From GWAS to functional studies: Tackling the complex nature of brain disorders

Rezultaty

After 6 months the initial data management plan will be delivered and updated during the lifespan of the project.

Publikacje

An integrated framework for local genetic correlation analysis

Autorzy: Josefin Werme, Sophie van der Sluis, Danielle Posthuma, Christiaan de Leeuw
Opublikowane w: Nature Genetics, Numer March 14, 2022, 2022, ISSN 1061-4036
Wydawca: Nature Publishing Group
DOI: 10.1101/2020.12.31.424652

Statistical testing in transcriptomic-neuroimaging studies: A how-to and evaluation of methods assessing spatial and gene specificity

Autorzy: Yongbin Wei, Siemon C. de Lange, Rory Pijnenburg, Lianne H. Scholtens, Dirk Jan Ardesch, Kyoko Watanabe, Danielle Posthuma, Martijn P. van den Heuvel
Opublikowane w: Human Brain Mapping, Numer Feb 15 2022, 2021, Strona(/y) 885-901, ISSN 1097-0193
Wydawca: Wiley Online Library
DOI: 10.1002/hbm.25711

Genome-wide association study of cerebellar volume provides insights into heritable mechanisms underlying brain development and mental health

Autorzy: Elleke Tissink; Siemon C. de Lange; Jeanne E. Savage; Douglas P. Wightman; Christiaan A. de Leeuw; Kristen M. Kelly; Mats Nagel; Martijn P. van den Heuvel; Danielle Posthuma
Opublikowane w: Communications Biology, Numer 5(710), 2022, ISSN 2399-3642
Wydawca: Springer Nature
DOI: 10.1038/s42003-022-03672-7

Genome-wide meta-analysis for Alzheimer’s disease cerebrospinal fluid biomarkers

Autorzy: Jansen, Iris; van der Lee, Sven J; Bellenguez, Céline; Ramakers, Inez; Rodriguez-Rodriguez, Eloy; Rujescu, Dan; Saltvedt, Ingvild; Sanchez-Juan, Pascual; Scheltens, Philip; Scherbaum, Norbert; Schmid, Matthias; Schneider, Anja; Selbæk, Geir; Kleineidam, Luca; Selnes, Per; Shadrin, Alexey; Skoog, Ingmar; Soininen, Hilkka; Tárraga, Lluís; Teipel, Stefan; group, GR@ACE study; Tijms, Betty; Tsolak
Opublikowane w: Acta Neuropathologica, Numer Volume 144, 2022, Strona(/y) 821-842, ISSN 0001-6322
Wydawca: Springer Verlag
DOI: 10.1007/s00401-022-02454-z

The Genetic Architectures of Functional and Structural Connectivity Properties within Cerebral Resting-State Networks

Autorzy: Elleke Tissink; Josefin Werme; Siemon C. de Lange; Jeanne E. Savage; Yongbin Wei; Christiaan A. de Leeuw; Mats Nagel; Danielle Posthuma; Martijn P. van den Heuvel
Opublikowane w: eNeuro, Numer 10(4), 2023, ISSN 2373-2822
Wydawca: Society for Neuroscience
DOI: 10.1523/eneuro.0242-22.2023

Genome-wide meta-analysis of brain volume identifies genomic loci and genes shared with intelligence

Autorzy: Philip R. Jansen, Mats Nagel, Kyoko Watanabe, Yongbin Wei, Jeanne E. Savage, Christiaan A. de Leeuw, Martijn P. van den Heuvel, Sophie van der Sluis & Danielle Posthuma
Opublikowane w: Nature Communications, Numer November 5, 2020, 2020, Strona(/y) Article Number: 5606, ISSN 2041-1723
Wydawca: Nature Publishing Group
DOI: 10.1038/s41467-020-19378-5

Genome-wide association studies of polygenic risk score-derived phenotypes may lead to inflated false positive rates

Autorzy: Emil Uffelmann, Danielle Posthuma, Wouter J. Peyrot
Opublikowane w: Scientific Reports - Nature, Numer 4219 (2023), 2023, ISSN 2045-2322
Wydawca: Nature Publishing Group
DOI: 10.1038/s41598-023-29428-9

Genome-wide meta-analysis of insomnia prioritizes genes associated with metabolic and psychiatric pathways

