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Local Training Network on Novel Tailor-Made Antimicrobials and Delivery Strategies From Synthesis towards Clinical Applications

Publikacje

Photoactivation of MDM2 Inhibitors: Controlling Protein–Protein Interaction with Light

Autorzy: Mickel J. Hansen, Femke M. Feringa, Piermichele Kobauri, Wiktor Szymanski, René H. Medema, Ben L. Feringa
Opublikowane w: Journal of the American Chemical Society, Numer 140/41, 2018, Strona(/y) 13136-13141, ISSN 0002-7863
Wydawca: American Chemical Society
DOI: 10.1021/jacs.8b04870

Deciphering Physiological Functions of AHL Quorum Quenching Acylases

Autorzy: Putri D. Utari, Jan Vogel, Wim J. Quax
Opublikowane w: Frontiers in Microbiology, Numer 8, 2017, ISSN 1664-302X
Wydawca: Frontiers Media
DOI: 10.3389/fmicb.2017.01123

Impact of solid surface hydrophobicity and micrococcal nuclease production on Staphylococcus aureus Newman biofilms

Autorzy: Abigail M. Forson, Henny C. van der Mei, Jelmer Sjollema
Opublikowane w: Scientific Reports, Numer 10/1, 2020, ISSN 2045-2322
Wydawca: Nature Publishing Group
DOI: 10.1038/s41598-020-69084-x

Multimodal imaging guides surgical management in a preclinical spinal implant infection model

Autorzy: Stephen D. Zoller, Howard Y. Park, Tove Olafsen, Charles Zamilpa, Zachary D.C. Burke, Gideon Blumstein, William L. Sheppard, Christopher D. Hamad, Kellyn R. Hori, Jen-Chieh Tseng, Julie Czupryna, Craig McMannus, Jason T. Lee, Mafalda Bispo, Francisco Romero Pastrana, Elisa J.M. Raineri, Jeffery F. Miller, Lloyd S. Miller, Jan Maarten van Dijl, Kevin P. Francis, Nicholas M. Bernthal
Opublikowane w: JCI Insight, Numer 4/3, 2019, ISSN 2379-3708
Wydawca: JCI Insight
DOI: 10.1172/jci.insight.124813

Photopharmacological Manipulation of Mammalian CRY1 for Regulation of the Circadian Clock

Autorzy: Dušan Kolarski, Simon Miller, Tsuyoshi Oshima, Yoshiko Nagai, Yugo Aoki, Piermichele Kobauri, Ashutosh Srivastava, Akiko Sugiyama, Kazuma Amaike, Ayato Sato, Florence Tama, Wiktor Szymanski, Ben L. Feringa, Kenichiro Itami, Tsuyoshi Hirota
Opublikowane w: Journal of the American Chemical Society, Numer 143/4, 2021, Strona(/y) 2078-2087, ISSN 0002-7863
Wydawca: American Chemical Society
DOI: 10.1021/jacs.0c12280

Mechanism of Resistance Development in E. coli against TCAT, a Trimethoprim-Based Photoswitchable Antibiotic

Autorzy: Anna I. Lauxen, Piermichele Kobauri, Michael Wegener, Mickel J. Hansen, Nicole S. Galenkamp, Giovanni Maglia, Wiktor Szymanski, Ben L. Feringa, Oscar P. Kuipers
Opublikowane w: Pharmaceuticals, Numer 14/5, 2021, Strona(/y) 392, ISSN 1424-8247
Wydawca: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ph14050392

Photochemical control of bacterial gene expression based on trans encoded genetic switches

Autorzy: Avishek Paul, Jingyi Huang, Yanxiao Han, Xintong Yang, Lela Vuković, Petr Král, Lifei Zheng, Andreas Herrmann
Opublikowane w: Chemical Science, Numer 12/7, 2021, Strona(/y) 2646-2654, ISSN 2041-6520
Wydawca: Royal Society of Chemistry
DOI: 10.1039/d0sc05479h

Time-resolved analysis of Staphylococcus aureus invading the endothelial barrier

Autorzy: Elisa J.M. Raineri, Harita Yedavally, Anna Salvati, Jan Maarten van Dijl
Opublikowane w: Virulence, Numer 11/1, 2020, Strona(/y) 1623-1639, ISSN 2150-5594
Wydawca: Landes Bioscience
DOI: 10.1080/21505594.2020.1844418

