The role of cell-to-cell variability in pneumococcal virulence and antibiotic resistance

Publikacje

Amoxicillin-resistant Streptococcus pneumoniae can be resensitized by targeting the mevalonate pathway as indicated by sCRilecs-seq

Autorzy: Liselot Dewachter, Julien Dénéréaz, Xue Liu, Vincent de Bakker, Charlotte Costa, Mara Baldry, Jean-Claude Sirard, Jan-Willem Veening
Opublikowane w: eLife, 2022, ISSN 2050-084X
Wydawca: eLife Sciences Publications
DOI: 10.7554/elife.75607

Harnessing CRISPR-Cas9 for Genome Editing in Streptococcus pneumoniae D39V

Autorzy: Dimitra Synefiaridou, Jan-Willem Veening
Opublikowane w: Applied and Environmental Microbiology, Numer 87/6, 2021, ISSN 0099-2240
Wydawca: American Society for Microbiology
DOI: 10.1128/aem.02762-20

CcrZ is a pneumococcal spatiotemporal cell cycle regulator that interacts with FtsZ and controls DNA replication by modulating the activity of DnaA

Autorzy: Clement Gallay, Stefano Sanselicio, Mary E. Anderson, Young Min Soh, Xue Liu, Gro A. Stamsås, Simone Pelliciari, Renske van Raaphorst, Julien Dénéréaz, Morten Kjos, Heath Murray, Stephan Gruber, Alan D. Grossman, Jan-Willem Veening
Opublikowane w: Nature Microbiology, Numer 6/9, 2021, Strona(/y) 1175-1187, ISSN 2058-5276
Wydawca: NPG
DOI: 10.1038/s41564-021-00949-1

Switching off: The phenotypic transition to the uninduced state of the lactose uptake pathway

Autorzy: Prasanna M Bhogale, Robin A Sorg, Jan-Willem Veening, Johannes Berg
Opublikowane w: Biophys J ., 2022, ISSN 0006-3495
Wydawca: Biophysical Society
DOI: 10.1016/j.bpj.2021.12.027

Exploration of Bacterial Bottlenecks and Streptococcus pneumoniae Pathogenesis by CRISPRi-Seq

Autorzy: Xue Liu, Jacqueline M Kimmey, Laura Matarazzo, Vincent de Bakker, Laurye Van Maele, Jean-Claude Sirard, Victor Nizet, Jan-Willem Veening
Opublikowane w: Cell Host & Microbe, 2021, ISSN 1931-3128
Wydawca: Cell Press
DOI: 10.1016/j.chom.2020.10.001

The acquisition of clinically relevant amoxicillin resistance in Streptococcus pneumoniae requires ordered horizontal gene transfer of four loci

Autorzy: Paddy S Gibson, Evan Bexkens, Sylvia Zuber, Lauren A Cowley , Jan-Willem Veening
Opublikowane w: Plos Pathogens, 2022, ISSN 1553-7366
Wydawca: Public Library of Science
DOI: 10.1371/journal.ppat.1010727

2FAST2Q: a general-purpose sequence search and counting program for FASTQ files

Autorzy: Afonso M Bravo, Athanasios Typas, Jan-Willem Veening
Opublikowane w: PeerJ, 2022, ISSN 2167-8359
Wydawca: PeerJ
DOI: 10.7717/peerj.14041

Unbiased homeologous recombination during pneumococcal transformation allows for multiple chromosomal integration events

Autorzy: Jun Kurushima, Nathalie Campo, Renske van Raaphorst, Guillaume Cerckel, Patrice Polard, Jan-Willem Veening
Opublikowane w: eLife, Numer 9, 2020, ISSN 2050-084X
Wydawca: eLife Sciences Publications
DOI: 10.7554/elife.58771

Mechanistic basis of choline import involved in teichoic acids and lipopolysaccharide modification