Autorzy: Kyoko Watanabe; Philip R. Jansen; Jeanne E. Savage; Priyanka Nandakumar; Xin Wang; Michelle Agee; Stella Aslibekyan; Adam Auton; Robert K. Bell; Katarzyna Bryc; Sarah K. Clark; Sarah L. Elson; Kipper Fletez-Brant; Pierre Fontanillas; Nicholas A. Furlotte; Pooja M. Gandhi; Karl Heilbron; Barry Hicks; Karen E. Huber; Ethan M. Jewett; Yunxuan Jiang; Aaron Kleinman; Keng-Han Lin; Nadia K. Litterman; J
Opublikowane w: Nature Genetics, Numer 54(8), 2022, Strona(/y) 1125-1132, ISSN 1061-4036
Wydawca: Nature Publishing Group
DOI: 10.1038/s41588-022-01124-w

The genetic overlap between Alzheimer’s disease, amyotrophic lateral sclerosis, Lewy body dementia, and Parkinson’s disease

Autorzy: Douglas P. Wightman, Jeanne E. Savage, Elleke Tissink, Cato Romero, Iris E. Jansen, Danielle Posthuma
Opublikowane w: Neurobiology of Aging, Numer Volume 127, 2023, Strona(/y) 99-112, ISSN 0197-4580
Wydawca: Elsevier BV
DOI: 10.1016/j.neurobiolaging.2023.03.004

Emerging Methods and Resources for Biological Interrogation of Neuropsychiatric Polygenic Signal

Autorzy: Emil Uffelmann, Danielle Posthuma
Opublikowane w: Biological Psychiatry, Numer 89/1, 2021, Strona(/y) 41-53, ISSN 0006-3223
Wydawca: Elsevier BV
DOI: 10.1016/j.biopsych.2020.05.022

Genome-wide gene-environment interactions in neuroticism: an exploratory study across 25 environments

Autorzy: Josefin Werme, Sophie van der Sluis, Danielle Posthuma & Christiaan A. de Leeuw
Opublikowane w: Translational Psychiatry, Numer March 22, 2021, 2021, Strona(/y) Article number: 180, ISSN 2158-3188
Wydawca: Nature Publishing Group
DOI: 10.1038/s41398-021-01334-6

A genome-wide association study with 1,126,563 individuals identifies new risk loci for Alzheimer’s disease

Autorzy: Douglas P. Wightman, Iris E. Jansen, Jeanne E. Savage, Alexey A. Shadrin, Shahram Bahrami, Dominic Holland, Arvid Rongve, Sigrid Børte, Bendik S. Winsvold, Ole Kristian Drange, Amy E. Martinsen, Anne Heidi Skogholt, Cristen Willer, Geir Bråthen, Ingunn Bosnes, Jonas Bille Nielsen, Lars G. Fritsche, Laurent F. Thomas, Linda M. Pedersen, Maiken E. Gabrielsen, Marianne Bakke Johnsen, Tore Wergeland
Opublikowane w: Nature Genetics, Numer September 7, 2021, 2021, Strona(/y) 1276–1282, ISSN 1061-4036
Wydawca: Nature Publishing Group
DOI: 10.1038/s41588-021-00977-x

Exploring the genetic overlap between twelve psychiatric disorders

Autorzy: ato Romero, Josefin Werme, Philip R. Jansen, Joel Gelernter, Murray B. Stein, Daniel Levey, Renato Polimanti, Christiaan de Leeuw, Danielle Posthuma, Mats Nagel, Sophie van der Sluis
Opublikowane w: Nature Genetics, Numer 54, 2022, Strona(/y) 1795-1802, ISSN 1061-4036
Wydawca: Nature Publishing Group
DOI: 10.1038/s41588-022-01245-2

On the interpretation of transcriptome-wide association studies

Autorzy: Christiaan de Leeuw, Josefin Werme, Jeanne E. Savage, Wouter J. Peyrot, Danielle Posthuma
Opublikowane w: PLOS Genetics, Numer 19(9): e101092, 2023, ISSN 1553-7390
Wydawca: Public Library of Science
DOI: 10.1371/journal.pgen.1010921

Genome-wide association studies

Autorzy: Emil Uffelmann, Qin Qin Huang, Nchangwi Syntia Munung, Jantina de Vries, Yukinori Okada, Alicia R. Martin, Hilary C. Martin, Tuuli Lappalainen & Danielle Posthuma
Opublikowane w: Nature Reviews Methods Primers, Numer August 29, 2021, 2021, Strona(/y) Article number: 59, ISSN 2662-8449
Wydawca: Nature portfolio
DOI: 10.1038/s43586-021-00056-9

Demystifying non-coding GWAS variants: an overview of computational tools and methods

Autorzy: Marijn Schipper, Danielle Posthuma
Opublikowane w: Human Molecular Genetics, Numer Volume 31, Numer R1, 2022, Strona(/y) R73-R83, ISSN 0964-6906
Wydawca: Oxford University Press
DOI: 10.1093/hmg/ddac198

