in Grapevine's Phyllosphere: Who is the driver ? Autorzy: Prashant Singh Opublikowane w: 2018 Wydawca: Montpellier Supagro Vineyard soils evaluation. Combining elemental analysis via X-ray fluorescence core scanner and microbial DNA sequencing to assess soil vertical stratification Autorzy: Rui Santini Opublikowane w: PhD Thesis, 2018 Wydawca: University of Copenhagen Riesling, ferments, microbes −The development and application of NGS tools in the context of winemaking Autorzy: Sarah ST Mak Opublikowane w: PhD Thesis, 2018 Wydawca: University of Copenhagen Multi-omics Methods to unravel Microbial Diversity in Fermentation of Riesling Wines Autorzy: Kimmo Sirén Opublikowane w: PhD Thesis, 2019 Wydawca: Technical University of Kaiserlautern Mathematical modelling of the impacts of environment using metabolic networks and game theory Autorzy: Henri Taneli Pusa Opublikowane w: PhD Thesis, 2019 Wydawca: University of Lyon 1, France, and Sapienza University of Rome, Italy Diversité et caractéristiques génomiques d'Oenococcus oeni Autorzy: Marc Lorentzen Opublikowane w: PhD Thesis, 2019 Wydawca: University of Bordeaux Contribution of wine microorganisms to the aroma composition of wine and its sensory impact Autorzy: Ines Pereira Biscaia de Oliveira Opublikowane w: PhD Thesis, 2019 Wydawca: Universidad de Zaragoza Grape Evolution in the Human Environment Autorzy: Hsiao-Lei Liu Opublikowane w: PhD Thesis, 2019 Wydawca: University of Warwick Analysis of grape wine microbiota from different wine producing regions and thier plant growth promoting properties Autorzy: Mónica Oyuela Aguilar Opublikowane w: PhD Thesis, 2019 Wydawca: UNLP Metagenomics in wine fermentation Autorzy: Franziska Klinke Opublikowane w: PhD Thesis, 2019 Wydawca: Technical University of Denmark (DTU) Exploring the molecular basis of microbial wine-terroir Autorzy: Alex Gobbi Opublikowane w: PhD thesis, 2019 Wydawca: Aarhus University Frontiers in the control of pathogenic fungi associated with the esca disease complex Autorzy: Giovanni Del Frari Opublikowane w: 2019 Wydawca: University of Lisbon Post-alcoholic fermentation micro-ecology of wines: the role of phenolic composition and the effects on quality Autorzy: Ingrid Collombel Opublikowane w: 2018 Wydawca: University of Porto Other (2) Seasonal microbial dynamics on grapevine leaves under biocontrol and copper fungicide treatments Autorzy: Gobbi Alex, Kyrkou Ifigeneia, Filippi Elisa, Ellegaard-Jensen Lea, Hansen Lars Hestbjerg Opublikowane w: Bioxriv, 2018 Wydawca: Bioxriv DOI: 10.1101/523977 Analysing complex metagenomic data with MicroWineBar Autorzy: Franziska Klincke, Martin Abel-Kistrup, Sofie Maria Gilberte Saerens, Simon Rasmussen Opublikowane w: Biorxiv, 2019 Wydawca: Biorxiv DOI: 10.1101/742684 Wyszukiwanie danych OpenAIRE... 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