Autorzy: Natalie Bärland, Anne-Stéphanie Rueff, Gonzalo Cebrero, Cedric A J Hutter, Markus A Seeger, Jan-Willem Veening, Camilo Perez
Opublikowane w: Science Advances, 2022, ISSN 2375-2548
Wydawca: American Association for the Advancement of Science
DOI: 10.1126/sciadv.abm1122

RocS drives chromosome segregation and nucleoid protection in Streptococcus pneumoniae

Autorzy: Chryslène Mercy, Adrien Ducret, Jelle Slager, Jean-Pierre Lavergne, Céline Freton, Sathya Narayanan Nagarajan, Pierre Simon Garcia, Marie-Francoise Noirot-Gros, Nelly Dubarry, Julien Nourikyan, Jan-Willem Veening, Christophe Grangeasse
Opublikowane w: Nature Microbiology, 2019, ISSN 2058-5276
Wydawca: Nature
DOI: 10.1038/s41564-019-0472-z

Three New Integration Vectors and Fluorescent Proteins for Use in the Opportunistic Human Pathogen Streptococcus pneumoniae

Autorzy: Lance E. Keller, Anne-Stéphanie Rueff, Jun Kurushima, Jan-Willem Veening
Opublikowane w: Genes, Numer 10/5, 2019, Strona(/y) 394, ISSN 2073-4425
Wydawca: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/genes10050394

Refining the Pneumococcal Competence Regulon by RNA Sequencing

Autorzy: Jelle Slager, Rieza Aprianto, Jan-Willem Veening
Opublikowane w: Journal of Bacteriology, Numer 201/13, 2019, ISSN 0021-9193
Wydawca: American Society for Microbiology
DOI: 10.1128/jb.00780-18

BactMAP: An R package for integrating, analyzing and visualizing bacterial microscopy data

Autorzy: Renske Raaphorst, Morten Kjos, Jan‐Willem Veening
Opublikowane w: Molecular Microbiology, Numer 113/1, 2019, Strona(/y) 297-308, ISSN 0950-382X
Wydawca: Blackwell Publishing Inc.
DOI: 10.1111/mmi.14417

Structure of a proton-dependent lipid transporter involved in lipoteichoic acids biosynthesis

Autorzy: Bing Zhang, Xue Liu, Elisabeth Lambert, Guillaume Mas, Sebastian Hiller, Jan-Willem Veening, Camilo Perez
Opublikowane w: Nature Structural & Molecular Biology, 2020, ISSN 1545-9993
Wydawca: Nature Publishing Group
DOI: 10.1038/s41594-020-0425-5

Gaps in the wall: understanding cell wall biology to tackle amoxicillin resistance in Streptococcus pneumoniae

Autorzy: Paddy S Gibson, Jan-Willem Veening
Opublikowane w: Curr Opin Microbiol., 2023, ISSN 1369-5274
Wydawca: Elsevier BV
DOI: 10.1016/j.mib.2022.102261

Synthetic genetic oscillators demonstrate the functional importance of phenotypic variation in pneumococcal-host interactions

Autorzy: Anne-Stéphanie Rueff, Renske van Raaphorst, Surya D Aggarwal, Javier Santos-Moreno, Géraldine Laloux, Yolanda Schaerli, Jeffrey N Weiser, Jan-Willem Veening
Opublikowane w: Nature Communications, Numer 14(1):7454, 2023, ISSN 2041-1723
Wydawca: Nature Publishing Group
DOI: 10.1038/s41467-023-43241-y

Competence remodels the pneumococcal cell wall exposing key surface virulence factors that mediate increased host adherence

Autorzy: Vikrant Minhas, Arnau Domenech, Dimitra Synefiaridou, Daniel Straume, Max Brendel, Gonzalo Cebrero, Xue Liu, Charlotte Costa, Mara Baldry, Jean-Claude Sirard, Camilo Perez, Nicolas Gisch, Sven Hammerschmidt, Leiv Sigve Håvarstein, Jan-Willem Veening
Opublikowane w: Plos Biology, 2023, ISSN 1544-9173
Wydawca: Public Library of Science
DOI: 10.1371/journal.pbio.3001990

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