Rational design of a photoswitchable DNA glue enabling high regulatory function and supramolecular chirality transfer

Autorzy: Nadja A. Simeth, Shotaro Kobayashi, Piermichele Kobauri, Stefano Crespi, Wiktor Szymanski, Kazuhiko Nakatani, Chikara Dohno, Ben L. Feringa
Opublikowane w: Chemical Science, Numer 12/26, 2021, Strona(/y) 9207-9220, ISSN 2041-6520
Wydawca: Royal Society of Chemistry
DOI: 10.1039/d1sc02194j

Cytotoxicity of fractured quartz on THP-1 human macrophages: role of the membranolytic activity of quartz and phagolysosome destabilization

Autorzy: Riccardo Leinardi, Cristina Pavan, Harita Yedavally, Maura Tomatis, Anna Salvati, Francesco Turci
Opublikowane w: Archives of Toxicology, Numer 94/9, 2020, Strona(/y) 2981-2995, ISSN 0340-5761
Wydawca: Springer Verlag
DOI: 10.1007/s00204-020-02819-x

Draft Genome Sequences of Four Bacterial Strains of Heterotrophic Alteromonas macleodii and Marinobacter , Isolated from a Nonaxenic Culture of Two Marine Synechococcus Strains

Autorzy: Patricia Arias-Orozco, Yunhai Yi, Oscar P. Kuipers
Opublikowane w: Microbiology Resource Announcements, Numer 10/19, 2021, ISSN 2576-098X
Wydawca: ASM Microbiology Resource Announcements
DOI: 10.1128/mra.00116-21

Biaryl sulfonamides as cisoid azosteres for photopharmacology

Autorzy: Piermichele Kobauri, Wiktor Szymanski, Fangyuan Cao, Sebastian Thallmair, Siewert J. Marrink, Martin D. Witte, Frank J. Dekker, Ben L. Feringa
Opublikowane w: Chemical Communications, Numer 57/34, 2021, Strona(/y) 4126-4129, ISSN 1359-7345
Wydawca: Royal Society of Chemistry
DOI: 10.1039/d1cc00950h

Light-controlled inhibition of BRAFV600E kinase

Autorzy: Mark W.H. Hoorens, Maria E. Ourailidou, Theo Rodat, Petra E. van der Wouden, Piermichele Kobauri, Malte Kriegs, Christian Peifer, Ben L. Feringa, Frank J. Dekker, Wiktor Szymanski
Opublikowane w: European Journal of Medicinal Chemistry, Numer 179, 2019, Strona(/y) 133-146, ISSN 0223-5234
Wydawca: Elsevier BV
DOI: 10.1016/j.ejmech.2019.06.042

Biocatalytically induced surface modification of the tobacco mosaic virus and the bacteriophage M13

Autorzy: Valentina Vignali, Barbara S. Miranda, Irene Lodoso-Torrecilla, Cathelijn A. J. van Nisselroy, Bas-Jan Hoogenberg, Sybren Dantuma, Frank Hollmann, Jan Willem de Vries, Eliza M. Warszawik, Rainer Fischer, Ulrich Commandeur, Patrick van Rijn
Opublikowane w: Chemical Communications, Numer 55/1, 2019, Strona(/y) 51-54, ISSN 1359-7345
Wydawca: Royal Society of Chemistry
DOI: 10.1039/c8cc08042a

Identification of a conserved N‐terminal domain in the first module of ACV synthetases

Autorzy: Riccardo Iacovelli, László Mózsik, Roel A.L. Bovenberg, Arnold J.M. Driessen
Opublikowane w: MicrobiologyOpen, Numer 10/1, 2021, Strona(/y) e1145, ISSN 2045-8827
Wydawca: John Wiley and Sons Inc.
DOI: 10.1002/mbo3.1145

Antimicrobial Nanogels with Nanoinjection Capabilities for Delivery of the Hydrophobic Antibacterial Agent Triclosan

Autorzy: Guangyue Zu, Magdalena Steinmüller, Damla Keskin, Henny C. van der Mei, Olga Mergel, Patrick van Rijn
Opublikowane w: ACS Applied Polymer Materials, Numer 2/12, 2020, Strona(/y) 5779-5789, ISSN 2637-6105
Wydawca: ACS Applied Polymer Materials
DOI: 10.1021/acsapm.0c01031