Mapping the genetic evolutionary timeline of human neural and cognitive traits

Autorzy: Ilan Libedinsky; Yongbin Wei; Christiaan de Leeuw; James K. Rilling; Danielle Posthuma; Martijn P. van den Heuvel
Opublikowane w: bioRxiv, Numer Sep 28, 2023, 2023
Wydawca: Cold Spring Harbor Laboratory
DOI: 10.1101/2023.02.05.525539

Genome-wide association study of cerebellar volume

Autorzy: E.P. Tissink, S.C. de Lange, J.E. Savage, D.P. Wightman, K.M. Kelly, M. Nagel, M.P. van den Heuvel, D. Posthuma
Opublikowane w: bioRxiv, Numer November 4, 2021, 2021
Wydawca: bioRxiv
DOI: 10.1101/2021.11.04.467250

Patient iPSC-derived astrocytes with high polygenic risk for schizophrenia reveals a role for mitochondrial glutamate carrier SLC25A18

Autorzy: Stephanie Beekhuis-Hoekstra; Karen Laupman; Yongbin Wei; Kyoko Watanabe; Paulien Cornelissen-Steijger; Patrick Sullivan; Danielle Posthuma; Vivi Heine
Opublikowane w: Research Square, Numer 15 JUl, 2022, 2022, ISSN 2693-5015
Wydawca: Research Square
DOI: 10.21203/rs.3.rs-1811182/v1

Reconsidering the validity of transcriptome-wide association studies

Autorzy: Christiaan de Leeuw, Josefin Werme, Jeanne Savage, Wouter Peyrot, Danielle Posthuma
Opublikowane w: BioRxiv, Numer August 15, 2021, 2021
Wydawca: BioRxiv
DOI: 10.1101/2021.08.15.456414

Estimating Disorder Probability Based on Polygenic Prediction Using the BPC Approach

Autorzy: Emil Uffelmann, Major Depressive Disorder Working Group of the Psychiatric Genomics Consortium, Schizophrenia Working Group of the Psychiatric Genomics Consortium, Alkes L. Price, Danielle Posthuma, Wouter J. Peyrot
Opublikowane w: medRxiv, Numer January 14, 2024, 2024
Wydawca: Cold Spring Harbor Laboratory
DOI: 10.1101/2024.01.12.24301157

Local Genetic Sex Differences in Quantitative Traits

Autorzy: Emil Uffelmann, Christiaan de Leeuw, Danielle Posthuma
Opublikowane w: medRxiv, Numer May 4, 2023, 2023
Wydawca: Cold Spring Harbor Laboratory
DOI: 10.1101/2023.05.04.539410

Rare Variant Aggregation in 148,508 Exomes Identifies Genes Associated with Proxy Alzheimer’s Disease

Autorzy: Douglas P Wightman, Jeanne E Savage, Christiaan A de Leeuw, Iris E Jansen, Danielle Posthuma
Opublikowane w: medRxiv, Numer October 18, 2021, 2021
Wydawca: medRxiv
DOI: 10.1101/2021.10.17.21265070

Genome-wide meta-analysis of insomnia in over 2.3 million individuals implicates involvement of specific biological pathways through gene-prioritization

Autorzy: Kyoko Watanabe, Philip R. Jansen, Jeanne E. Savage, Priyanka Nandakumar, Xin Wang, 23andMe Research Team, David A. Hinds, Joel Gelernter, Daniel F. Levey, Renato Polimanti, Murray B. Stein, Eus J.W. Van Someren, August B. Smit, Danielle Posthuma
Opublikowane w: medRxiv, Numer December 7, 2020, 2020
Wydawca: bioRxiv
DOI: 10.1101/2020.12.07.20245209

Abundant pleiotropy across neuroimaging modalities identified through a multivariate genome-wide association study

Autorzy: E.P. Tissink; A.A. Shadrin; D. van der Meer; N. Parker; G. Hindley; D. Roelfs; O. Frei; C.C. Fan; M. Nagel; T. Nærland; M. Budisteanu; S. Djurovic; L. T. Westlye; M.P. van den Heuvel; D. Posthuma; T. Kaufmann; A.M. Dale; O.A. Andreassen
Opublikowane w: bioRxiv, Numer 20 December, 2022, 2022
Wydawca: Cold Spring Harbor Laboratory
DOI: 10.1101/2022.12.20.521181

Local genetic correlation analysis links depression with molecular and brain imaging endophenotypes

Autorzy: J. Werme; E.P. Tissink; S.C. de Lange; M.P. van den Heuvel; D. Posthuma; C.A. de Leeuw
Opublikowane w: medRxiv, Numer March 3, 2023, 2023
Wydawca: Cold Spring Harbor Laboratory
DOI: 10.1101/2023.03.01.23286613

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