Fighting Staphylococcus aureus infections with light and photoimmunoconjugates

Autorzy: Mafalda Bispo, Andrea Anaya-Sanchez, Sabrina Suhani, Elisa J. M. Raineri, Marina López-Álvarez, Marjolein Heuker, Wiktor Szymański, Francisco Romero Pastrana, Girbe Buist, Alexander R. Horswill, Kevin P. Francis, Gooitzen M. van Dam, Marleen van Oosten, Jan Maarten van Dijl
Opublikowane w: JCI Insight, Numer 5/22, 2020, ISSN 2379-3708
Wydawca: JCI insight
DOI: 10.1172/jci.insight.139512

A synthetic metabolic network for physicochemical homeostasis

Autorzy: Tjeerd Pols, Hendrik R. Sikkema, Bauke F. Gaastra, Jacopo Frallicciardi, Wojciech M. Śmigiel, Shubham Singh, Bert Poolman
Opublikowane w: Nature Communications, Numer 10/1, 2019, ISSN 2041-1723
Wydawca: Nature Publishing Group
DOI: 10.1038/s41467-019-12287-2

The Relationship between Bulk Silicone and Benzophenone-Initiated Hydrogel Coating Properties

Autorzy: Damla Keskin, Taraneh Mokabbar, Yutao Pei, Patrick van Rijn
Opublikowane w: Polymers, Numer 10/5, 2018, Strona(/y) 534, ISSN 2073-4360
Wydawca: MDPI
DOI: 10.3390/polym10050534

Staphylococcal trafficking and infection—from ‘nose to gut’ and back

Autorzy: Elisa J M Raineri, Dania Altulea, Jan Maarten van Dijl
Opublikowane w: FEMS Microbiology Reviews, 2021, ISSN 1574-6976
Wydawca: FEMS Microbiology Reviews
DOI: 10.1093/femsre/fuab041

Enhanced bacterial killing by vancomycin in staphylococcal biofilms disrupted by novel, DMMA-modified carbon dots depends on EPS production

Autorzy: Yanyan Wu, Henny C. van der Mei, Henk J. Busscher, Yijin Ren
Opublikowane w: Colloids and Surfaces B: Biointerfaces, Numer 193, 2020, Strona(/y) 111114, ISSN 0927-7765
Wydawca: Elsevier BV
DOI: 10.1016/j.colsurfb.2020.111114

Significant Upregulation of Alzheimer's β‐Amyloid Levels in a Living System Induced by Extracellular Elastin Polypeptides

Autorzy: Chao Ma, Juanjuan Su, Yao Sun, Yang Feng, Nolan Shen, Bo Li, Yingxia Liang, Xintong Yang, Hui Wu, Hongjie Zhang, Andreas Herrmann, Rudolph E. Tanzi, Kai Liu, Can Zhang
Opublikowane w: Angewandte Chemie International Edition, Numer 58/51, 2019, Strona(/y) 18703-18709, ISSN 1433-7851
Wydawca: John Wiley & Sons Ltd.
DOI: 10.1002/anie.201912399

Immobilized Acylase PvdQ Reduces Pseudomonas aeruginosa Biofilm Formation on PDMS Silicone

Autorzy: Jan Vogel, Marijke Wakker-Havinga, Rita Setroikromo, Wim J. Quax
Opublikowane w: Frontiers in Chemistry, Numer 8, 2020, ISSN 2296-2646
Wydawca: Frontiers Media
DOI: 10.3389/fchem.2020.00054

Highly Efficient Antimicrobial and Antifouling Surface Coatings with Triclosan-Loaded Nanogels

Autorzy: Damla Keskin, Lisa Tromp, Olga Mergel, Guangyue Zu, Eliza Warszawik, Henny C. van der Mei, Patrick van Rijn
Opublikowane w: ACS Applied Materials & Interfaces, Numer 12/52, 2020, Strona(/y) 57721-57731, ISSN 1944-8244
Wydawca: American Chemical Society
DOI: 10.1021/acsami.0c18172

De novo rational design of a freestanding, supercharged polypeptide, proton-conducting membrane

Autorzy: Chao Ma, Jingjin Dong, Marco Viviani, Isotta Tulini, Nicola Pontillo, Sourav Maity, Yu Zhou, Wouter H. Roos, Kai Liu, Andreas Herrmann, Giuseppe Portale
Opublikowane w: Science Advances, Numer 6/29, 2020, Strona(/y) eabc0810, ISSN 2375-2548
Wydawca: American Association for the Advancement of Science
DOI: 10.1126/sciadv.abc0810

A Penicillium rubens platform strain for secondary metabolite production

Autorzy: Carsten Pohl, Fabiola Polli, Tabea Schütze, Annarita Viggiano, László Mózsik, Sascha Jung, Maaike de Vries, Roel A. L. Bovenberg, Vera Meyer, Arnold J. M. Driessen
Opublikowane w: Scientific Reports, Numer 10/1, 2020, Strona(/y) 7360, ISSN 2045-2322
Wydawca: Nature Publishing Group
DOI: 10.1038/s41598-020-64893-6

Determining the Virulence Properties of Escherichia coli ST131 Containing Bacteriocin-Encoding Plasmids Using Short- and Long-Read Sequencing and Comparing Them with Those of Other E. coli Lineages

Autorzy: da Cruz Campos, Cavallo, L. Andrade, van Dijl, Couto, Zrimec, Lo Ten Foe, P. Rosa, V. Damasco, Friedrich, Chlebowicz-Flissikowska, Rossen
Opublikowane w: Microorganisms, Numer 7/11, 2019, Strona(/y) 534, ISSN 2076-2607
Wydawca: Microorganisms
DOI: 10.3390/microorganisms7110534

Inheritance of physico-chemical properties and ROS generation by carbon quantum dots derived from pyrolytically carbonized bacterial sources

Autorzy: Y. Wu, H. Wei, H.C. van der Mei, J. de Vries, H.J. Busscher, Y. Ren
Opublikowane w: Materials Today Bio, Numer 12, 2021, Strona(/y) 100151, ISSN 2590-0064
Wydawca: Elsevier
DOI: 10.1016/j.mtbio.2021.100151

Synthetic control devices for gene regulation in Penicillium chrysogenum

Autorzy: László Mózsik, Zsófia Büttel, Roel A. L. Bovenberg, Arnold J. M. Driessen, Yvonne Nygård
Opublikowane w: Microbial Cell Factories, Numer 18/1, 2019, Strona(/y) 203, ISSN 1475-2859
Wydawca: BioMed Central
DOI: 10.1186/s12934-019-1253-3

Carbon Quantum Dots Derived from Different Carbon Sources for Antibacterial Applications

Autorzy: Yanyan Wu, Cong Li, Henny C. van der Mei, Henk J. Busscher, Yijin Ren
Opublikowane w: Antibiotics, Numer 10/6, 2021, Strona(/y) 623, ISSN 2079-6382
Wydawca: MDPI
DOI: 10.3390/antibiotics10060623

Stereoselective Protection-Free Modification of 3-Keto-saccharides

Autorzy: Nittert Marinus, Nabil Tahiri, Margherita Duca, L. M. C. Marc Mouthaan, Simona Bianca, Marco van den Noort, Bert Poolman, Martin D. Witte, Adriaan J. Minnaard
Opublikowane w: Organic Letters, Numer 22/14, 2020, Strona(/y) 5622-5626, ISSN 1523-7060
Wydawca: American Chemical Society
DOI: 10.1021/acs.orglett.0c01986

Inhibiting Bacterial Adhesion by Mechanically Modulated Microgel Coatings

Autorzy: Damla Keskin, Olga Mergel, Henny C. van der Mei, Henk J. Busscher, Patrick van Rijn
Opublikowane w: Biomacromolecules, Numer 20/1, 2019, Strona(/y) 243-253, ISSN 1525-7797
Wydawca: American Chemical Society
DOI: 10.1021/acs.biomac.8b01378

Metabolic Cross-talk Between Human Bronchial Epithelial Cells and Internalized Staphylococcus aureus as a Driver for Infection*

Autorzy: Laura M. Palma Medina, Ann-Kristin Becker, Stephan Michalik, Harita Yedavally, Elisa J.M. Raineri, Petra Hildebrandt, Manuela Gesell Salazar, Kristin Surmann, Henrike Pförtner, Solomon A. Mekonnen, Anna Salvati, Lars Kaderali, Jan Maarten van Dijl, Uwe Völker
Opublikowane w: Molecular & Cellular Proteomics, Numer 18/5, 2019, Strona(/y) 892-908, ISSN 1535-9476
Wydawca: American Society for Biochemistry and Molecular Biology Inc.
DOI: 10.1074/mcp.ra118.001138

Modular Medical Imaging Agents Based on Azide–Alkyne Huisgen Cycloadditions: Synthesis and Pre‐Clinical Evaluation of 18 F‐Labeled PSMA‐Tracers for Prostate Cancer Imaging

Autorzy: Verena I. Böhmer, Wiktor Szymanski, Keimpe‐Oeds Berg, Chantal Mulder, Piermichele Kobauri, Hugo Helbert, Dion Born, Friederike Reeβing, Anja Huizing, Marten Klopstra, Douwe F. Samplonius, Ines F. Antunes, Jürgen W. A. Sijbesma, Gert Luurtsema, Wijnand Helfrich, Ton J. Visser, Ben L. Feringa, Philip H. Elsinga
Opublikowane w: Chemistry – A European Journal, Numer 26/47, 2020, Strona(/y) 10871-10881, ISSN 0947-6539
Wydawca: John Wiley & Sons Ltd.
DOI: 10.1002/chem.202001795

Functional Expression and Characterization of the Highly Promiscuous Lanthipeptide Synthetase SyncM, Enabling the Production of Lanthipeptides with a Broad Range of Ring Topologies

Autorzy: Patricia Arias-Orozco, Maartje Inklaar, Judith Lanooij, Rubén Cebrián, Oscar P. Kuipers
Opublikowane w: ACS Synthetic Biology, Numer 10/10, 2021, Strona(/y) 2579-2591, ISSN 2161-5063
Wydawca: American Chemical Society
DOI: 10.1021/acssynbio.1c00224

CRISPR-based transcriptional activation tool for silent genes in filamentous fungi

Autorzy: László Mózsik, Mirthe Hoekzema, Niels A. W. de Kok, Roel A. L. Bovenberg, Yvonne Nygård, Arnold J. M. Driessen
Opublikowane w: Scientific Reports, Numer 11/1, 2021, Strona(/y) 20129, ISSN 2045-2322
Wydawca: Nature Publishing Group
DOI: 10.1038/s41598-020-80864-3

Bdellovibrio bacteriovorus : a potential ‘living antibiotic’ to control bacterial pathogens

Autorzy: Francis M. Cavallo, Lorea Jordana, Alexander W. Friedrich, Corinna Glasner, Jan Maarten van Dijl
Opublikowane w: Critical Reviews in Microbiology, Numer 47/5, 2021, Strona(/y) 630-646, ISSN 1040-841X
Wydawca: Taylor & Francis
DOI: 10.1080/1040841x.2021.1908956

Low nanogel stiffness favors nanogel transcytosis across an in vitro blood–brain barrier

Autorzy: Laís Ribovski, Edwin de Jong, Olga Mergel, Guangyue Zu, Damla Keskin, Patrick van Rijn, Inge S. Zuhorn
Opublikowane w: Nanomedicine: Nanotechnology, Biology and Medicine, Numer 34, 2021, Strona(/y) 102377, ISSN 1549-9634
Wydawca: Elsevier BV
DOI: 10.1016/j.nano.2021.102377

Nanogels: A novel approach in antimicrobial delivery systems and antimicrobial coatings

Autorzy: Damla Keskin, Guangyue Zu, Abigail M. Forson, Lisa Tromp, Jelmer Sjollema, Patrick van Rijn
Opublikowane w: Bioactive Materials, Numer 6/10, 2021, Strona(/y) 3634-3657, ISSN 2452-199X
Wydawca: Bioactive Materials
DOI: 10.1016/j.bioactmat.2021.03.004

Mechanochemical bond scission for the activation of drugs

Autorzy: Shuaidong Huo, Pengkun Zhao, Zhiyuan Shi, Miancheng Zou, Xintong Yang, Eliza Warszawik, Mark Loznik, Robert Göstl, Andreas Herrmann
Opublikowane w: Nature Chemistry, Numer 13/2, 2021, Strona(/y) 131-139, ISSN 1755-4330
Wydawca: Nature Publishing Group
DOI: 10.1038/s41557-020-00624-8

Weak Acid Permeation in Synthetic Lipid Vesicles and Across the Yeast Plasma Membrane

Autorzy: Matteo Gabba, Jacopo Frallicciardi, Joury van ’t Klooster, Ryan Henderson, Łukasz Syga, Robert Mans, Antonius J.A. van Maris, Bert Poolman
Opublikowane w: Biophysical Journal, Numer 118/2, 2020, Strona(/y) 422-434, ISSN 0006-3495
Wydawca: Biophysical Society
DOI: 10.1016/j.bpj.2019.11.3384

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